MGE detailed information
MGE type: Genomic_island MGE length: 99845 bp
Accession: NZ_CP119734 Location: 4529226..4629070 Organism: Escherichia coli strain E92 Replicon: chromosome
Accession: NZ_CP119734 Location: 4529226..4629070 Organism: Escherichia coli strain E92 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1J22_RS22670 (4525186) | 4525186..4527096 | + | 1911 | WP_023148066.1 | site-specific integrase | - |
| P1J22_RS22675 (4527229) | 4527229..4527561 | - | 333 | WP_001261095.1 | NIPSNAP family protein | - |
| P1J22_RS22680 (4528567) | 4528567..4529033 | - | 467 | Protein_4442 | DUF1643 domain-containing protein | - |
| P1J22_RS22685 (4529226) | 4529226..4529786 | + | 561 | WP_000190110.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| P1J22_RS22690 (4529800) | 4529800..4530645 | + | 846 | WP_000331917.1 | hypothetical protein | - |
| P1J22_RS22695 (4530706) | 4530706..4531200 | - | 495 | WP_000145203.1 | membrane protein | - |
| P1J22_RS22700 (4531441) | 4531441..4531905 | + | 465 | WP_000749342.1 | helix-turn-helix transcriptional regulator | - |
| P1J22_RS22705 (4532943) | 4532943..4533767 | + | 825 | WP_000594911.1 | hypothetical protein | - |
| P1J22_RS22710 (4533816) | 4533816..4534442 | - | 627 | WP_001372849.1 | hypothetical protein | - |
| P1J22_RS22715 (4534489) | 4534489..4534746 | + | 258 | Protein_4449 | IS3 family transposase IS911 | Transposase |
| P1J22_RS22720 (4534759) | 4534759..4535910 | - | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| P1J22_RS22725 (4535907) | 4535907..4535987 | - | 81 | Protein_4451 | hypothetical protein | - |
| P1J22_RS22730 (4535975) | 4535975..4536879 | + | 905 | Protein_4452 | IS3 family transposase | - |
| P1J22_RS22735 (4536962) | 4536962..4537219 | + | 258 | WP_000177060.1 | hypothetical protein | - |
| P1J22_RS22740 (4537777) | 4537777..4538544 | - | 768 | WP_000175457.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| P1J22_RS22745 (4538545) | 4538545..4539501 | - | 957 | WP_000684856.1 | Fe(3+) dicitrate transport system permease protein FecD | VF |
| P1J22_RS22750 (4539498) | 4539498..4540496 | - | 999 | WP_000125187.1 | Fe(3+) dicitrate transport system permease protein FecC | VF |
| P1J22_RS22755 (4540493) | 4540493..4541395 | - | 903 | WP_000879164.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| P1J22_RS22760 (4541440) | 4541440..4543764 | - | 2325 | WP_000188267.1 | TonB-dependent Fe(3+) dicitrate receptor FecA | - |
| P1J22_RS22765 (4543851) | 4543851..4544804 | - | 954 | WP_001068910.1 | ferric citrate uptake sigma factor regulator FecR | - |
| P1J22_RS22770 (4544801) | 4544801..4545322 | - | 522 | WP_001283626.1 | putative RNA polymerase sigma factor FecI | VF |
| P1J22_RS22775 (4545459) | 4545459..4545527 | + | 69 | WP_211180522.1 | protein YkiE | - |
| P1J22_RS22780 (4545614) | 4545614..4546311 | + | 698 | Protein_4462 | IS1-like element IS1F family transposase | - |
| P1J22_RS22785 (4546456) | 4546456..4546602 | + | 147 | Protein_4463 | IS3 family transposase | - |
| P1J22_RS22790 (4546629) | 4546629..4546733 | + | 105 | Protein_4464 | IS3 family transposase | - |
| P1J22_RS22795 (4547037) | 4547037..4547330 | + | 294 | WP_000239862.1 | biofilm development regulator YmgB/AriR family protein | - |
| P1J22_RS22800 (4547650) | 4547650..4547781 | - | 132 | Protein_4466 | IS3 family transposase | - |
| P1J22_RS22805 (4548063) | 4548063..4549421 | + | 1359 | WP_000823243.1 | esterase-like activity of phytase family protein | - |
