MGE detailed information
MGE type: Genomic_island MGE length: 99845 bp
Accession: NZ_CP119740 Location: 4529209..4629053 Organism: Escherichia coli strain E94 Replicon: chromosome
Accession: NZ_CP119740 Location: 4529209..4629053 Organism: Escherichia coli strain E94 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1J23_RS22660 (4525169) | 4525169..4527079 | + | 1911 | WP_023148066.1 | site-specific integrase | - |
| P1J23_RS22665 (4527212) | 4527212..4527544 | - | 333 | WP_001261095.1 | NIPSNAP family protein | - |
| P1J23_RS22670 (4528550) | 4528550..4529016 | - | 467 | Protein_4440 | DUF1643 domain-containing protein | - |
| P1J23_RS22675 (4529209) | 4529209..4529769 | + | 561 | WP_000190110.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| P1J23_RS22680 (4529783) | 4529783..4530628 | + | 846 | WP_000331917.1 | hypothetical protein | - |
| P1J23_RS22685 (4530689) | 4530689..4531183 | - | 495 | WP_000145203.1 | membrane protein | - |
| P1J23_RS22690 (4531424) | 4531424..4531888 | + | 465 | WP_000749342.1 | helix-turn-helix transcriptional regulator | - |
| P1J23_RS22695 (4532926) | 4532926..4533750 | + | 825 | WP_000594911.1 | hypothetical protein | - |
| P1J23_RS22700 (4533799) | 4533799..4534371 | - | 573 | WP_000227281.1 | hypothetical protein | - |
| P1J23_RS22705 (4534472) | 4534472..4534729 | + | 258 | Protein_4447 | IS3 family transposase IS911 | Transposase |
| P1J23_RS22710 (4534742) | 4534742..4535893 | - | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| P1J23_RS22715 (4535890) | 4535890..4535970 | - | 81 | Protein_4449 | hypothetical protein | - |
| P1J23_RS22720 (4535958) | 4535958..4536862 | + | 905 | Protein_4450 | IS3 family transposase | - |
| P1J23_RS22725 (4536945) | 4536945..4537202 | + | 258 | WP_000177060.1 | hypothetical protein | - |
| P1J23_RS22730 (4537760) | 4537760..4538527 | - | 768 | WP_000175457.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| P1J23_RS22735 (4538528) | 4538528..4539484 | - | 957 | WP_000684856.1 | Fe(3+) dicitrate transport system permease protein FecD | VF |
| P1J23_RS22740 (4539481) | 4539481..4540479 | - | 999 | WP_000125187.1 | Fe(3+) dicitrate transport system permease protein FecC | VF |
| P1J23_RS22745 (4540476) | 4540476..4541378 | - | 903 | WP_000879164.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| P1J23_RS22750 (4541423) | 4541423..4543747 | - | 2325 | WP_000188267.1 | TonB-dependent Fe(3+) dicitrate receptor FecA | - |
| P1J23_RS22755 (4543834) | 4543834..4544787 | - | 954 | WP_001068910.1 | ferric citrate uptake sigma factor regulator FecR | - |
| P1J23_RS22760 (4544784) | 4544784..4545305 | - | 522 | WP_001283626.1 | putative RNA polymerase sigma factor FecI | VF |
| P1J23_RS22765 (4545442) | 4545442..4545510 | + | 69 | WP_211180522.1 | protein YkiE | - |
| P1J23_RS22770 (4545597) | 4545597..4546294 | + | 698 | Protein_4460 | IS1-like element IS1F family transposase | - |
| P1J23_RS22775 (4546439) | 4546439..4546585 | + | 147 | Protein_4461 | IS3 family transposase | - |
| P1J23_RS22780 (4546612) | 4546612..4546716 | + | 105 | Protein_4462 | IS3 family transposase | - |
| P1J23_RS22785 (4547020) | 4547020..4547313 | + | 294 | WP_000239862.1 | biofilm development regulator YmgB/AriR family protein | - |
| P1J23_RS22790 (4547476) | 4547476..4547667 | - | 192 | WP_000937735.1 | hypothetical protein | - |
| P1J23_RS22795 (4547633) | 4547633..4547764 | - | 132 | Protein_4465 | IS3 family transposase | - |
