MGE detailed information
MGE type: Genomic_island MGE length: 8770 bp
Accession: NZ_CP120392 Location: 973821..982590 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 2027-2019_CO_04_Copr1 Replicon: chromosome
Accession: NZ_CP120392 Location: 973821..982590 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 2027-2019_CO_04_Copr1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PVA84_RS04730 (PVA84_04730) | 969248..971815 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| PVA84_RS04735 (PVA84_04735) | 971973..972493 | + | 521 | Protein_928 | cytoplasmic protein | - |
| PVA84_RS04740 (PVA84_04740) | 972663..973319 | - | 657 | WP_000420463.1 | protein-serine/threonine phosphatase | - |
| PVA84_RS04745 (PVA84_04745) | 973546..973967 | + | 422 | Protein_930 | IS5/IS1182 family transposase | - |
| PVA84_RS04750 (PVA84_04750) | 974040..974567 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PVA84_RS04755 (PVA84_04755) | 974564..974854 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PVA84_RS04760 (PVA84_04760) | 975124..975324 | - | 201 | Protein_933 | transposase | - |
| PVA84_RS04765 (PVA84_04765) | 975728..976171 | - | 444 | WP_000715096.1 | Type 3 secretion system pilotin | VF |
| PVA84_RS04770 (PVA84_04770) | 976627..977277 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| PVA84_RS04775 (PVA84_04775) | 977274..978962 | + | 1689 | WP_000848103.1 | Type 3 secretion system secretin | VF |
| PVA84_RS04780 (PVA84_04780) | 978959..980077 | + | 1119 | WP_000612166.1 | Protein MxiC | VF |
| PVA84_RS04785 (PVA84_04785) | 980102..982159 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| PVA84_RS04790 (PVA84_04790) | 982183..982590 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| PVA84_RS04795 (PVA84_04795) | 982587..983882 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| PVA84_RS04800 (PVA84_04800) | 983860..984303 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| PVA84_RS04805 (PVA84_04805) | 984303..985313 | + | 1011 | WP_000503113.1 | SPI-1 type III secretion system protein SpaN | - |
| PVA84_RS04810 (PVA84_04810) | 985313..986224 | + | 912 | WP_000058738.1 | SPI-1 type III secretion system protein SpaO | - |
| PVA84_RS04815 (PVA84_04815) | 986214..986888 | + | 675 | WP_000526019.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| PVA84_RS04820 (PVA84_04820) | 986914..987174 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|