| P1J22_RS22810 (4549660) | 4549660..4551045 | - | 1386 | WP_000998019.1 | IS66 family transposase ISEc8 | Transposase |
| P1J22_RS22815 (4551095) | 4551095..4551442 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| P1J22_RS22820 (4551439) | 4551439..4551819 | - | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| P1J22_RS22825 (4552174) | 4552174..4552608 | - | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| P1J22_RS22830 (4552596) | 4552596..4552997 | - | 402 | WP_000271003.1 | putative zinc ribbon protein | - |
| P1J22_RS22835 (4553163) | 4553163..4553732 | - | 570 | WP_000221529.1 | inovirus Gp2 family protein | - |
| P1J22_RS22840 (4553907) | 4553907..4554103 | + | 197 | Protein_4474 | hypothetical protein | - |
| P1J22_RS22845 (4554447) | 4554447..4554572 | - | 126 | Protein_4475 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| P1J22_RS22850 (4555329) | 4555329..4555523 | + | 195 | WP_276171073.1 | hypothetical protein | - |
| P1J22_RS22855 (4555555) | 4555555..4556768 | + | 1214 | WP_096964937.1 | IS3 family transposase ISEc31 | Transposase |
| P1J22_RS22860 (4556894) | 4556894..4557349 | + | 456 | WP_000581504.1 | IrmA family protein | - |
| P1J22_RS22865 (4557428) | 4557428..4557661 | + | 234 | WP_001119729.1 | DUF905 family protein | - |
| P1J22_RS22870 (4557761) | 4557761..4558095 | + | 335 | Protein_4480 | DUF932 domain-containing protein | - |
| P1J22_RS22875 (4558762) | 4558762..4558905 | - | 144 | Protein_4481 | HNH endonuclease | - |
| P1J22_RS22880 (4559042) | 4559042..4559692 | + | 651 | WP_001037966.1 | HNH endonuclease | - |
| P1J22_RS22885 (4559700) | 4559700..4560680 | - | 981 | WP_000991415.1 | sialate O-acetylesterase | - |
| P1J22_RS22890 (4560745) | 4560745..4561851 | - | 1107 | WP_001341302.1 | N-acetylneuraminate epimerase | - |
| P1J22_RS22895 (4561871) | 4561871..4562587 | - | 717 | Protein_4485 | N-acetylneuraminic acid outer membrane channel NanC | - |
| P1J22_RS22900 (4563857) | 4563857..4565065 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| P1J22_RS22905 (4565381) | 4565381..4565983 | + | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| P1J22_RS22910 (4566461) | 4566461..4567057 | + | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| P1J22_RS22915 (4567538) | 4567538..4568086 | + | 549 | WP_000695546.1 | Type-1 fimbrial protein, A chain | VF |
| P1J22_RS22920 (4568151) | 4568151..4568690 | + | 540 | WP_000824105.1 | putative major fimbrial subunit LpfA | VF |
| P1J22_RS22925 (4568727) | 4568727..4569452 | + | 726 | WP_000066560.1 | Chaperone protein FimC | VF |
| P1J22_RS22930 (4569519) | 4569519..4572155 | + | 2637 | WP_000120930.1 | Outer membrane usher protein FimD | VF |
| P1J22_RS22935 (4572165) | 4572165..4572695 | + | 531 | WP_001244826.1 | Protein FimF | VF |
| P1J22_RS22940 (4572708) | 4572708..4573211 | + | 504 | WP_000872005.1 | Protein FimG | VF |
| P1J22_RS22945 (4573231) | 4573231..4574133 | + | 903 | WP_000832240.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| P1J22_RS22950 (4574376) | 4574376..4574468 | - | 93 | Protein_4496 | hypothetical protein | - |
| P1J22_RS22955 (4574920) | 4574920..4576104 | + | 1185 | WP_000438591.1 | mannonate dehydratase | - |
| P1J22_RS22960 (4576185) | 4576185..4577645 | + | 1461 | WP_000208220.1 | fructuronate reductase | - |
| P1J22_RS22965 (4577860) | 4577860..4578633 | + | 774 | WP_000833677.1 | Uxu operon transcriptional regulator | - |
