MGE detailed information
MGE type: Genomic_island MGE length: 12735 bp
Accession: NZ_CP119577 Location: 607211..619945 Organism: Escherichia coli strain C012_chr Replicon: chromosome
Accession: NZ_CP119577 Location: 607211..619945 Organism: Escherichia coli strain C012_chr Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1J04_RS02960 (602212) | 602212..602646 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| P1J04_RS02965 (602664) | 602664..603542 | - | 879 | WP_001298758.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| P1J04_RS02970 (603532) | 603532..604311 | - | 780 | WP_112039668.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| P1J04_RS02975 (604322) | 604322..604795 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| P1J04_RS02980 (604818) | 604818..606098 | - | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| P1J04_RS02985 (606347) | 606347..607156 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| P1J04_RS02990 (607211) | 607211..607675 | - | 465 | WP_000347266.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| P1J04_RS02995 (607675) | 607675..608010 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| P1J04_RS03000 (608159) | 608159..609730 | - | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| P1J04_RS03005 (610105) | 610105..611439 | + | 1335 | WP_112039669.1 | galactarate/glucarate/glycerate transporter GarP | - |
| P1J04_RS03010 (611455) | 611455..612225 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| P1J04_RS03015 (612255) | 612255..613145 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| P1J04_RS03020 (613242) | 613242..614387 | + | 1146 | WP_001297158.1 | glycerate 2-kinase | - |
| P1J04_RS03030 (615152) | 615152..616132 | - | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| P1J04_RS03035 (616470) | 616470..617657 | - | 1188 | Protein_594 | YhaC family protein | - |
| P1J04_RS03040 (617679) | 617679..618218 | - | 540 | WP_000675746.1 | protein YhaB | - |
| P1J04_RS03045 (618474) | 618474..618692 | - | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| P1J04_RS03050 (619007) | 619007..619945 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| P1J04_RS03055 (620044) | 620044..621033 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| P1J04_RS03060 (621055) | 621055..622386 | + | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| P1J04_RS03065 (622412) | 622412..623620 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|