MGE detailed information
MGE type: Genomic_island MGE length: 19910 bp
Accession: NZ_CP119773 Location: 2584944..2604853 Organism: Dickeya fangzhongdai strain ZXC1 Replicon: chromosome
Accession: NZ_CP119773 Location: 2584944..2604853 Organism: Dickeya fangzhongdai strain ZXC1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQ617_RS11585 (PQ617_11585) | 2581163..2582629 | + | 1467 | WP_038918015.1 | TolC family protein | - |
| PQ617_RS11590 (PQ617_11590) | 2582622..2583914 | + | 1293 | WP_049854432.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| PQ617_RS11595 (PQ617_11595) | 2584074..2584601 | - | 528 | WP_038918018.1 | 50S ribosome-binding GTPase | - |
| PQ617_RS11600 (PQ617_11600) | 2584944..2585588 | - | 645 | WP_049842533.1 | hypothetical protein | - |
| PQ617_RS11605 (PQ617_11605) | 2585663..2586331 | - | 669 | WP_276195632.1 | DUF1906 domain-containing protein | - |
| PQ617_RS11610 (PQ617_11610) | 2586577..2587713 | - | 1137 | WP_038918025.1 | linear amide C-N hydrolase | - |
| PQ617_RS11615 (PQ617_11615) | 2588372..2589475 | - | 1104 | WP_276195633.1 | hypothetical protein | - |
| PQ617_RS11620 (PQ617_11620) | 2589712..2590012 | - | 301 | Protein_2249 | IS3 family transposase ISEhe3 | Transposase |
| PQ617_RS11625 (PQ617_11625) | 2590115..2591524 | - | 1410 | WP_276195635.1 | MATE family efflux transporter | - |
| PQ617_RS11630 (PQ617_11630) | 2591557..2593038 | - | 1482 | WP_276195637.1 | Outer membrane protein OprM | VF |
| PQ617_RS11635 (PQ617_11635) | 2593163..2593780 | + | 618 | WP_276195639.1 | hypothetical protein | VF |
| PQ617_RS11640 (PQ617_11640) | 2593875..2594987 | + | 1113 | WP_276195641.1 | efflux RND transporter periplasmic adaptor subunit | - |
| PQ617_RS11645 (PQ617_11645) | 2594984..2598046 | + | 3063 | WP_276195643.1 | efflux RND transporter permease subunit | - |
| PQ617_RS11650 (PQ617_11650) | 2598092..2598898 | + | 807 | WP_276195645.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| PQ617_RS11655 (PQ617_11655) | 2599137..2599309 | + | 173 | Protein_2256 | GNAT family N-acetyltransferase | - |
| PQ617_RS11660 (PQ617_11660) | 2599383..2600494 | + | 1112 | WP_276195647.1 | IS3 family transposase IS1400 | Transposase |
| PQ617_RS11665 (PQ617_11665) | 2601167..2602399 | - | 1233 | WP_276195649.1 | hypothetical protein | - |
| PQ617_RS11670 (PQ617_11670) | 2602789..2603094 | - | 306 | WP_276195650.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| PQ617_RS11675 (PQ617_11675) | 2603097..2603315 | - | 219 | WP_276195651.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| PQ617_RS11680 (PQ617_11680) | 2603374..2604117 | - | 744 | WP_276195652.1 | MobC family replication-relaxation protein | - |
| PQ617_RS11685 (PQ617_11685) | 2605020..2605370 | - | 351 | WP_276195653.1 | hypothetical protein | - |
| PQ617_RS11690 (PQ617_11690) | 2605557..2605751 | + | 195 | WP_019844359.1 | YlcI/YnfO family protein | - |
| PQ617_RS11695 (PQ617_11695) | 2605857..2607116 | - | 1260 | WP_276195654.1 | integrase arm-type DNA-binding domain-containing protein | - |
| PQ617_RS11700 (PQ617_11700) | 2607497..2609728 | - | 2232 | WP_276195655.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|