| P1J22_RS22970 (4578774) | 4578774..4579604 | - | 831 | WP_001680156.1 | YjfZ/YjiC family protein | - |
| P1J22_RS22975 (4579938) | 4579938..4580081 | + | 144 | WP_001301448.1 | protein YtiD | - |
| P1J22_RS22980 (4580197) | 4580197..4580280 | + | 84 | WP_120795393.1 | iraD leader peptide IdlP | - |
| P1J22_RS22985 (4580277) | 4580277..4580669 | + | 393 | WP_000986224.1 | anti-adapter protein IraD | - |
| P1J22_RS22990 (4580662) | 4580662..4581573 | - | 912 | WP_000340740.1 | hypochlorite stress DNA-binding transcriptional regulator HypT | - |
| P1J22_RS22995 (4581638) | 4581638..4582810 | - | 1173 | WP_000568432.1 | beta-aspartyl-peptidase | - |
| P1J22_RS23000 (4582823) | 4582823..4583284 | - | 462 | WP_000211971.1 | YjiG family protein | - |
| P1J22_RS23005 (4583281) | 4583281..4583964 | - | 684 | WP_001295597.1 | nucleoside recognition domain-containing protein | - |
| P1J22_RS23010 (4584214) | 4584214..4584768 | + | 555 | WP_001151859.1 | RNA 2'-phosphotransferase | - |
| P1J22_RS23015 (4584781) | 4584781..4585959 | - | 1179 | WP_001141202.1 | MFS transporter | - |
| P1J22_RS23020 (4586027) | 4586027..4586338 | - | 312 | Protein_4510 | SdiA-regulated domain-containing protein | - |
| P1J22_RS23025 (4586354) | 4586354..4587562 | - | 1209 | WP_001339175.1 | IS4 family transposase IS10R | Transposase |
| P1J22_RS23035 (4588792) | 4588792..4589415 | - | 624 | WP_000904897.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| P1J22_RS23040 (4589541) | 4589541..4592426 | + | 2886 | WP_001138082.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| P1J22_RS23045 (4592584) | 4592584..4593399 | - | 816 | WP_000018322.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| P1J22_RS23050 (4593617) | 4593617..4594453 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| P1J22_RS23055 (4594453) | 4594453..4595256 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| P1J22_RS23060 (4595317) | 4595317..4596132 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| P1J22_RS23065 (4596373) | 4596373..4596939 | - | 567 | WP_000919994.1 | hypothetical protein | - |
| P1J22_RS23070 (4597775) | 4597775..4597950 | - | 176 | Protein_4520 | transposase | - |
| P1J22_RS23075 (4598139) | 4598139..4598315 | - | 177 | Protein_4521 | transketolase family protein | - |
| P1J22_RS23080 (4598375) | 4598375..4599066 | + | 692 | Protein_4522 | IS1 family transposase | - |
| P1J22_RS23085 (4599469) | 4599469..4599660 | + | 192 | WP_001323513.1 | hypothetical protein | - |
| P1J22_RS23090 (4599729) | 4599729..4599977 | + | 249 | WP_001349534.1 | ProQ/FINO family protein | - |
| P1J22_RS23095 (4599996) | 4599996..4600544 | - | 549 | WP_032153702.1 | hypothetical protein | - |
| P1J22_RS23100 (4600632) | 4600632..4600784 | - | 153 | WP_001439809.1 | hypothetical protein | - |
| P1J22_RS23105 (4600813) | 4600813..4601049 | - | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| P1J22_RS23110 (4601118) | 4601118..4601690 | - | 573 | WP_032153703.1 | hypothetical protein | - |
| P1J22_RS23115 (4601705) | 4601705..4601854 | + | 150 | WP_001421645.1 | hypothetical protein | - |
| P1J22_RS23120 (4601974) | 4601974..4602540 | - | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| P1J22_RS23125 (4604137) | 4604137..4605741 | - | 1605 | WP_001067608.1 | YfjI family protein | - |
| P1J22_RS23130 (4606175) | 4606175..4606381 | + | 207 | WP_025492114.1 | hypothetical protein | - |
