MGE detailed information
MGE type: IScluster/Tn MGE length: 27697 bp
Accession: NZ_CP119745 Location: 35391..63087 Organism: Escherichia coli strain E94 Replicon: plasmid pE94-5
Accession: NZ_CP119745 Location: 35391..63087 Organism: Escherichia coli strain E94 Replicon: plasmid pE94-5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1J23_RS28860 (P1J23_28860) | 30500..31186 | - | 687 | WP_001031857.1 | fimbrial chaperone | - |
| P1J23_RS28865 (P1J23_28865) | 31179..33563 | - | 2385 | WP_276171340.1 | PefC/AfrB family outer membrane usher protein | - |
| P1J23_RS28870 (P1J23_28870) | 33597..34139 | - | 543 | WP_169030132.1 | type 1 fimbrial protein | - |
| P1J23_RS28875 (P1J23_28875) | 34282..34542 | - | 261 | WP_032215356.1 | adhesin biosynthesis transcription regulatory family protein | - |
| P1J23_RS28880 (P1J23_28880) | 34655..34936 | - | 282 | WP_001375145.1 | K99 fimbria transcriptional regulator FanA | - |
| P1J23_RS28885 (P1J23_28885) | 35391..36745 | - | 1355 | Protein_52 | IS66 family transposase ISSgsp1 | Transposase |
| P1J23_RS28890 (P1J23_28890) | 36951..37139 | - | 189 | Protein_53 | IS66 family transposase ISEc8 | Transposase |
| P1J23_RS28895 (P1J23_28895) | 37189..37536 | - | 348 | WP_042922210.1 | IS66 family transposase ISEc8 | Transposase |
| P1J23_RS28900 (P1J23_28900) | 37533..37934 | - | 402 | WP_276171357.1 | IS66 family transposase ISCfr14 | Transposase |
| P1J23_RS28905 (P1J23_28905) | 38010..38138 | + | 129 | Protein_56 | IS3 family transposase | - |
| P1J23_RS28910 (P1J23_28910) | 38459..38686 | - | 228 | Protein_57 | YaiO family outer membrane beta-barrel protein | - |
| P1J23_RS28915 (P1J23_28915) | 38760..39457 | + | 698 | WP_276171339.1 | IS1 family transposase IS1S | Transposase |
| P1J23_RS28920 (P1J23_28920) | 39595..39879 | + | 285 | WP_169030186.1 | hypothetical protein | - |
| P1J23_RS28925 (P1J23_28925) | 39966..40181 | - | 216 | WP_063854922.1 | hypothetical protein | - |
| P1J23_RS28930 (P1J23_28930) | 40504..41127 | - | 624 | Protein_61 | IS3 family transposase IS2 | Transposase |
| P1J23_RS28935 (P1J23_28935) | 41279..41641 | + | 363 | WP_236448463.1 | IS66 family transposase IS682 | Transposase |
| P1J23_RS28940 (P1J23_28940) | 41638..41988 | + | 351 | WP_000624720.1 | IS66 family transposase ISEc23 | Transposase |
| P1J23_RS28945 (P1J23_28945) | 42019..43632 | + | 1614 | WP_276171338.1 | IS66 family transposase ISEc23 | Transposase |
| P1J23_RS28950 (P1J23_28950) | 43664..43954 | - | 291 | Protein_65 | IS3 family transposase IS1203 | Transposase |
| P1J23_RS28955 (P1J23_28955) | 44145..45373 | + | 1229 | WP_276171337.1 | IS3 family transposase IS2 | Transposase |
| P1J23_RS28960 (P1J23_28960) | 45584..46402 | + | 819 | WP_096216232.1 | helix-turn-helix transcriptional regulator | - |
| P1J23_RS28965 (P1J23_28965) | 46455..47294 | - | 840 | WP_096216231.1 | HTH-type transcriptional activator RhaR | VF |
| P1J23_RS28970 (P1J23_28970) | 47723..48088 | - | 366 | WP_169030166.1 | PapG chaperone-binding domain-containing protein | - |
| P1J23_RS28975 (P1J23_28975) | 48141..48743 | - | 603 | Protein_70 | IS3 family transposase IS2 | Transposase |
| P1J23_RS28980 (P1J23_28980) | 48825..49190 | + | 366 | WP_000124096.1 | hypothetical protein | - |
| P1J23_RS28985 (P1J23_28985) | 49190..50377 | + | 1188 | WP_276171320.1 | IS91 family transposase IS91 | Transposase |
| P1J23_RS28990 (P1J23_28990) | 50561..51198 | - | 638 | Protein_73 | IS3 family transposase IS2 | Transposase |
| P1J23_RS28995 (P1J23_28995) | 51290..51613 | + | 324 | Protein_74 | IS3 family transposase IS2 | Transposase |
| P1J23_RS29000 (P1J23_29000) | 51719..51856 | - | 138 | WP_169030146.1 | hypothetical protein | - |
| P1J23_RS29005 (P1J23_29005) | 51998..52363 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| P1J23_RS29010 (P1J23_29010) | 52363..53550 | + | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| P1J23_RS29015 (P1J23_29015) | 53773..54045 | + | 273 | WP_011310366.1 | hypothetical protein | - |
| P1J23_RS29020 (P1J23_29020) | 54026..55234 | + | 1209 | WP_169030147.1 | IS91 family transposase ISSbo1 | Transposase |
| P1J23_RS29025 (P1J23_29025) | 55680..55931 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| P1J23_RS29030 (P1J23_29030) | 55928..56215 | + | 288 | WP_169030134.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| P1J23_RS29035 (P1J23_29035) | 56217..56495 | + | 279 | Protein_82 | integrase core domain-containing protein | - |
| P1J23_RS29040 (P1J23_29040) | 56398..56736 | + | 339 | WP_236448435.1 | hypothetical protein | - |
| P1J23_RS29045 (P1J23_29045) | 57145..58122 | + | 978 | WP_000361618.1 | RepB family plasmid replication initiator protein | - |
| P1J23_RS29050 (P1J23_29050) | 58359..59095 | - | 737 | Protein_85 | tyrosine-type recombinase/integrase | - |
| P1J23_RS29055 (P1J23_29055) | 59269..59706 | - | 438 | WP_169030135.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| P1J23_RS29060 (P1J23_29060) | 59731..59913 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| P1J23_RS29065 (P1J23_29065) | 60188..60700 | - | 513 | Protein_88 | IS3 family transposase IS2 | Transposase |
| P1J23_RS29070 (P1J23_29070) | 60745..61713 | + | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| P1J23_RS29075 (P1J23_29075) | 61858..63087 | + | 1230 | Protein_90 | IS3 family transposase IS2 | Transposase |
| P1J23_RS29080 (P1J23_29080) | 63349..63864 | + | 516 | WP_096216223.1 | toxin-activating lysine-acyltransferase | - |
| P1J23_RS29085 (P1J23_29085) | 63873..66845 | + | 2973 | WP_219394493.1 | RTX family hemolysin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|