MGE detailed information
MGE type: Conjugative plasmid MGE length: 99623 bp
Accession: NZ_CP119744 Location: 1..99623 Organism: Escherichia coli strain E94 Replicon: plasmid pE94-4
Accession: NZ_CP119744 Location: 1..99623 Organism: Escherichia coli strain E94 Replicon: plasmid pE94-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1J23_RS28005 (P1J23_28005) | 1..380 | + | 380 | Protein_0 | IS1 family transposase IS1S | Transposase |
| P1J23_RS28010 (P1J23_28010) | 487..921 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| P1J23_RS28015 (P1J23_28015) | 993..1343 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| P1J23_RS28020 (P1J23_28020) | 1357..1632 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| P1J23_RS28025 (P1J23_28025) | 1668..2090 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| P1J23_RS28030 (P1J23_28030) | 2142..3836 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| P1J23_RS28035 (P1J23_28035) | 3854..4216 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| P1J23_RS28040 (P1J23_28040) | 4213..4449 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| P1J23_RS28045 (P1J23_28045) | 4485..5153 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| P1J23_RS28050 (P1J23_28050) | 5228..5863 | + | 636 | Protein_9 | helix-turn-helix domain-containing protein | - |
| P1J23_RS28055 (P1J23_28055) | 6052..7239 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| P1J23_RS28060 (P1J23_28060) | 7239..7604 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| P1J23_RS28065 (P1J23_28065) | 7693..8307 | + | 615 | Protein_12 | IS3 family transposase ISNoc1 | Transposase |
| P1J23_RS28070 (P1J23_28070) | 8372..9076 | + | 705 | WP_001067834.1 | IS6 family transposase IS26 | Transposase |
| P1J23_RS28075 (P1J23_28075) | 9399..10391 | - | 993 | WP_276171336.1 | IS91 family transposase ISVsa3 | Transposase |
| P1J23_RS28080 (P1J23_28080) | 10619..11806 | - | 1188 | WP_276171320.1 | IS91 family transposase IS91 | Transposase |
| P1J23_RS28085 (P1J23_28085) | 11806..12171 | - | 366 | WP_000124096.1 | hypothetical protein | - |
| P1J23_RS28090 (P1J23_28090) | 12275..12712 | - | 438 | Protein_17 | IS91 family transposase ISPps1 | Transposase |
| P1J23_RS28095 (P1J23_28095) | 12987..13328 | - | 342 | WP_023909256.1 | 60 kDa chaperonin | VF |
| P1J23_RS28100 (P1J23_28100) | 13289..13738 | - | 450 | WP_013362817.1 | hypothetical protein | - |
| P1J23_RS28105 (P1J23_28105) | 14368..15105 | - | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| P1J23_RS28110 (P1J23_28110) | 15231..15326 | - | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| P1J23_RS28115 (P1J23_28115) | 15461..16165 | + | 705 | WP_001067834.1 | IS6 family transposase IS26 | Transposase |
| P1J23_RS28120 (P1J23_28120) | 16287..17192 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| P1J23_RS28125 (P1J23_28125) | 17189..18427 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| P1J23_RS28130 (P1J23_28130) | 18427..18639 | + | 213 | Protein_25 | macrolide-binding transcriptional repressor MphR(A) | - |
| P1J23_RS28135 (P1J23_28135) | 18693..19397 | - | 705 | WP_001067845.1 | IS6 family transposase IS26 | Transposase |
| P1J23_RS28140 (P1J23_28140) | 19422..19946 | + | 525 | WP_050195267.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| P1J23_RS28145 (P1J23_28145) | 20023..21414 | + | 1392 | WP_000085084.1 | SIR2 family protein | - |
| P1J23_RS28150 (P1J23_28150) | 21411..23483 | + | 2073 | WP_001084041.1 | DUF87 domain-containing protein | - |
| P1J23_RS28155 (P1J23_28155) | 23673..23912 | - | 240 | WP_000371884.1 | hypothetical protein | - |
| P1J23_RS28160 (P1J23_28160) | 24080..24757 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| P1J23_RS28165 (P1J23_28165) | 24757..25104 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| P1J23_RS28170 (P1J23_28170) | 25124..26695 | + | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| P1J23_RS28175 (P1J23_28175) | 26894..27385 | + | 492 | WP_000528930.1 | HEPN family nuclease | - |
| P1J23_RS28180 (P1J23_28180) | 27397..28155 | + | 759 | WP_000494510.1 | hypothetical protein | - |
| P1J23_RS28185 (P1J23_28185) | 28446..29969 | + | 1524 | WP_000921251.1 | hypothetical protein | - |
| P1J23_RS28190 (P1J23_28190) | 30004..31128 | + | 1125 | WP_000386705.1 | DUF4238 domain-containing protein | - |
| P1J23_RS28195 (P1J23_28195) | 31128..31418 | + | 291 | WP_000648897.1 | hypothetical protein | - |
