MGE detailed information
MGE type: Prophage MGE length: 52982 bp
Accession: NZ_CP119137 Location: 1962851..2015832 Organism: Salmonella enterica subsp. enterica serovar Goldcoast isolate Sal02792 Replicon: chromosome
Accession: NZ_CP119137 Location: 1962851..2015832 Organism: Salmonella enterica subsp. enterica serovar Goldcoast isolate Sal02792 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P0D85_RS10550 () | 1958589..1959041 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| P0D85_RS10555 () | 1959071..1959811 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| P0D85_RS10560 () | 1959848..1960369 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| P0D85_RS10565 () | 1960371..1960970 | - | 600 | WP_000716749.1 | YebB family permuted papain-like enzyme | - |
| P0D85_RS10570 () | 1961179..1961871 | + | 693 | WP_000227320.1 | hypothetical protein | - |
| P0D85_RS10575 () | 1962231..1962842 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| P0D85_RS10580 () | 1962851..1963861 | + | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| P0D85_RS10585 () | 1963940..1964725 | - | 786 | WP_000571508.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| P0D85_RS10590 () | 1964722..1965477 | - | 756 | WP_000203013.1 | Zinc import ATP-binding protein ZnuC | VF |
| P0D85_RS10595 () | 1965556..1966500 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| P0D85_RS10600 () | 1966516..1967835 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| P0D85_RS10605 () | 1967952..1968923 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| P0D85_RS10610 () | 1968996..1970438 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| P0D85_RS10615 () | 1970562..1971431 | - | 870 | WP_020898861.1 | MurR/RpiR family transcriptional regulator | - |
| P0D85_RS10620 () | 1971773..1973248 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| P0D85_RS10625 () | 1973483..1975294 | + | 1812 | WP_001069124.1 | phosphogluconate dehydratase | - |
| P0D85_RS10630 () | 1975332..1975973 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| P0D85_RS10635 () | 1976073..1977251 | - | 1179 | WP_000173428.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| P0D85_RS10640 () | 1977382..1977672 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| P0D85_RS10645 () | 1977740..1978093 | + | 354 | WP_001042119.1 | protein YebF | - |
| P0D85_RS10650 () | 1978187..1978846 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| P0D85_RS10655 () | 1979059..1981110 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| P0D85_RS10660 () | 1981147..1981845 | - | 699 | WP_000944285.1 | exodeoxyribonuclease X | - |
| P0D85_RS10665 () | 1981869..1982525 | - | 657 | WP_000100256.1 | nitrilase-related carbon-nitrogen hydrolase | - |
| P0D85_RS10670 () | 1982633..1982863 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| P0D85_RS10675 () | 1983001..1983375 | + | 375 | WP_000168396.1 | CopC domain-containing protein YobA | - |
| P0D85_RS10680 () | 1983376..1984251 | + | 876 | WP_000979699.1 | copper homeostasis membrane protein CopD | - |
| P0D85_RS10685 () | 1984268..1984621 | + | 354 | WP_126524015.1 | YebY family protein | - |
| - | 1984723..1984866 | - | 144 | - | - | Antitoxin Detail |
| - | 1984761..1984864 | + | 104 | - | - | Toxin Detail |
| P0D85_RS10690 () | 1984995..1985645 | - | 651 | Protein_1842 | hypothetical protein ; Integrase | Integrase |
| P0D85_RS10695 () | 1985656..1985961 | + | 306 | WP_206519696.1 | hypothetical protein | - |
| P0D85_RS10700 () | 1985918..1986121 | + | 204 | Protein_1844 | phage tail protein | - |
| P0D85_RS10705 () | 1986293..1986448 | + | 156 | Protein_1845 | phage tail protein | - |
| P0D85_RS10710 () | 1986554..1986886 | + | 333 | WP_061383450.1 | DUF1353 domain-containing protein | - |
| P0D85_RS10715 () | 1986935..1987044 | + | 110 | Protein_1847 | tail fiber assembly protein | - |