| P1J23_RS22800 (4548046) | 4548046..4549404 | + | 1359 | WP_000823243.1 | esterase-like activity of phytase family protein | - |
| P1J23_RS22805 (4549643) | 4549643..4551028 | - | 1386 | WP_000998019.1 | IS66 family transposase ISEc8 | Transposase |
| P1J23_RS22810 (4551078) | 4551078..4551425 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| P1J23_RS22815 (4551422) | 4551422..4551802 | - | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| P1J23_RS22820 (4552157) | 4552157..4552591 | - | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| P1J23_RS22825 (4552579) | 4552579..4552980 | - | 402 | WP_000271003.1 | putative zinc ribbon protein | - |
| P1J23_RS22830 (4553146) | 4553146..4553715 | - | 570 | WP_000221529.1 | inovirus Gp2 family protein | - |
| P1J23_RS22835 (4553890) | 4553890..4554086 | + | 197 | Protein_4473 | hypothetical protein | - |
| P1J23_RS22840 (4554430) | 4554430..4554555 | - | 126 | Protein_4474 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| P1J23_RS22845 (4555318) | 4555318..4555500 | + | 183 | Protein_4475 | hypothetical protein | - |
| P1J23_RS22850 (4555538) | 4555538..4556751 | + | 1214 | WP_096964937.1 | IS3 family transposase ISEc31 | Transposase |
| P1J23_RS22855 (4556877) | 4556877..4557332 | + | 456 | WP_000581504.1 | IrmA family protein | - |
| P1J23_RS22860 (4557411) | 4557411..4557644 | + | 234 | WP_001119729.1 | DUF905 family protein | - |
| P1J23_RS22865 (4557744) | 4557744..4558078 | + | 335 | Protein_4479 | DUF932 domain-containing protein | - |
| P1J23_RS22870 (4558745) | 4558745..4558888 | - | 144 | Protein_4480 | HNH endonuclease | - |
| P1J23_RS22875 (4559025) | 4559025..4559675 | + | 651 | WP_001037966.1 | HNH endonuclease | - |
| P1J23_RS22880 (4559683) | 4559683..4560663 | - | 981 | WP_000991415.1 | sialate O-acetylesterase | - |
| P1J23_RS22885 (4560728) | 4560728..4561834 | - | 1107 | WP_001341302.1 | N-acetylneuraminate epimerase | - |
| P1J23_RS22890 (4561854) | 4561854..4562570 | - | 717 | Protein_4484 | N-acetylneuraminic acid outer membrane channel NanC | - |
| P1J23_RS22895 (4563840) | 4563840..4565048 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| P1J23_RS22900 (4565364) | 4565364..4565966 | + | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| P1J23_RS22905 (4566444) | 4566444..4567040 | + | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| P1J23_RS22910 (4567521) | 4567521..4568069 | + | 549 | WP_000695546.1 | Type-1 fimbrial protein, A chain | VF |
| P1J23_RS22915 (4568134) | 4568134..4568673 | + | 540 | WP_000824105.1 | putative major fimbrial subunit LpfA | VF |
| P1J23_RS22920 (4568710) | 4568710..4569435 | + | 726 | WP_000066560.1 | Chaperone protein FimC | VF |
| P1J23_RS22925 (4569502) | 4569502..4572138 | + | 2637 | WP_000120930.1 | Outer membrane usher protein FimD | VF |
| P1J23_RS22930 (4572148) | 4572148..4572678 | + | 531 | WP_001244826.1 | Protein FimF | VF |
| P1J23_RS22935 (4572691) | 4572691..4573194 | + | 504 | WP_000872005.1 | Protein FimG | VF |
| P1J23_RS22940 (4573214) | 4573214..4574116 | + | 903 | WP_000832240.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| P1J23_RS22945 (4574359) | 4574359..4574451 | - | 93 | Protein_4495 | hypothetical protein | - |
| P1J23_RS22950 (4574903) | 4574903..4576087 | + | 1185 | WP_000438591.1 | mannonate dehydratase | - |
| P1J23_RS22955 (4576168) | 4576168..4577628 | + | 1461 | WP_000208220.1 | fructuronate reductase | - |
| P1J23_RS22960 (4577843) | 4577843..4578616 | + | 774 | WP_000833677.1 | Uxu operon transcriptional regulator | - |
