MGE detailed information
MGE type: Genomic_island MGE length: 12810 bp
Accession: NZ_CP119400 Location: 2331220..2344029 Organism: Escherichia coli strain MRE162 substr. NOR Replicon: chromosome
Accession: NZ_CP119400 Location: 2331220..2344029 Organism: Escherichia coli strain MRE162 substr. NOR Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PX809_RS11370 (2331220) | 2331220..2331486 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| PX809_RS11375 (2331486) | 2331486..2332808 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| PX809_RS11380 (2333120) | 2333120..2333328 | + | 209 | Protein_2224 | AraC family transcriptional regulator | - |
| PX809_RS11385 (2333583) | 2333583..2334809 | + | 1227 | Protein_2225 | Outer membrane usher protein FimD | VF |
| PX809_RS11390 (2334823) | 2334823..2335353 | + | 531 | WP_000876763.1 | Protein FimF | VF |
| PX809_RS11395 (2335366) | 2335366..2335869 | + | 504 | WP_000825452.1 | Protein FimG | VF |
| PX809_RS11400 (2335928) | 2335928..2336842 | + | 915 | WP_000520675.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| PX809_RS11405 (2337176) | 2337176..2339455 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| PX809_RS11410 (2339703) | 2339703..2339900 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| PX809_RS11415 (2339975) | 2339975..2340736 | + | 762 | WP_063091452.1 | acid stress response transcriptional regulator YdeO | - |
| PX809_RS11420 (2341138) | 2341138..2342820 | + | 1683 | WP_275772635.1 | sulfatase | - |
| PX809_RS11425 (2342872) | 2342872..2344029 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| PX809_RS11430 (2343995) | 2343995..2344117 | - | 123 | WP_120795387.1 | protein YneP | - |
| PX809_RS11435 (2344320) | 2344320..2346005 | + | 1686 | WP_275772638.1 | ABC transporter ATP-binding protein/permease | - |
| PX809_RS11440 (2346043) | 2346043..2348414 | + | 2372 | Protein_2236 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.004 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.004 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.006 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.004 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.004 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.004 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.004 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.004 |