MGE detailed information
MGE type: Genomic_island MGE length: 34830 bp
Accession: NZ_CP120343 Location: 3712003..3746832 Organism: Salmonella enterica subsp. enterica serovar Paratyphi B strain PS_Mu_4_2021 Replicon: chromosome
Accession: NZ_CP120343 Location: 3712003..3746832 Organism: Salmonella enterica subsp. enterica serovar Paratyphi B strain PS_Mu_4_2021 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1708_RS18400 () | 3707559..3710003 | + | 2445 | WP_020437328.1 | acyl-CoA dehydrogenase FadE | - |
| P1708_RS18405 () | 3710112..3710879 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| P1708_RS18410 () | 3711250..3711657 | + | 408 | WP_001622793.1 | Spy/CpxP family protein refolding chaperone | - |
| P1708_RS18415 () | 3712003..3712722 | + | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| P1708_RS18420 () | 3712726..3712941 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| P1708_RS18425 () | 3713061..3714008 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| P1708_RS18430 () | 3714500..3714740 | - | 241 | Protein_3608 | PerC family transcriptional regulator | - |
| P1708_RS18435 () | 3714823..3715637 | - | 815 | Protein_3609 | polysaccharide deacetylase family protein | - |
| P1708_RS18440 () | 3716045..3716515 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| P1708_RS18445 () | 3716537..3719047 | - | 2511 | WP_000669317.1 | F1 capsule-anchoring protein | VF |
| P1708_RS18450 () | 3719071..3719808 | - | 738 | WP_023197904.1 | Chaperone protein caf1M | VF |
| P1708_RS18455 () | 3719885..3720382 | - | 498 | WP_000789570.1 | hypothetical protein | - |
| P1708_RS18460 () | 3720515..3720676 | - | 162 | WP_277623256.1 | hypothetical protein | - |
| P1708_RS18465 () | 3720669..3721010 | - | 342 | WP_277623257.1 | hypothetical protein | - |
| P1708_RS18470 () | 3721779..3722480 | - | 702 | Protein_3616 | integrase core domain-containing protein | - |
| P1708_RS18475 () | 3722533..3722781 | + | 249 | WP_077906239.1 | SymE family type I addiction module toxin | - |
| P1708_RS18480 () | 3722913..3723191 | - | 279 | WP_077906242.1 | hypothetical protein | - |
| - | 3723474..3723896 | - | 423 | - | - | Antitoxin Detail |
| P1708_RS18485 () | 3723631..3723906 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| P1708_RS18490 () | 3723959..3724369 | - | 411 | WP_001286802.1 | immunity 26/phosphotriesterase HocA family protein | - |
| P1708_RS18495 () | 3724888..3725334 | - | 447 | WP_000935097.1 | protein SciX | - |
| P1708_RS18500 () | 3725328..3729407 | - | 4080 | WP_021294406.1 | polymorphic toxin type 47 domain-containing protein | - |
| P1708_RS18505 () | 3729426..3729872 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
| P1708_RS18510 () | 3729896..3732085 | - | 2190 | WP_020437323.1 | hypothetical protein | VF |
| P1708_RS18515 () | 3732482..3733003 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| P1708_RS18520 () | 3733027..3733443 | - | 417 | WP_000759645.1 | DUF2195 family protein | - |
| P1708_RS18525 () | 3733440..3733535 | - | 96 | Protein_3627 | cytoplasmic protein | - |
| P1708_RS18530 () | 3733571..3734032 | - | 462 | WP_001674711.1 | hypothetical protein | - |
| P1708_RS18535 () | 3734017..3734487 | - | 471 | WP_021294407.1 | glucosaminidase domain-containing protein | - |
| P1708_RS18540 () | 3734530..3735297 | - | 768 | WP_023197902.1 | TagF domain-containing protein | - |
| P1708_RS18545 () | 3735297..3739166 | - | 3870 | WP_023197901.1 | hypothetical protein | VF |
| P1708_RS18550 () | 3739200..3739631 | - | 432 | WP_023166851.1 | putative Shiga-like toxin A subunit | - |
| P1708_RS18555 () | 3739833..3740606 | - | 774 | WP_023197900.1 | Rap1a/Tai family immunity protein | - |
| P1708_RS18560 () | 3740611..3741915 | - | 1305 | WP_000132479.1 | Peptidoglycan-associated lipoprotein | VF |
| P1708_RS18565 () | 3741912..3743255 | - | 1344 | WP_000118732.1 | hypothetical protein | VF |
| P1708_RS18570 () | 3743259..3743795 | - | 537 | WP_023197899.1 | hypothetical protein | VF |
| P1708_RS18575 () | 3743862..3744347 | - | 486 | WP_000119443.1 | Protein hcp1 | VF |
| P1708_RS18580 () | 3744490..3744873 | - | 384 | WP_021294410.1 | type VI secretion system amidase immunity protein Tai4 | - |
| P1708_RS18585 () | 3744858..3745343 | - | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| P1708_RS18590 () | 3745386..3745579 | - | 194 | Protein_3640 | type VI secretion system lipoprotein TssJ | - |
| P1708_RS18595 () | 3745647..3746132 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| P1708_RS18600 () | 3746386..3746718 | - | 333 | WP_077905251.1 | hypothetical protein | - |
| P1708_RS18605 () | 3746845..3746955 | - | 111 | WP_077909244.1 | BPSL0067 family protein | - |
| P1708_RS18610 () | 3747018..3748526 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| P1708_RS18615 () | 3748550..3749092 | - | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| P1708_RS18620 () | 3749192..3751831 | - | 2640 | WP_023197897.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|