| P1J22_RS23135 (4606393) | 4606393..4606653 | - | 261 | WP_223362175.1 | hypothetical protein | - |
| P1J22_RS23140 (4606677) | 4606677..4606832 | + | 156 | WP_020923993.1 | hypothetical protein | - |
| P1J22_RS23145 (4606926) | 4606926..4607657 | - | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| P1J22_RS23150 (4609408) | 4609408..4610217 | + | 810 | WP_032153709.1 | hypothetical protein | - |
| P1J22_RS23155 (4610214) | 4610214..4611146 | - | 933 | WP_023155730.1 | hypothetical protein | - |
| P1J22_RS23160 (4611253) | 4611253..4612137 | + | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| P1J22_RS23165 (4612256) | 4612256..4612933 | + | 678 | WP_023155728.1 | hypothetical protein | - |
| P1J22_RS23170 (4612963) | 4612963..4613172 | + | 210 | WP_023155727.1 | DUF905 family protein | - |
| P1J22_RS23175 (4613263) | 4613263..4614081 | + | 819 | WP_001234693.1 | DUF932 domain-containing protein | - |
| P1J22_RS23180 (4614173) | 4614173..4614658 | + | 486 | WP_032153711.1 | antirestriction protein | - |
| P1J22_RS23185 (4614674) | 4614674..4615150 | + | 477 | WP_001186715.1 | RadC family protein | - |
| P1J22_RS23190 (4615219) | 4615219..4615440 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| P1J22_RS23195 (4615520) | 4615520..4615894 | + | 375 | WP_032153712.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| P1J22_RS23200 (4615941) | 4615941..4616318 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| P1J22_RS23205 (4616315) | 4616315..4616806 | + | 492 | WP_023155722.1 | DUF5983 family protein | - |
| P1J22_RS23210 (4616818) | 4616818..4617015 | + | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| P1J22_RS23215 (4617100) | 4617100..4617966 | + | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| P1J22_RS23220 (4618038) | 4618038..4618301 | + | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| P1J22_RS23225 (4618298) | 4618298..4618624 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| P1J22_RS23230 (4619088) | 4619088..4620350 | + | 1263 | WP_001218820.1 | Prophage integrase IntS ; Integrase | Integrase |
| P1J22_RS23235 (4620802) | 4620802..4624317 | + | 3516 | WP_000344091.1 | AAA domain-containing protein | - |
| P1J22_RS23240 (4624426) | 4624426..4625925 | - | 1500 | WP_001026222.1 | phosphoethanolamine transferase | - |
| P1J22_RS23245 (4626100) | 4626100..4626846 | - | 747 | WP_001350744.1 | invasion outer membrane protein Tia | - |
| P1J22_RS23250 (4627206) | 4627206..4628069 | - | 864 | Protein_4556 | Fimbrial adhesin PapG | VF |
| P1J22_RS23255 (4628147) | 4628147..4629070 | + | 924 | WP_001118645.1 | IS5 family transposase IS903B | Transposase |
| P1J22_RS23260 (4629126) | 4629126..4629947 | + | 822 | Protein_4558 | YfjP family GTPase | - |
| P1J22_RS23265 (4630150) | 4630150..4630830 | + | 681 | WP_032082725.1 | WYL domain-containing protein | - |
| P1J22_RS23270 (4630978) | 4630978..4631655 | + | 678 | WP_001097312.1 | hypothetical protein | - |
| P1J22_RS23275 (4631661) | 4631661..4631894 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| P1J22_RS23280 (4631984) | 4631984..4632802 | + | 819 | WP_001175142.1 | DUF932 domain-containing protein | - |
| P1J22_RS23285 (4632893) | 4632893..4633378 | + | 486 | WP_000860054.1 | antirestriction protein | - |
| P1J22_RS23290 (4633393) | 4633393..4633868 | + | 476 | Protein_4564 | RadC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|