MGE detailed information
MGE type: Prophage MGE length: 79246 bp
Accession: NZ_CP119165 Location: 1999420..2078665 Organism: Citrobacter freundii strain 2075 Replicon: chromosome
Accession: NZ_CP119165 Location: 1999420..2078665 Organism: Citrobacter freundii strain 2075 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P0S03_RS09670 () | 1994912..1995478 | + | 567 | WP_003034677.1 | VOC family protein | - |
| P0S03_RS09675 () | 1995481..1996227 | + | 747 | WP_172750376.1 | copper homeostasis protein CutC | - |
| P0S03_RS09680 () | 1996471..1997439 | - | 969 | WP_003839177.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| P0S03_RS09685 () | 1997436..1998179 | - | 744 | WP_003034686.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| P0S03_RS09690 () | 1998220..1998615 | - | 396 | WP_172750377.1 | MAPEG family protein | - |
| P0S03_RS09695 () | 1998668..1999441 | - | 774 | Protein_1894 | DUF72 domain-containing protein | - |
| P0S03_RS09700 () | 1999420..2000733 | - | 1314 | WP_283903464.1 | Putative defective protein IntQ ; Integrase | Integrase |
| P0S03_RS09705 () | 2000789..2001025 | - | 237 | WP_181636577.1 | excisionase family protein | - |
| P0S03_RS09710 () | 2001033..2001200 | - | 168 | Protein_1897 | ATPase | - |
| P0S03_RS09715 () | 2001701..2001925 | - | 225 | WP_024262723.1 | hypothetical protein | - |
| P0S03_RS09720 () | 2001922..2002488 | - | 567 | WP_094542914.1 | hypothetical protein | - |
| P0S03_RS09725 () | 2002485..2003315 | - | 831 | WP_194208855.1 | BRO family protein | - |
| P0S03_RS09730 () | 2003327..2003905 | - | 579 | WP_016150515.1 | hypothetical protein | - |
| P0S03_RS09735 () | 2003902..2004324 | - | 423 | WP_016150514.1 | hypothetical protein | - |
| P0S03_RS09740 () | 2004317..2004547 | - | 231 | WP_283903465.1 | hypothetical protein | - |
| P0S03_RS09745 () | 2004547..2004903 | - | 357 | WP_032948002.1 | hypothetical protein | - |
| P0S03_RS09750 () | 2005003..2005296 | - | 294 | WP_230127271.1 | hypothetical protein | - |
| P0S03_RS09755 () | 2005358..2005783 | - | 426 | WP_071701006.1 | hypothetical protein | - |
| P0S03_RS09760 () | 2005780..2005971 | - | 192 | WP_094542907.1 | hypothetical protein | - |
| P0S03_RS09765 () | 2005968..2006171 | - | 204 | WP_016150507.1 | hypothetical protein | - |
| P0S03_RS09770 () | 2006452..2007159 | - | 708 | WP_016150506.1 | helix-turn-helix transcriptional regulator | - |
| P0S03_RS09775 () | 2007494..2007691 | + | 198 | WP_080100505.1 | DUF4222 domain-containing protein | - |
| P0S03_RS09780 () | 2007688..2008611 | + | 924 | WP_080100504.1 | helix-turn-helix domain-containing protein | - |
| P0S03_RS09785 () | 2008718..2010589 | + | 1872 | WP_080100503.1 | toprim domain-containing protein | - |
| P0S03_RS09790 () | 2010592..2010915 | + | 324 | WP_058671178.1 | hypothetical protein | - |
| P0S03_RS09795 () | 2010912..2011727 | + | 816 | WP_283903466.1 | antitermination protein | - |
| P0S03_RS09800 () | 2012018..2012704 | + | 687 | WP_080100500.1 | Rha family transcriptional regulator | - |
| P0S03_RS09805 () | 2012855..2013352 | + | 498 | WP_000423994.1 | hypothetical protein | - |
| P0S03_RS09810 () | 2013797..2014075 | + | 279 | WP_001568784.1 | phage holin | - |
| P0S03_RS09815 () | 2014047..2014595 | + | 549 | WP_137397347.1 | lysozyme | - |
| P0S03_RS09820 () | 2014592..2015110 | + | 519 | WP_283903467.1 | DUF2514 domain-containing protein | - |
| P0S03_RS09825 () | 2015140..2015337 | + | 198 | WP_016150493.1 | hypothetical protein | - |
| P0S03_RS09830 () | 2015434..2015742 | + | 309 | WP_016150492.1 | hypothetical protein | - |
| P0S03_RS09835 () | 2016174..2016389 | + | 216 | WP_283903468.1 | hypothetical protein | - |