| P0D85_RS10720 () | 1987135..1987320 | - | 186 | WP_012218702.1 | PagK family vesicle-borne virulence factor | - |
| P0D85_RS10725 () | 1987572..1987760 | - | 189 | Protein_1849 | tail fiber assembly protein | - |
| P0D85_RS10730 () | 1987756..1988526 | - | 771 | WP_000758583.1 | transporter substrate-binding domain-containing protein | - |
| P0D85_RS10735 () | 1989017..1989145 | + | 129 | Protein_1851 | helix-turn-helix domain-containing protein | - |
| P0D85_RS10740 () | 1989174..1989974 | - | 801 | WP_079944157.1 | hypothetical protein | - |
| P0D85_RS10745 () | 1990914..1991222 | - | 309 | Protein_1853 | hypothetical protein ; Integrase | Integrase |
| P0D85_RS10750 () | 1991221..1991585 | - | 365 | Protein_1854 | recombinase RecT | - |
| P0D85_RS10755 () | 1991582..1991692 | + | 111 | Protein_1855 | replication protein | - |
| P0D85_RS10760 () | 1991707..1992102 | + | 396 | WP_024798200.1 | DUF977 family protein | - |
| P0D85_RS10765 () | 1992389..1993519 | - | 1131 | WP_126524016.1 | GGDEF domain-containing protein | - |
| P0D85_RS10770 () | 1993915..1995894 | + | 1980 | WP_024798201.1 | alkyl sulfatase dimerization domain-containing protein | - |
| P0D85_RS10775 () | 1996303..1996917 | - | 615 | WP_126524017.1 | disulfide bond formation protein B | - |
| P0D85_RS10780 () | 1996927..1997085 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| P0D85_RS10785 () | 1997218..1998132 | - | 915 | WP_001233453.1 | DMT family transporter | - |
| P0D85_RS10790 () | 1999388..1999801 | - | 414 | WP_080094825.1 | hypothetical protein ; Integrase | Integrase |
| P0D85_RS10795 () | 1999925..2001133 | + | 1209 | Protein_1863 | IS256 family transposase ISEc39 | Transposase |
| P0D85_RS10800 () | 2001279..2001419 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| P0D85_RS10805 () | 2001588..2001854 | - | 267 | WP_077248438.1 | hypothetical protein | - |
| P0D85_RS10810 () | 2002224..2002643 | + | 420 | WP_000354410.1 | GNAT family N-acetyltransferase | - |
| P0D85_RS10815 () | 2002879..2003037 | - | 159 | WP_072274730.1 | lipopolysaccharide 1,2-N-acetylglucosaminetransferase | - |
| P0D85_RS10820 () | 2003061..2003309 | + | 249 | Protein_1868 | glycosyltransferase | - |
| P0D85_RS10825 () | 2003354..2003881 | - | 528 | WP_167760988.1 | hypothetical protein | - |
| P0D85_RS10830 () | 2004859..2005597 | - | 739 | Protein_1870 | hypothetical protein ; Integrase | Integrase |
| P0D85_RS10835 () | 2005716..2006729 | - | 1014 | WP_071991613.1 | acyltransferase family protein | - |
| P0D85_RS10840 () | 2007426..2007629 | - | 204 | WP_024798203.1 | hypothetical protein | VF |
| P0D85_RS10845 () | 2007813..2008058 | - | 246 | WP_001051755.1 | hypothetical protein | - |
| P0D85_RS10850 () | 2009687..2010163 | - | 477 | WP_063809171.1 | hypothetical protein | - |
| P0D85_RS10855 () | 2010492..2010887 | - | 396 | WP_063809172.1 | DUF1398 domain-containing protein | - |
| P0D85_RS10860 () | 2011571..2012293 | + | 723 | WP_126524018.1 | Guanine nucleotide exchange factor sopE2 | VF |
| P0D85_RS10865 () | 2012578..2012742 | + | 165 | WP_001134853.1 | hypothetical protein | - |
| P0D85_RS10870 () | 2012966..2013616 | + | 651 | WP_023226864.1 | protein-serine/threonine phosphatase | - |
| P0D85_RS10875 () | 2013635..2013826 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| P0D85_RS10880 () | 2013937..2014173 | - | 237 | WP_024131167.1 | YebV family protein | - |
| P0D85_RS10885 () | 2014291..2015730 | - | 1440 | WP_126524019.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| P0D85_RS10890 () | 2015808..2018441 | - | 2634 | WP_001747692.1 | PqiB family protein | - |
| P0D85_RS10895 () | 2018410..2019693 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| P0D85_RS10900 () | 2019822..2020319 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|