MGE detailed information
MGE type: Prophage MGE length: 45556 bp
Accession: NZ_CP120395 Location: 2750340..2795895 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 1698-2017_CI Replicon: chromosome
Accession: NZ_CP120395 Location: 2750340..2795895 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 1698-2017_CI Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PVA70_RS13825 (PVA70_13825) | 2745778..2747150 | + | 1373 | Protein_2709 | MFS transporter | - |
| PVA70_RS13830 (PVA70_13830) | 2747198..2748079 | - | 882 | WP_000984498.1 | protease HtpX | - |
| PVA70_RS13835 (PVA70_13835) | 2748272..2750320 | - | 2049 | WP_001091235.1 | carboxy terminal-processing peptidase | - |
| PVA70_RS13840 (PVA70_13840) | 2750340..2751026 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| PVA70_RS13845 (PVA70_13845) | 2751124..2751621 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| PVA70_RS13850 (PVA70_13850) | 2751750..2753033 | + | 1284 | WP_001207300.1 | membrane integrity lipid transport subunit YebS | - |
| PVA70_RS13855 (PVA70_13855) | 2753002..2755635 | + | 2634 | WP_001521100.1 | Intermembrane transport protein YebT | VF |
| PVA70_RS13860 (PVA70_13860) | 2755713..2757152 | + | 1440 | WP_031624927.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PVA70_RS13865 (PVA70_13865) | 2757270..2757506 | + | 237 | WP_024131167.1 | YebV family protein | - |
| PVA70_RS13870 (PVA70_13870) | 2757617..2757808 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| PVA70_RS13875 (PVA70_13875) | 2757827..2758477 | - | 651 | WP_000986169.1 | protein-serine/threonine phosphatase | - |
| PVA70_RS13880 (PVA70_13880) | 2758701..2758865 | - | 165 | WP_001134857.1 | hypothetical protein | - |
| PVA70_RS13885 (PVA70_13885) | 2759150..2759871 | - | 722 | Protein_2721 | Guanine nucleotide exchange factor sopE2 | VF |
| PVA70_RS13890 (PVA70_13890) | 2760555..2760950 | + | 396 | WP_000422884.1 | DUF1398 domain-containing protein | - |
| PVA70_RS13895 (PVA70_13895) | 2761279..2761755 | + | 477 | WP_000030950.1 | hypothetical protein | - |
| PVA70_RS13900 (PVA70_13900) | 2762143..2762562 | - | 420 | WP_000354403.1 | GNAT family N-acetyltransferase | - |
| PVA70_RS13905 (PVA70_13905) | 2762933..2763199 | + | 267 | WP_010989185.1 | hypothetical protein | - |
| PVA70_RS13910 (PVA70_13910) | 2763368..2763508 | + | 141 | WP_031624337.1 | hypothetical protein | - |
| PVA70_RS13915 (PVA70_13915) | 2763484..2764754 | - | 1271 | Protein_2727 | IS256 family transposase ISEc39 | Transposase |
| PVA70_RS13920 (PVA70_13920) | 2764824..2765245 | + | 422 | Protein_2728 | tyrosine-type recombinase/integrase | - |
| PVA70_RS13925 (PVA70_13925) | 2766544..2767458 | + | 915 | WP_001233444.1 | DMT family transporter | - |
| PVA70_RS13930 (PVA70_13930) | 2767591..2767749 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| PVA70_RS13935 (PVA70_13935) | 2767759..2768373 | + | 615 | WP_000848063.1 | disulfide bond formation protein B | - |
| PVA70_RS13940 (PVA70_13940) | 2768782..2770761 | - | 1980 | WP_001237518.1 | alkyl sulfatase dimerization domain-containing protein | - |
| PVA70_RS13945 (PVA70_13945) | 2771157..2772287 | + | 1131 | WP_000529513.1 | GGDEF domain-containing protein | - |
| PVA70_RS13950 (PVA70_13950) | 2772573..2772968 | - | 396 | Protein_2734 | DUF977 family protein | - |
| PVA70_RS13955 (PVA70_13955) | 2772981..2773091 | - | 111 | Protein_2735 | replication protein | - |
