MGE detailed information
MGE type: Genomic_island MGE length: 16152 bp
Accession: NZ_CP120392 Location: 813428..829579 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 2027-2019_CO_04_Copr1 Replicon: chromosome
Accession: NZ_CP120392 Location: 813428..829579 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 2027-2019_CO_04_Copr1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PVA84_RS03965 (PVA84_03965) | 808568..809666 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| PVA84_RS03970 (PVA84_03970) | 809676..811193 | + | 1518 | WP_000003338.1 | lysine--tRNA ligase | - |
| PVA84_RS03975 (PVA84_03975) | 811269..811814 | - | 546 | WP_000133998.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PVA84_RS03980 (PVA84_03980) | 812079..812837 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PVA84_RS03990 (PVA84_03990) | 813125..814744 | + | 1620 | WP_014341476.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PVA84_RS03995 (PVA84_03995) | 815680..816399 | + | 720 | WP_000082599.1 | Rha family transcriptional regulator | - |
| PVA84_RS04000 (PVA84_04000) | 816403..816606 | + | 204 | WP_000184036.1 | hypothetical protein | - |
| PVA84_RS04005 (PVA84_04005) | 816689..817144 | + | 456 | WP_223229661.1 | hypothetical protein | - |
| PVA84_RS04010 (PVA84_04010) | 817246..818367 | + | 1122 | WP_000028980.1 | hypothetical protein | - |
| PVA84_RS04015 (PVA84_04015) | 819000..819806 | - | 807 | WP_077905073.1 | DUF1460 domain-containing protein | - |
| PVA84_RS04020 (PVA84_04020) | 820081..820332 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| PVA84_RS04025 (PVA84_04025) | 820509..820736 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PVA84_RS04030 (PVA84_04030) | 820736..821134 | + | 399 | WP_000911334.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PVA84_RS04035 (PVA84_04035) | 821941..822477 | + | 537 | WP_001038500.1 | Attachment invasion locus protein | VF |
| PVA84_RS04040 (PVA84_04040) | 822524..823156 | + | 633 | WP_000835268.1 | YfdX family protein | - |
| PVA84_RS04045 (PVA84_04045) | 823875..824456 | + | 582 | WP_001244646.1 | putative fimbrial-like protein YbgD | VF |
| PVA84_RS04050 (PVA84_04050) | 824576..827065 | + | 2490 | WP_000705516.1 | Outer membrane usher protein PapC | VF |
| PVA84_RS04055 (PVA84_04055) | 827106..827849 | + | 744 | WP_000798497.1 | Chaperone protein PapD | VF |
| PVA84_RS04060 (PVA84_04060) | 827846..828922 | + | 1077 | WP_000141334.1 | hypothetical protein | - |
| PVA84_RS04065 (PVA84_04065) | 829067..829579 | + | 513 | WP_000336256.1 | CaiF/GrlA family transcriptional regulator | - |
| PVA84_RS04070 (PVA84_04070) | 829566..830324 | + | 759 | WP_000134788.1 | transcriptional regulator | - |
| PVA84_RS04075 (PVA84_04075) | 830534..831394 | - | 861 | Protein_798 | nickel/cobalt efflux protein RcnA | - |
| PVA84_RS04080 (PVA84_04080) | 831516..831788 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PVA84_RS04085 (PVA84_04085) | 831819..833048 | - | 1230 | WP_000036836.1 | amino acid permease | - |
| PVA84_RS04090 (PVA84_04090) | 833190..833645 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|