| P1J23_RS28200 (P1J23_28200) | 31800..32723 | - | 924 | WP_001118645.1 | IS5 family transposase IS903B | Transposase |
| P1J23_RS28205 (P1J23_28205) | 33056..34057 | + | 1002 | WP_000785695.1 | DUF4238 domain-containing protein | - |
| P1J23_RS28210 (P1J23_28210) | 34231..34575 | - | 345 | WP_000792769.1 | hypothetical protein | - |
| P1J23_RS28215 (P1J23_28215) | 35073..35327 | - | 255 | WP_000678528.1 | hypothetical protein | - |
| P1J23_RS28220 (P1J23_28220) | 35377..36303 | - | 927 | WP_001290414.1 | hypothetical protein | - |
| P1J23_RS28225 (P1J23_28225) | 36862..37080 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| P1J23_RS28230 (P1J23_28230) | 37082..37387 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| P1J23_RS28235 (P1J23_28235) | 37388..38197 | + | 810 | WP_000016963.1 | site-specific integrase | - |
| P1J23_RS28240 (P1J23_28240) | 38369..38563 | + | 195 | Protein_47 | colicin M immunity protein | - |
| P1J23_RS28245 (P1J23_28245) | 38619..39316 | + | 698 | WP_223200906.1 | IS1 family transposase IS1R | Transposase |
| P1J23_RS28250 (P1J23_28250) | 39332..39922 | - | 591 | Protein_49 | colicin-like bacteriocin tRNase domain-containing protein | - |
| P1J23_RS28255 (P1J23_28255) | 40102..40528 | + | 427 | Protein_50 | tyrosine-type recombinase/integrase | - |
| P1J23_RS28260 (P1J23_28260) | 40720..40995 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| P1J23_RS28265 (P1J23_28265) | 40989..41633 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| P1J23_RS28270 (P1J23_28270) | 41862..42833 | + | 972 | WP_001103697.1 | plasmid segregation protein ParM | - |
| P1J23_RS28275 (P1J23_28275) | 42838..43230 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| P1J23_RS28280 (P1J23_28280) | 43235..44506 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| P1J23_RS28285 (P1J23_28285) | 44506..44943 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| P1J23_RS28290 (P1J23_28290) | 44940..45188 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| P1J23_RS28295 (P1J23_28295) | 45606..46508 | + | 903 | WP_001302618.1 | DUF1281 domain-containing protein | - |
| P1J23_RS28300 (P1J23_28300) | 46512..46817 | + | 306 | WP_032155763.1 | hypothetical protein | - |
| P1J23_RS28305 (P1J23_28305) | 46893..47576 | + | 684 | WP_000086160.1 | DNA methylase | - |
| P1J23_RS28310 (P1J23_28310) | 47577..47798 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| P1J23_RS28315 (P1J23_28315) | 47758..48244 | + | 487 | Protein_62 | DUF1380 family protein | - |
| P1J23_RS28320 (P1J23_28320) | 48289..49059 | + | 771 | WP_001006225.1 | hypothetical protein | - |
| P1J23_RS28325 (P1J23_28325) | 49473..49898 | + | 426 | WP_089079046.1 | antirestriction protein | - |
| P1J23_RS28330 (P1J23_28330) | 49945..50367 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| P1J23_RS28335 (P1J23_28335) | 50364..50555 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| P1J23_RS28340 (P1J23_28340) | 50869..52536 | - | 1668 | WP_052991863.1 | group II intron reverse transcriptase/maturase | - |
| P1J23_RS28345 (P1J23_28345) | 53265..53419 | - | 155 | Protein_68 | hypothetical protein | - |
| P1J23_RS28350 (P1J23_28350) | 53936..54166 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| P1J23_RS28355 (P1J23_28355) | 54218..55579 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| P1J23_RS28360 (P1J23_28360) | 55626..56189 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| P1J23_RS28365 (P1J23_28365) | 56275..56724 | - | 450 | Protein_72 | hypothetical protein | - |
| P1J23_RS28370 (P1J23_28370) | 57024..57320 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| P1J23_RS28375 (P1J23_28375) | 57431..58252 | + | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| P1J23_RS28380 (P1J23_28380) | 58549..59139 | - | 591 | WP_000252683.1 | hypothetical protein | VF |
| P1J23_RS28385 (P1J23_28385) | 59474..59857 | + | 384 | WP_001354030.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| P1J23_RS28390 (P1J23_28390) | 60051..60722 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| P1J23_RS28395 (P1J23_28395) | 60859..61086 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| P1J23_RS28400 (P1J23_28400) | 61119..61478 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| P1J23_RS28405 (P1J23_28405) | 61493..61804 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| P1J23_RS28410 (P1J23_28410) | 61826..62392 | + | 567 | WP_000399793.1 | type IV conjugative transfer system protein TraE | - |