| PVA70_RS13960 (PVA70_13960) | 2773092..2773453 | + | 362 | Protein_2736 | recombinase RecT | - |
| PVA70_RS13965 (PVA70_13965) | 2773452..2773760 | + | 309 | Protein_2737 | hypothetical protein ; Integrase | Integrase |
| - | 2773879..2774022 | + | 144 | - | - | Antitoxin Detail |
| - | 2773881..2773983 | - | 103 | - | - | Toxin Detail |
| PVA70_RS13970 (PVA70_13970) | 2774124..2774477 | - | 354 | WP_000722366.1 | YebY family protein | - |
| PVA70_RS13975 (PVA70_13975) | 2774494..2775369 | - | 876 | WP_000979693.1 | copper homeostasis membrane protein CopD | - |
| PVA70_RS13980 (PVA70_13980) | 2775370..2775744 | - | 375 | WP_001681742.1 | CopC domain-containing protein YobA | - |
| PVA70_RS13985 (PVA70_13985) | 2775882..2776112 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| PVA70_RS13990 (PVA70_13990) | 2776220..2776876 | + | 657 | WP_000100250.1 | carbon-nitrogen hydrolase family protein | - |
| PVA70_RS13995 (PVA70_13995) | 2776900..2777598 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| PVA70_RS14000 (PVA70_14000) | 2777635..2779686 | - | 2052 | WP_000936997.1 | oligopeptidase B | - |
| PVA70_RS14005 (PVA70_14005) | 2779900..2780559 | - | 660 | WP_000024713.1 | tellurite resistance TerB family protein | - |
| PVA70_RS14010 (PVA70_14010) | 2780653..2781006 | - | 354 | WP_001042123.1 | protein YebF | - |
| PVA70_RS14015 (PVA70_14015) | 2781074..2781364 | - | 291 | WP_000257728.1 | DNA damage-inducible protein YebG | - |
| PVA70_RS14020 (PVA70_14020) | 2781495..2782673 | + | 1179 | WP_000173426.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PVA70_RS14025 (PVA70_14025) | 2782773..2783414 | - | 642 | WP_000800493.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PVA70_RS14030 (PVA70_14030) | 2783452..2785263 | - | 1812 | WP_001069124.1 | phosphogluconate dehydratase | - |
| PVA70_RS14035 (PVA70_14035) | 2785498..2786973 | - | 1476 | WP_000301712.1 | glucose-6-phosphate dehydrogenase | - |
| PVA70_RS14040 (PVA70_14040) | 2787315..2788184 | + | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| PVA70_RS14045 (PVA70_14045) | 2788308..2789750 | + | 1443 | WP_031624930.1 | pyruvate kinase | - |
| PVA70_RS14050 (PVA70_14050) | 2789823..2790794 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| PVA70_RS14055 (PVA70_14055) | 2790911..2792230 | - | 1320 | WP_001184019.1 | murein DD-endopeptidase MepM | - |
| PVA70_RS14060 (PVA70_14060) | 2792246..2793190 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| PVA70_RS14065 (PVA70_14065) | 2793269..2794024 | + | 756 | WP_000203015.1 | Zinc import ATP-binding protein ZnuC | VF |
| PVA70_RS14070 (PVA70_14070) | 2794021..2794806 | + | 786 | WP_000571518.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| PVA70_RS14075 (PVA70_14075) | 2794885..2795895 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| PVA70_RS14080 (PVA70_14080) | 2795904..2796515 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| PVA70_RS14085 (PVA70_14085) | 2796875..2797567 | - | 693 | WP_000227314.1 | hypothetical protein | - |
| PVA70_RS14090 (PVA70_14090) | 2797777..2798376 | + | 600 | WP_000716741.1 | YebB family permuted papain-like enzyme | - |
| PVA70_RS14095 (PVA70_14095) | 2798378..2798899 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| PVA70_RS14100 (PVA70_14100) | 2798936..2799676 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| PVA70_RS14105 (PVA70_14105) | 2799706..2800158 | - | 453 | WP_000653696.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|