| P1J23_RS22965 (4578757) | 4578757..4579587 | - | 831 | WP_001680156.1 | YjfZ/YjiC family protein | - |
| P1J23_RS22970 (4579921) | 4579921..4580064 | + | 144 | WP_001301448.1 | protein YtiD | - |
| P1J23_RS22975 (4580180) | 4580180..4580263 | + | 84 | WP_120795393.1 | iraD leader peptide IdlP | - |
| P1J23_RS22980 (4580260) | 4580260..4580652 | + | 393 | WP_000986224.1 | anti-adapter protein IraD | - |
| P1J23_RS22985 (4580645) | 4580645..4581556 | - | 912 | WP_000340740.1 | hypochlorite stress DNA-binding transcriptional regulator HypT | - |
| P1J23_RS22990 (4581621) | 4581621..4582793 | - | 1173 | WP_000568432.1 | beta-aspartyl-peptidase | - |
| P1J23_RS22995 (4582806) | 4582806..4583267 | - | 462 | WP_000211971.1 | YjiG family protein | - |
| P1J23_RS23000 (4583264) | 4583264..4583947 | - | 684 | WP_001295597.1 | nucleoside recognition domain-containing protein | - |
| P1J23_RS23005 (4584197) | 4584197..4584751 | + | 555 | WP_001151859.1 | RNA 2'-phosphotransferase | - |
| P1J23_RS23010 (4584764) | 4584764..4585942 | - | 1179 | WP_001141202.1 | MFS transporter | - |
| P1J23_RS23015 (4586010) | 4586010..4586321 | - | 312 | Protein_4509 | SdiA-regulated domain-containing protein | - |
| P1J23_RS23020 (4586337) | 4586337..4587545 | - | 1209 | WP_001339175.1 | IS4 family transposase IS10R | Transposase |
| P1J23_RS23030 (4588775) | 4588775..4589398 | - | 624 | WP_000904897.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| P1J23_RS23035 (4589524) | 4589524..4592409 | + | 2886 | WP_001138082.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| P1J23_RS23040 (4592567) | 4592567..4593382 | - | 816 | WP_000018322.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| P1J23_RS23045 (4593600) | 4593600..4594436 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| P1J23_RS23050 (4594436) | 4594436..4595239 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| P1J23_RS23055 (4595300) | 4595300..4596115 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| P1J23_RS23060 (4596356) | 4596356..4596922 | - | 567 | WP_000919994.1 | hypothetical protein | - |
| P1J23_RS23065 (4597758) | 4597758..4597933 | - | 176 | Protein_4519 | transposase | - |
| P1J23_RS23070 (4598122) | 4598122..4598298 | - | 177 | Protein_4520 | transketolase family protein | - |
| P1J23_RS23075 (4598358) | 4598358..4599049 | + | 692 | Protein_4521 | IS1 family transposase | - |
| P1J23_RS23080 (4599452) | 4599452..4599643 | + | 192 | WP_001323513.1 | hypothetical protein | - |
| P1J23_RS23085 (4599712) | 4599712..4599960 | + | 249 | WP_001349534.1 | ProQ/FINO family protein | - |
| P1J23_RS23090 (4599979) | 4599979..4600527 | - | 549 | WP_032153702.1 | hypothetical protein | - |
| P1J23_RS23095 (4600615) | 4600615..4600767 | - | 153 | WP_001439809.1 | hypothetical protein | - |
| P1J23_RS23100 (4600796) | 4600796..4601032 | - | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| P1J23_RS23105 (4601101) | 4601101..4601673 | - | 573 | WP_032153703.1 | hypothetical protein | - |
| P1J23_RS23110 (4601688) | 4601688..4601837 | + | 150 | WP_001421645.1 | hypothetical protein | - |
| P1J23_RS23115 (4601957) | 4601957..4602523 | - | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| P1J23_RS23120 (4604120) | 4604120..4605724 | - | 1605 | WP_001067608.1 | YfjI family protein | - |
| P1J23_RS23125 (4606158) | 4606158..4606364 | + | 207 | WP_025492114.1 | hypothetical protein | - |
