MGE detailed information
MGE type: Genomic_island MGE length: 45750 bp
Accession: NZ_CP119980 Location: 886397..932146 Organism: Salmonella enterica strain CRIN525628 Replicon: chromosome
Accession: NZ_CP119980 Location: 886397..932146 Organism: Salmonella enterica strain CRIN525628 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P2V98_RS04120 () | 883897..884439 | + | 543 | WP_023994002.1 | type VI secretion system contractile sheath small subunit | - |
| P2V98_RS04125 () | 884463..885971 | + | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| P2V98_RS04130 () | 886024..886425 | + | 402 | WP_001147175.1 | BPSL0067 family protein | - |
| P2V98_RS04135 () | 886397..886822 | + | 426 | WP_001171576.1 | hypothetical protein | - |
| P2V98_RS04140 () | 887059..887544 | + | 486 | WP_000312802.1 | Protein hcp1 | VF |
| P2V98_RS04145 () | 887611..887805 | + | 195 | Protein_800 | type VI secretion system lipoprotein TssJ | - |
| P2V98_RS04150 () | 887848..888333 | + | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| P2V98_RS04155 () | 888318..888701 | + | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| P2V98_RS04160 () | 888844..889329 | + | 486 | WP_000119443.1 | Protein hcp1 | VF |
| P2V98_RS04165 () | 889396..889932 | + | 537 | WP_020898423.1 | hypothetical protein | VF |
| P2V98_RS04170 () | 889936..891279 | + | 1344 | WP_000118732.1 | hypothetical protein | VF |
| P2V98_RS04175 () | 891276..892580 | + | 1305 | WP_000132483.1 | Peptidoglycan-associated lipoprotein | VF |
| P2V98_RS04180 () | 892585..893358 | + | 774 | WP_023993999.1 | Rap1a/Tai family immunity protein | - |
| P2V98_RS04185 () | 893560..893991 | + | 432 | WP_023166851.1 | putative Shiga-like toxin A subunit | - |
| P2V98_RS04190 () | 894025..897894 | + | 3870 | WP_023993998.1 | hypothetical protein | VF |
| P2V98_RS04195 () | 897894..898661 | + | 768 | WP_023993997.1 | TagF domain-containing protein | - |
| P2V98_RS04200 () | 898704..899174 | + | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| P2V98_RS04205 () | 899159..899620 | + | 462 | WP_001684272.1 | hypothetical protein | - |
| P2V98_RS04210 () | 899656..899751 | + | 96 | Protein_813 | hypothetical protein | - |
| P2V98_RS04215 () | 899748..900164 | + | 417 | WP_000759642.1 | DUF2195 family protein | - |
| P2V98_RS04220 () | 900188..900709 | + | 522 | WP_023994364.1 | DUF2778 domain-containing protein | - |
| P2V98_RS04225 () | 901106..903337 | + | 2232 | WP_023993996.1 | hypothetical protein | VF |
| P2V98_RS04230 () | 903397..903855 | + | 459 | WP_023993995.1 | DcrB-related protein | - |
| P2V98_RS04235 () | 903871..908613 | + | 4743 | WP_023993994.1 | RHS repeat-associated core domain-containing protein | - |
| P2V98_RS04240 () | 908610..908954 | + | 345 | WP_023218822.1 | hypothetical protein | - |
| P2V98_RS04245 () | 909021..909278 | - | 258 | WP_023243487.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 909103..909435 | + | 333 | - | - | Antitoxin Detail |
| P2V98_RS04250 () | 909612..909905 | + | 294 | WP_039515457.1 | hypothetical protein | - |
| P2V98_RS04255 () | 910723..911190 | + | 468 | WP_000828178.1 | sugar tyrosine-protein kinase | - |
| P2V98_RS04260 () | 911507..911785 | + | 279 | WP_077677834.1 | hypothetical protein | - |
| P2V98_RS04265 () | 911852..912166 | - | 315 | WP_023892102.1 | SymE family type I addiction module toxin | - |
| P2V98_RS04270 () | 912219..912920 | + | 702 | Protein_825 | integrase core domain-containing protein | - |
| P2V98_RS04275 () | 913619..914182 | + | 564 | WP_023993992.1 | Saf-pilin pilus formation protein SafA | - |
| P2V98_RS04280 () | 914257..914997 | + | 741 | WP_023204745.1 | Chaperone protein caf1M | VF |
| P2V98_RS04285 () | 915021..917531 | + | 2511 | WP_023993991.1 | F1 capsule-anchoring protein | VF |
| P2V98_RS04290 () | 917553..918023 | + | 471 | WP_000266939.1 | AfaD family invasin | - |
| P2V98_RS04295 () | 918431..919252 | + | 822 | WP_023994368.1 | polysaccharide deacetylase family protein | - |
| P2V98_RS04300 () | 919335..919575 | + | 241 | Protein_831 | PerC family transcriptional regulator | - |
| P2V98_RS04305 () | 920069..921016 | + | 948 | WP_023993811.1 | LysR family transcriptional regulator | - |
| P2V98_RS04310 () | 921136..921255 | + | 120 | Protein_833 | hypothetical protein | - |
| P2V98_RS04315 () | 921336..921522 | + | 187 | Protein_834 | IS3 family transposase IS1351 | Transposase |
| P2V98_RS04320 () | 921562..922119 | - | 558 | Protein_835 | IS21 family transposase ISEc62 | Transposase |
| P2V98_RS04325 () | 923155..923865 | + | 711 | WP_001009508.1 | hypothetical protein | VF |
| P2V98_RS04330 () | 923973..924491 | + | 519 | WP_001056552.1 | CFA/I fimbrial subunit B | VF |
| P2V98_RS04335 () | 924600..927287 | + | 2688 | WP_023993810.1 | hypothetical protein | VF |
| P2V98_RS04340 () | 927310..928389 | + | 1080 | WP_000066479.1 | fimbrial protein TcfD | - |
| P2V98_RS04345 () | 928522..928869 | + | 348 | WP_023993809.1 | Lrp/AsnC family transcriptional regulator | - |
| P2V98_RS04350 () | 929109..929726 | + | 618 | WP_000241747.1 | protein TioA | - |
| P2V98_RS04355 () | 930328..930461 | - | 134 | Protein_842 | transposase | - |
| P2V98_RS04360 () | 930497..930685 | + | 189 | WP_031603649.1 | hypothetical protein | - |
| P2V98_RS04365 () | 930689..931408 | - | 720 | WP_000787601.1 | Outer membrane protein PagN | VF |
| P2V98_RS04370 () | 931739..932146 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| P2V98_RS04375 () | 932456..933223 | - | 768 | WP_023993808.1 | amidohydrolase | - |
| P2V98_RS04380 () | 933332..935776 | - | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| P2V98_RS04385 () | 936016..936594 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|