MGE detailed information
MGE type: Genomic_island MGE length: 29552 bp
Accession: NZ_CP119402 Location: 3999665..4029216 Organism: Escherichia coli strain MRE162 substr. FRA Replicon: chromosome
Accession: NZ_CP119402 Location: 3999665..4029216 Organism: Escherichia coli strain MRE162 substr. FRA Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PX810_RS19485 (3997263) | 3997263..3997988 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| PX810_RS19490 (3998025) | 3998025..3998564 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| PX810_RS19495 (3998629) | 3998629..3999183 | - | 555 | WP_000695589.1 | type 1 fimbrial major subunit FimA | - |
| PX810_RS19500 (3999665) | 3999665..4000261 | - | 597 | WP_097450870.1 | ISKra4 family transposase ISCep1 | VF |
| PX810_RS19505 (4000738) | 4000738..4001340 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| PX810_RS19510 (4002794) | 4002794..4003510 | + | 717 | WP_001360088.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| PX810_RS19515 (4003530) | 4003530..4004636 | + | 1107 | WP_001353974.1 | N-acetylneuraminate epimerase | - |
| PX810_RS19520 (4004701) | 4004701..4005681 | + | 981 | WP_001295601.1 | sialate O-acetylesterase | - |
| PX810_RS19525 (4005689) | 4005689..4006339 | - | 651 | WP_001037966.1 | HNH endonuclease | - |
| PX810_RS19530 (4006476) | 4006476..4006619 | + | 144 | Protein_3816 | HNH endonuclease | - |
| PX810_RS19535 (4007387) | 4007387..4007530 | - | 144 | Protein_3817 | hypothetical protein | - |
| PX810_RS19540 (4007615) | 4007615..4007812 | - | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| PX810_RS19545 (4007832) | 4007832..4008320 | - | 489 | WP_000777664.1 | DUF5983 family protein | - |
| PX810_RS19550 (4008317) | 4008317..4008694 | - | 378 | WP_000854919.1 | TA system toxin CbtA family protein | Toxin Detail |
| PX810_RS19555 (4008741) | 4008741..4009115 | - | 375 | WP_001285608.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| PX810_RS19560 (4009195) | 4009195..4009416 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| PX810_RS19565 (4009503) | 4009503..4009979 | - | 477 | WP_001560293.1 | RadC family protein | - |
| PX810_RS19570 (4009994) | 4009994..4010473 | - | 480 | WP_000706978.1 | antirestriction protein | - |
| PX810_RS19575 (4010739) | 4010739..4011557 | - | 819 | WP_001175165.1 | DUF932 domain-containing protein | - |
| PX810_RS19580 (4011647) | 4011647..4011880 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| PX810_RS19585 (4011886) | 4011886..4012563 | - | 678 | WP_001097302.1 | hypothetical protein | - |
| PX810_RS19590 (4012711) | 4012711..4013391 | - | 681 | WP_001282921.1 | WYL domain-containing protein | - |
| PX810_RS19595 (4013594) | 4013594..4014478 | - | 885 | WP_000010383.1 | 50S ribosome-binding GTPase | - |
| PX810_RS19600 (4014584) | 4014584..4015546 | + | 963 | WP_001672324.1 | hypothetical protein | - |
| PX810_RS19605 (4015543) | 4015543..4016397 | - | 855 | WP_000110727.1 | hypothetical protein | - |
| PX810_RS19610 (4018025) | 4018025..4018273 | - | 249 | WP_000573210.1 | hypothetical protein | - |
| PX810_RS19615 (4018378) | 4018378..4019109 | + | 732 | Protein_3833 | inovirus Gp2 family protein | - |
| PX810_RS19620 (4019619) | 4019619..4020071 | + | 453 | WP_001100706.1 | dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase | VF |
| PX810_RS19625 (4020500) | 4020500..4021101 | + | 602 | Protein_3835 | IS481 family transposase ISKpn28 | Transposase |
| PX810_RS19630 (4021090) | 4021090..4021305 | + | 216 | WP_095516826.1 | IS481 family transposase ISKpn28 | Transposase |
| PX810_RS19635 (4022723) | 4022723..4023289 | + | 567 | WP_001126811.1 | inovirus-type Gp2 protein | - |
| PX810_RS19640 (4023536) | 4023536..4024111 | + | 576 | WP_000991584.1 | hypothetical protein | - |
| PX810_RS19645 (4024180) | 4024180..4024416 | + | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| PX810_RS19650 (4024413) | 4024413..4024571 | + | 159 | WP_000831911.1 | hypothetical protein | - |
| PX810_RS19655 (4024659) | 4024659..4025207 | + | 549 | WP_001167422.1 | hypothetical protein | - |
| PX810_RS19660 (4025226) | 4025226..4025570 | - | 345 | Protein_3842 | ProQ/FINO family protein | - |
| PX810_RS19665 (4025876) | 4025876..4026049 | + | 174 | WP_153274857.1 | hypothetical protein | - |
| PX810_RS19670 (4026463) | 4026463..4026897 | + | 435 | WP_000038249.1 | H-NS family nucleoid-associated regulatory protein | - |
| PX810_RS19675 (4027314) | 4027314..4027883 | - | 570 | WP_001672323.1 | hypothetical protein | - |
| PX810_RS19680 (4027984) | 4027984..4029216 | - | 1233 | WP_000271620.1 | dNTP triphosphohydrolase | - |
| PX810_RS19690 (4030604) | 4030604..4030666 | + | 63 | WP_113705808.1 | hypothetical protein | - |
| PX810_RS19695 (4030677) | 4030677..4031374 | - | 698 | Protein_3849 | IS1-like element IS1F family transposase | - |
| PX810_RS19700 (4031461) | 4031461..4031529 | - | 69 | WP_211180522.1 | protein YkiE | - |
| PX810_RS19705 (4031666) | 4031666..4032187 | + | 522 | WP_001283626.1 | RNA polymerase sigma factor FecI | - |
| PX810_RS19710 (4032184) | 4032184..4033137 | + | 954 | WP_001068910.1 | ferric citrate uptake sigma factor regulator FecR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|