| P1J23_RS28415 (P1J23_28415) | 62379..63107 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| P1J23_RS28420 (P1J23_28420) | 63107..64558 | + | 1452 | WP_000146675.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| P1J23_RS28425 (P1J23_28425) | 64548..65114 | + | 567 | WP_000896599.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| P1J23_RS28430 (P1J23_28430) | 65101..65421 | + | 321 | WP_001057307.1 | conjugal transfer protein TrbD | - |
| P1J23_RS28435 (P1J23_28435) | 65418..65933 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| P1J23_RS28440 (P1J23_28440) | 66068..66289 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| P1J23_RS28445 (P1J23_28445) | 66325..67293 | + | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| P1J23_RS28450 (P1J23_28450) | 67333..67761 | + | 429 | WP_089438737.1 | hypothetical protein | - |
| P1J23_RS28455 (P1J23_28455) | 67754..68227 | + | 474 | WP_000549568.1 | hypothetical protein | - |
| P1J23_RS28460 (P1J23_28460) | 68307..68525 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| P1J23_RS28465 (P1J23_28465) | 68553..68900 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| P1J23_RS28470 (P1J23_28470) | 69026..71656 | + | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| P1J23_RS28475 (P1J23_28475) | 71653..72039 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| P1J23_RS28480 (P1J23_28480) | 72036..72668 | + | 633 | WP_094885485.1 | type-F conjugative transfer system protein TraW | - |
| P1J23_RS28485 (P1J23_28485) | 72665..73657 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| P1J23_RS28490 (P1J23_28490) | 73687..73992 | + | 306 | WP_000224416.1 | hypothetical protein | - |
| P1J23_RS28495 (P1J23_28495) | 74001..74639 | + | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| P1J23_RS28500 (P1J23_28500) | 74636..76486 | + | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| P1J23_RS28505 (P1J23_28505) | 76513..76770 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| P1J23_RS28510 (P1J23_28510) | 76763..77506 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| P1J23_RS28515 (P1J23_28515) | 77520..77864 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| P1J23_RS28520 (P1J23_28520) | 77983..78267 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| P1J23_RS28525 (P1J23_28525) | 78254..78799 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| P1J23_RS28530 (P1J23_28530) | 78729..79076 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| P1J23_RS28535 (P1J23_28535) | 79057..79449 | + | 393 | WP_000660699.1 | F-type conjugal transfer protein TrbF | - |
| P1J23_RS28540 (P1J23_28540) | 79436..80809 | + | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| P1J23_RS28545 (P1J23_28545) | 80806..83628 | + | 2823 | WP_001007039.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| P1J23_RS28550 (P1J23_28550) | 83644..84129 | + | 486 | WP_000605870.1 | hypothetical protein | - |
| P1J23_RS28555 (P1J23_28555) | 84178..84909 | + | 732 | WP_000782451.1 | conjugal transfer complement resistance protein TraT | - |
| P1J23_RS28560 (P1J23_28560) | 85112..85849 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| P1J23_RS28565 (P1J23_28565) | 85900..88206 | + | 2307 | WP_099004446.1 | Coupling protein TraD | VF |
| P1J23_RS28570 (P1J23_28570) | 88206..93476 | + | 5271 | WP_000948354.1 | Multifunctional conjugation protein TraI | Relaxase |
| P1J23_RS28575 (P1J23_28575) | 93496..94242 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| P1J23_RS28580 (P1J23_28580) | 94301..95161 | + | 861 | WP_000704523.1 | Quorum-quenching protein AidA | VF |
| P1J23_RS28585 (P1J23_28585) | 95264..95824 | + | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| P1J23_RS28590 (P1J23_28590) | 95953..96165 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| P1J23_RS28595 (P1J23_28595) | 96410..96871 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| P1J23_RS28600 (P1J23_28600) | 96917..97126 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| P1J23_RS28605 (P1J23_28605) | 97164..97754 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| P1J23_RS28610 (P1J23_28610) | 97994..98247 | + | 254 | Protein_121 | replication regulatory protein RepA | - |
| P1J23_RS28615 (P1J23_28615) | 98485..98559 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| P1J23_RS28620 (P1J23_28620) | 98552..99409 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|