MGE detailed information
MGE type: Genomic_island MGE length: 31678 bp
Accession: NZ_CP119773 Location: 3284322..3315999 Organism: Dickeya fangzhongdai strain ZXC1 Replicon: chromosome
Accession: NZ_CP119773 Location: 3284322..3315999 Organism: Dickeya fangzhongdai strain ZXC1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQ617_RS14575 (PQ617_14575) | 3279689..3280525 | + | 837 | WP_121479923.1 | transporter substrate-binding domain-containing protein | - |
| PQ617_RS14580 (PQ617_14580) | 3280529..3281218 | + | 690 | WP_038918472.1 | 5-oxoprolinase subunit PxpB | - |
| PQ617_RS14585 (PQ617_14585) | 3281215..3282186 | + | 972 | WP_239788857.1 | biotin-dependent carboxyltransferase family protein | - |
| PQ617_RS14590 (PQ617_14590) | 3282204..3282974 | + | 771 | WP_038668683.1 | 5-oxoprolinase subunit PxpA | - |
| PQ617_RS14595 (PQ617_14595) | 3283043..3284332 | - | 1290 | WP_161130586.1 | HipA domain-containing protein | - |
| PQ617_RS14600 (PQ617_14600) | 3284322..3284660 | - | 339 | WP_038918474.1 | helix-turn-helix transcriptional regulator | - |
| PQ617_RS14605 (PQ617_14605) | 3284900..3286102 | - | 1203 | WP_276196140.1 | pyridoxal phosphate-dependent aminotransferase | - |
| PQ617_RS14610 (PQ617_14610) | 3286447..3287370 | + | 924 | WP_038660277.1 | nitrogen assimilation transcriptional regulator NAC | - |
| PQ617_RS14615 (PQ617_14615) | 3287479..3287910 | + | 432 | WP_276196141.1 | biotin/lipoyl-containing protein | - |
| PQ617_RS14620 (PQ617_14620) | 3288033..3288785 | + | 753 | WP_276196142.1 | SDR family oxidoreductase | - |
| PQ617_RS14625 (PQ617_14625) | 3288808..3289503 | + | 696 | WP_276196143.1 | amino acid ABC transporter permease | - |
| PQ617_RS14630 (PQ617_14630) | 3289509..3290279 | + | 771 | WP_049854970.1 | amino acid ABC transporter permease | - |
| PQ617_RS14635 (PQ617_14635) | 3290276..3291010 | + | 735 | WP_107758987.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| PQ617_RS14640 (PQ617_14640) | 3291383..3292216 | - | 834 | WP_276196144.1 | HNH endonuclease | - |
| PQ617_RS14645 (PQ617_14645) | 3292589..3292996 | - | 408 | WP_276196145.1 | very short patch repair endonuclease | - |
| PQ617_RS14650 (PQ617_14650) | 3293094..3298934 | - | 5841 | WP_276196146.1 | DEAD/DEAH box helicase | - |
| PQ617_RS14655 (PQ617_14655) | 3298954..3301041 | - | 2088 | WP_276196147.1 | hypothetical protein | - |
| PQ617_RS14660 (PQ617_14660) | 3301054..3303615 | - | 2562 | WP_276196148.1 | hypothetical protein | - |
| PQ617_RS14665 (PQ617_14665) | 3303612..3304847 | - | 1236 | WP_276196149.1 | DNA cytosine methyltransferase | - |
| PQ617_RS14670 (PQ617_14670) | 3305128..3306150 | + | 1023 | WP_210182511.1 | DUF4917 family protein | - |
| PQ617_RS14675 (PQ617_14675) | 3306802..3307743 | + | 942 | Protein_2846 | zincin-like metallopeptidase domain-containing protein | - |
| PQ617_RS14680 (PQ617_14680) | 3308067..3308303 | + | 237 | WP_110372302.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PQ617_RS14685 (PQ617_14685) | 3308306..3308620 | + | 315 | WP_276196150.1 | CcdB family protein | Toxin Detail |
| PQ617_RS14690 (PQ617_14690) | 3308623..3309372 | + | 750 | WP_276196151.1 | hypothetical protein | - |
| PQ617_RS14695 (PQ617_14695) | 3309586..3310437 | - | 852 | WP_276196153.1 | hypothetical protein | - |
| PQ617_RS14700 (PQ617_14700) | 3310431..3312185 | - | 1755 | WP_276196154.1 | ATP-binding protein | - |
| PQ617_RS14705 (PQ617_14705) | 3312656..3313393 | + | 738 | WP_276196155.1 | hypothetical protein | - |
| PQ617_RS14710 (PQ617_14710) | 3313663..3314733 | + | 1071 | WP_276196156.1 | hypothetical protein | - |
| PQ617_RS14715 (PQ617_14715) | 3315214..3315999 | + | 786 | WP_276196157.1 | hypothetical protein | - |
| PQ617_RS14725 (PQ617_14725) | 3316512..3317399 | - | 888 | WP_276196158.1 | hypothetical protein | - |
| PQ617_RS14730 (PQ617_14730) | 3317692..3318438 | - | 747 | WP_276196159.1 | MobC family replication-relaxation protein | - |
| PQ617_RS14735 (PQ617_14735) | 3318447..3320210 | - | 1764 | WP_276196160.1 | type IV secretion system DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|