MGE detailed information
MGE type: Prophage MGE length: 45555 bp
Accession: NZ_CP120397 Location: 2710437..2755991 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 1521-2017_CI Replicon: chromosome
Accession: NZ_CP120397 Location: 2710437..2755991 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 1521-2017_CI Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PVA76_RS13485 (PVA76_13485) | 2705875..2707247 | + | 1373 | Protein_2639 | MFS transporter | - |
| PVA76_RS13490 (PVA76_13490) | 2707295..2708176 | - | 882 | WP_000984498.1 | protease HtpX | - |
| PVA76_RS13495 (PVA76_13495) | 2708369..2710417 | - | 2049 | WP_001091235.1 | carboxy terminal-processing peptidase | - |
| PVA76_RS13500 (PVA76_13500) | 2710437..2711123 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| PVA76_RS13505 (PVA76_13505) | 2711221..2711718 | - | 498 | WP_057492764.1 | GAF domain-containing protein | - |
| PVA76_RS13510 (PVA76_13510) | 2711847..2713130 | + | 1284 | WP_001207300.1 | membrane integrity lipid transport subunit YebS | - |
| PVA76_RS13515 (PVA76_13515) | 2713099..2715732 | + | 2634 | WP_001521100.1 | Intermembrane transport protein YebT | VF |
| PVA76_RS13520 (PVA76_13520) | 2715810..2717249 | + | 1440 | WP_010989184.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PVA76_RS13525 (PVA76_13525) | 2717366..2717602 | + | 237 | WP_024131167.1 | YebV family protein | - |
| PVA76_RS13530 (PVA76_13530) | 2717713..2717904 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| PVA76_RS13535 (PVA76_13535) | 2717923..2718573 | - | 651 | WP_000986169.1 | protein-serine/threonine phosphatase | - |
| PVA76_RS13540 (PVA76_13540) | 2718797..2718961 | - | 165 | WP_001134857.1 | hypothetical protein | - |
| PVA76_RS13545 (PVA76_13545) | 2719246..2719967 | - | 722 | Protein_2651 | Guanine nucleotide exchange factor sopE2 | VF |
| PVA76_RS13550 (PVA76_13550) | 2720651..2721046 | + | 396 | WP_000422884.1 | DUF1398 domain-containing protein | - |
| PVA76_RS13555 (PVA76_13555) | 2721375..2721851 | + | 477 | WP_000030950.1 | hypothetical protein | - |
| PVA76_RS13560 (PVA76_13560) | 2722239..2722658 | - | 420 | WP_000354403.1 | GNAT family N-acetyltransferase | - |
| PVA76_RS13565 (PVA76_13565) | 2723029..2723295 | + | 267 | WP_010989185.1 | hypothetical protein | - |
| PVA76_RS13570 (PVA76_13570) | 2723464..2723604 | + | 141 | WP_031624337.1 | hypothetical protein | - |
| PVA76_RS13575 (PVA76_13575) | 2723580..2724850 | - | 1271 | Protein_2657 | IS256 family transposase ISEc39 | Transposase |
| PVA76_RS13580 (PVA76_13580) | 2724920..2725341 | + | 422 | Protein_2658 | tyrosine-type recombinase/integrase | - |
| PVA76_RS13585 (PVA76_13585) | 2726640..2727554 | + | 915 | WP_001233444.1 | DMT family transporter | - |
| PVA76_RS13590 (PVA76_13590) | 2727687..2727845 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| PVA76_RS13595 (PVA76_13595) | 2727855..2728469 | + | 615 | WP_000848063.1 | disulfide bond formation protein B | - |
| PVA76_RS13600 (PVA76_13600) | 2728878..2730857 | - | 1980 | WP_001237518.1 | alkyl sulfatase dimerization domain-containing protein | - |
| PVA76_RS13605 (PVA76_13605) | 2731253..2732383 | + | 1131 | WP_000529513.1 | GGDEF domain-containing protein | - |
| PVA76_RS13610 (PVA76_13610) | 2732669..2733064 | - | 396 | Protein_2664 | DUF977 family protein | - |
| PVA76_RS13615 (PVA76_13615) | 2733077..2733187 | - | 111 | Protein_2665 | replication protein | - |