| P0S03_RS09840 () | 2016377..2016727 | + | 351 | WP_003841739.1 | HNH endonuclease signature motif containing protein | - |
| P0S03_RS09845 () | 2016884..2017381 | + | 498 | WP_003841734.1 | phage terminase small subunit P27 family | - |
| P0S03_RS09850 () | 2017381..2019138 | + | 1758 | WP_153753408.1 | terminase large subunit | - |
| P0S03_RS09855 () | 2019149..2019334 | + | 186 | WP_088731911.1 | hypothetical protein | - |
| P0S03_RS09860 () | 2019334..2020563 | + | 1230 | WP_283903469.1 | phage portal protein | - |
| P0S03_RS09865 () | 2020550..2021203 | + | 654 | WP_169328790.1 | HK97 family phage prohead protease | - |
| P0S03_RS09870 () | 2021217..2022425 | + | 1209 | WP_283903470.1 | phage major capsid protein | - |
| P0S03_RS09875 () | 2022464..2022742 | + | 279 | WP_283903471.1 | hypothetical protein | - |
| P0S03_RS09880 () | 2022739..2023062 | + | 324 | WP_048221283.1 | head-tail connector protein | - |
| P0S03_RS09885 () | 2023072..2023410 | + | 339 | WP_057107378.1 | phage head closure protein | - |
| P0S03_RS09890 () | 2023407..2023856 | + | 450 | WP_048217940.1 | HK97 gp10 family phage protein | - |
| P0S03_RS09895 () | 2023853..2024200 | + | 348 | WP_149608344.1 | DUF3168 domain-containing protein | - |
| P0S03_RS09900 () | 2024258..2024962 | + | 705 | WP_103284059.1 | phage tail protein | - |
| P0S03_RS09905 () | 2024990..2025361 | + | 372 | WP_283903472.1 | phage tail assembly chaperone | - |
| P0S03_RS09910 () | 2025373..2025663 | + | 291 | WP_063922521.1 | DUF4035 domain-containing protein | - |
| P0S03_RS09915 () | 2025721..2025909 | + | 189 | WP_016042208.1 | YebO family protein | - |
| P0S03_RS09920 () | 2025952..2029236 | + | 3285 | WP_283903500.1 | phage tail tape measure protein | - |
| P0S03_RS09925 () | 2029311..2029523 | - | 213 | WP_200015038.1 | hypothetical protein | - |
| P0S03_RS09930 () | 2029673..2030266 | + | 594 | WP_283903473.1 | hypothetical protein | - |
| P0S03_RS09935 () | 2030266..2030850 | + | 585 | WP_048217931.1 | hypothetical protein | - |
| P0S03_RS09940 () | 2030857..2031255 | + | 399 | WP_174330700.1 | hypothetical protein | - |
| P0S03_RS09945 () | 2031255..2033966 | + | 2712 | WP_283903474.1 | DUF1983 domain-containing protein | - |
| P0S03_RS09950 () | 2033966..2034910 | + | 945 | WP_151532611.1 | DUF6453 family protein | - |
| P0S03_RS09955 () | 2034920..2036245 | + | 1326 | WP_283903475.1 | phage tail protein | - |
| P0S03_RS09960 () | 2036381..2036623 | - | 243 | WP_038642073.1 | DinI family protein | - |
| P0S03_RS09965 () | 2036645..2037091 | + | 447 | WP_230389137.1 | S24 family peptidase | - |
| P0S03_RS09970 () | 2037594..2037689 | - | 96 | Protein_1949 | hypothetical protein | - |
| P0S03_RS09975 () | 2037686..2038252 | - | 567 | WP_060855103.1 | hydrolase | - |
| P0S03_RS09980 () | 2038519..2040291 | + | 1773 | WP_032935372.1 | aspartate--tRNA ligase | - |
| P0S03_RS09985 () | 2040293..2040736 | + | 444 | WP_003844155.1 | dihydroneopterin triphosphate diphosphatase | - |
| P0S03_RS09990 () | 2040765..2041508 | + | 744 | WP_003034865.1 | putative transcriptional regulatory protein YebC | VF |
| P0S03_RS09995 () | 2041543..2042064 | + | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| P0S03_RS10000 () | 2042145..2042756 | + | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| P0S03_RS10005 () | 2042765..2043775 | + | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| P0S03_RS10010 () | 2043854..2044639 | - | 786 | WP_172750765.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| P0S03_RS10015 () | 2044636..2045391 | - | 756 | WP_003034877.1 | Zinc import ATP-binding protein ZnuC | VF |
| P0S03_RS10020 () | 2045470..2046414 | + | 945 | WP_003844151.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| P0S03_RS10025 () | 2046430..2047749 | + | 1320 | WP_172750764.1 | murein DD-endopeptidase MepM | - |