| P1J23_RS23130 (4606376) | 4606376..4606636 | - | 261 | WP_223362175.1 | hypothetical protein | - |
| P1J23_RS23135 (4606660) | 4606660..4606815 | + | 156 | WP_020923993.1 | hypothetical protein | - |
| P1J23_RS23140 (4606909) | 4606909..4607640 | - | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| P1J23_RS23145 (4608818) | 4608818..4608952 | - | 135 | WP_000268384.1 | hypothetical protein | - |
| P1J23_RS23150 (4609391) | 4609391..4610200 | + | 810 | WP_032153709.1 | hypothetical protein | - |
| P1J23_RS23155 (4610197) | 4610197..4611129 | - | 933 | WP_023155730.1 | hypothetical protein | - |
| P1J23_RS23160 (4611236) | 4611236..4612120 | + | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| P1J23_RS23165 (4612239) | 4612239..4612916 | + | 678 | WP_023155728.1 | hypothetical protein | - |
| P1J23_RS23170 (4612946) | 4612946..4613155 | + | 210 | WP_023155727.1 | DUF905 family protein | - |
| P1J23_RS23175 (4613246) | 4613246..4614064 | + | 819 | WP_001234693.1 | DUF932 domain-containing protein | - |
| P1J23_RS23180 (4614156) | 4614156..4614641 | + | 486 | WP_032153711.1 | antirestriction protein | - |
| P1J23_RS23185 (4614657) | 4614657..4615133 | + | 477 | WP_001186715.1 | RadC family protein | - |
| P1J23_RS23190 (4615202) | 4615202..4615423 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| P1J23_RS23195 (4615503) | 4615503..4615877 | + | 375 | WP_032153712.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| P1J23_RS23200 (4615924) | 4615924..4616301 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| P1J23_RS23205 (4616298) | 4616298..4616789 | + | 492 | WP_023155722.1 | DUF5983 family protein | - |
| P1J23_RS23210 (4616801) | 4616801..4616998 | + | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| P1J23_RS23215 (4617083) | 4617083..4617949 | + | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| P1J23_RS23220 (4618021) | 4618021..4618284 | + | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| P1J23_RS23225 (4618281) | 4618281..4618607 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| P1J23_RS23230 (4619071) | 4619071..4620333 | + | 1263 | WP_001218820.1 | Prophage integrase IntS ; Integrase | Integrase |
| P1J23_RS23235 (4620785) | 4620785..4624300 | + | 3516 | WP_000344091.1 | AAA domain-containing protein | - |
| P1J23_RS23240 (4624409) | 4624409..4625908 | - | 1500 | WP_001026222.1 | phosphoethanolamine transferase | - |
| P1J23_RS23245 (4626083) | 4626083..4626829 | - | 747 | WP_001350744.1 | invasion outer membrane protein Tia | - |
| P1J23_RS23250 (4627189) | 4627189..4628052 | - | 864 | Protein_4556 | Fimbrial adhesin PapG | VF |
| P1J23_RS23255 (4628130) | 4628130..4629053 | + | 924 | WP_001118645.1 | IS5 family transposase IS903B | Transposase |
| P1J23_RS23260 (4629109) | 4629109..4629930 | + | 822 | Protein_4558 | YfjP family GTPase | - |
| P1J23_RS23265 (4630133) | 4630133..4630813 | + | 681 | WP_032082725.1 | WYL domain-containing protein | - |
| P1J23_RS23270 (4630961) | 4630961..4631638 | + | 678 | WP_001097312.1 | hypothetical protein | - |
| P1J23_RS23275 (4631644) | 4631644..4631877 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| P1J23_RS23280 (4631967) | 4631967..4632785 | + | 819 | WP_001175142.1 | DUF932 domain-containing protein | - |
| P1J23_RS23285 (4632876) | 4632876..4633361 | + | 486 | WP_000860054.1 | antirestriction protein | - |
| P1J23_RS23290 (4633376) | 4633376..4633851 | + | 476 | Protein_4564 | RadC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|