| PVA76_RS13620 (PVA76_13620) | 2733188..2733549 | + | 362 | Protein_2666 | recombinase RecT | - |
| PVA76_RS13625 (PVA76_13625) | 2733548..2733856 | + | 309 | Protein_2667 | hypothetical protein ; Integrase | Integrase |
| - | 2733975..2734118 | + | 144 | - | - | Antitoxin Detail |
| - | 2733977..2734079 | - | 103 | - | - | Toxin Detail |
| PVA76_RS13630 (PVA76_13630) | 2734220..2734573 | - | 354 | WP_000722366.1 | YebY family protein | - |
| PVA76_RS13635 (PVA76_13635) | 2734590..2735465 | - | 876 | WP_000979693.1 | copper homeostasis membrane protein CopD | - |
| PVA76_RS13640 (PVA76_13640) | 2735466..2735840 | - | 375 | WP_001681742.1 | CopC domain-containing protein YobA | - |
| PVA76_RS13645 (PVA76_13645) | 2735978..2736208 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| PVA76_RS13650 (PVA76_13650) | 2736316..2736972 | + | 657 | WP_000100250.1 | carbon-nitrogen hydrolase family protein | - |
| PVA76_RS13655 (PVA76_13655) | 2736996..2737694 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| PVA76_RS13660 (PVA76_13660) | 2737731..2739782 | - | 2052 | WP_000936997.1 | oligopeptidase B | - |
| PVA76_RS13665 (PVA76_13665) | 2739996..2740655 | - | 660 | WP_000024713.1 | tellurite resistance TerB family protein | - |
| PVA76_RS13670 (PVA76_13670) | 2740749..2741102 | - | 354 | WP_001042123.1 | protein YebF | - |
| PVA76_RS13675 (PVA76_13675) | 2741170..2741460 | - | 291 | WP_000257728.1 | DNA damage-inducible protein YebG | - |
| PVA76_RS13680 (PVA76_13680) | 2741591..2742769 | + | 1179 | WP_000173426.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PVA76_RS13685 (PVA76_13685) | 2742869..2743510 | - | 642 | WP_000800493.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PVA76_RS13690 (PVA76_13690) | 2743548..2745359 | - | 1812 | WP_001069124.1 | phosphogluconate dehydratase | - |
| PVA76_RS13695 (PVA76_13695) | 2745594..2747069 | - | 1476 | WP_000301712.1 | glucose-6-phosphate dehydrogenase | - |
| PVA76_RS13700 (PVA76_13700) | 2747411..2748280 | + | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| PVA76_RS13705 (PVA76_13705) | 2748404..2749846 | + | 1443 | WP_000091158.1 | pyruvate kinase | - |
| PVA76_RS13710 (PVA76_13710) | 2749919..2750890 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| PVA76_RS13715 (PVA76_13715) | 2751007..2752326 | - | 1320 | WP_001184019.1 | murein DD-endopeptidase MepM | - |
| PVA76_RS13720 (PVA76_13720) | 2752342..2753286 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| PVA76_RS13725 (PVA76_13725) | 2753365..2754120 | + | 756 | WP_000203015.1 | Zinc import ATP-binding protein ZnuC | VF |
| PVA76_RS13730 (PVA76_13730) | 2754117..2754902 | + | 786 | WP_000571518.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| PVA76_RS13735 (PVA76_13735) | 2754981..2755991 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| PVA76_RS13740 (PVA76_13740) | 2756000..2756611 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| PVA76_RS13745 (PVA76_13745) | 2756971..2757663 | - | 693 | WP_000227314.1 | hypothetical protein | - |
| PVA76_RS13750 (PVA76_13750) | 2757873..2758472 | + | 600 | WP_000716741.1 | YebB family permuted papain-like enzyme | - |
| PVA76_RS13755 (PVA76_13755) | 2758474..2758995 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| PVA76_RS13760 (PVA76_13760) | 2759032..2759772 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| PVA76_RS13765 (PVA76_13765) | 2759802..2760254 | - | 453 | WP_000653696.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|