| P0S03_RS10030 () | 2047869..2048840 | + | 972 | WP_003841672.1 | Lipid A biosynthesis myristoyltransferase | VF |
| P0S03_RS10035 () | 2048884..2050326 | - | 1443 | WP_003034890.1 | pyruvate kinase | - |
| P0S03_RS10040 () | 2050445..2051314 | - | 870 | WP_003034893.1 | MurR/RpiR family transcriptional regulator | - |
| P0S03_RS10045 () | 2051682..2053157 | + | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| P0S03_RS10050 () | 2053391..2055202 | + | 1812 | WP_270155335.1 | phosphogluconate dehydratase | - |
| P0S03_RS10055 () | 2055237..2055878 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| P0S03_RS10060 () | 2055945..2057123 | - | 1179 | WP_071684720.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| P0S03_RS10065 () | 2057255..2057545 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| P0S03_RS10070 () | 2057667..2058020 | + | 354 | WP_003034909.1 | protein YebF | - |
| P0S03_RS10075 () | 2058115..2058774 | + | 660 | WP_172750762.1 | tellurite resistance TerB family protein | - |
| P0S03_RS10080 () | 2058861..2060915 | + | 2055 | WP_174775182.1 | oligopeptidase B | - |
| P0S03_RS10085 () | 2060906..2061568 | - | 663 | WP_003833802.1 | exodeoxyribonuclease X | - |
| P0S03_RS10090 () | 2061592..2062248 | - | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| P0S03_RS10095 () | 2062355..2062585 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| P0S03_RS10100 () | 2062734..2063561 | + | 828 | WP_238788063.1 | recombinase family protein | - |
| P0S03_RS10110 () | 2064809..2065507 | + | 699 | WP_283903476.1 | inovirus-type Gp2 protein | - |
| P0S03_RS10115 () | 2065810..2066076 | - | 267 | WP_181561943.1 | hypothetical protein | - |
| P0S03_RS10120 () | 2066278..2066856 | - | 579 | WP_172750899.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| P0S03_RS10125 () | 2067101..2068852 | - | 1752 | WP_151532619.1 | hypothetical protein | - |
| P0S03_RS10130 () | 2069853..2070200 | + | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| P0S03_RS10135 () | 2070250..2071785 | + | 1536 | WP_001000409.1 | IS66 family transposase ISSgsp1 | Transposase |
| P0S03_RS10140 () | 2071858..2072244 | + | 387 | WP_172750526.1 | hypothetical protein | - |
| P0S03_RS10145 () | 2072407..2073042 | - | 636 | WP_225990727.1 | hypothetical protein | - |
| P0S03_RS10150 () | 2073054..2073299 | - | 246 | WP_115454751.1 | hypothetical protein | - |
| P0S03_RS10155 () | 2073490..2073699 | + | 210 | WP_115454752.1 | hypothetical protein | - |
| P0S03_RS10160 () | 2073956..2074330 | + | 375 | WP_003034928.1 | CopC domain-containing protein YobA | - |
| P0S03_RS10165 () | 2074334..2075206 | + | 873 | WP_003034931.1 | copper homeostasis membrane protein CopD | - |
| P0S03_RS10170 () | 2075227..2075565 | + | 339 | WP_003034934.1 | YebY family protein | - |
| - | 2075686..2075829 | - | 144 | - | - | Antitoxin Detail |
| - | 2075721..2075824 | + | 104 | - | - | Toxin Detail |
| P0S03_RS10175 () | 2075971..2076612 | + | 642 | WP_016150398.1 | protein-serine/threonine phosphatase | - |
| P0S03_RS10180 () | 2076613..2076804 | - | 192 | WP_003034941.1 | YebW family protein | - |
| P0S03_RS10185 () | 2076907..2077143 | - | 237 | WP_029139506.1 | YebV family protein | - |
| P0S03_RS10190 () | 2077244..2078665 | - | 1422 | WP_086529330.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| P0S03_RS10195 () | 2078745..2081378 | - | 2634 | WP_003034947.1 | PqiB family protein | - |
| P0S03_RS10200 () | 2081347..2082630 | - | 1284 | WP_003841983.1 | membrane integrity lipid transport subunit YebS | - |
| P0S03_RS10205 () | 2082759..2083256 | + | 498 | WP_003034953.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|