MGE detailed information
MGE type: Prophage MGE length: 44523 bp
Accession: NZ_CP119127 Location: 281490..326012 Organism: Sphingobium sp. WTD-1 Replicon: chromosome
Accession: NZ_CP119127 Location: 281490..326012 Organism: Sphingobium sp. WTD-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N6H05_RS01355 (N6H05_01355) | 277264..278682 | + | 1419 | WP_284112398.1 | MFS transporter | - |
| N6H05_RS01360 (N6H05_01360) | 278714..279652 | + | 939 | WP_284112399.1 | TauD/TfdA family dioxygenase | - |
| N6H05_RS01365 (N6H05_01365) | 279745..281379 | + | 1635 | WP_284112400.1 | arylsulfatase | - |
| N6H05_RS01370 (N6H05_01370) | 281532..282317 | + | 786 | WP_284114142.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| N6H05_RS01375 (N6H05_01375) | 282363..283880 | + | 1518 | WP_284112401.1 | RNA polymerase factor sigma-54 | - |
| N6H05_RS01380 (N6H05_01380) | 284088..284939 | + | 852 | WP_284112403.1 | D-amino-acid transaminase | - |
| N6H05_RS01385 (N6H05_01385) | 285162..286151 | + | 990 | WP_284114144.1 | MarR family transcriptional regulator | - |
| N6H05_RS01390 (N6H05_01390) | 286166..286366 | - | 201 | WP_284112404.1 | hypothetical protein | - |
| N6H05_RS01395 (N6H05_01395) | 286594..287664 | - | 1071 | WP_284112405.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| N6H05_RS01400 (N6H05_01400) | 287669..287950 | - | 282 | WP_284112406.1 | helix-turn-helix domain-containing protein | - |
| N6H05_RS01405 (N6H05_01405) | 287947..288483 | - | 537 | WP_284112408.1 | hypothetical protein | - |
| N6H05_RS01410 (N6H05_01410) | 288480..290282 | - | 1803 | WP_284112409.1 | DNA cytosine methyltransferase | - |
| N6H05_RS01415 (N6H05_01415) | 290282..290776 | - | 495 | WP_284112411.1 | hypothetical protein | - |
| N6H05_RS01420 (N6H05_01420) | 290773..290934 | - | 162 | WP_284112412.1 | hypothetical protein | - |
| N6H05_RS01425 (N6H05_01425) | 291044..291247 | - | 204 | WP_284112413.1 | hypothetical protein | - |
| N6H05_RS01430 (N6H05_01430) | 291244..291534 | - | 291 | WP_284112414.1 | hypothetical protein | - |
| N6H05_RS01435 (N6H05_01435) | 291551..291859 | - | 309 | WP_284112415.1 | hypothetical protein | - |
| N6H05_RS01440 (N6H05_01440) | 291852..292049 | - | 198 | WP_284112416.1 | hypothetical protein | - |
| N6H05_RS01445 (N6H05_01445) | 292046..294685 | - | 2640 | WP_284112418.1 | toprim domain-containing protein | - |
| N6H05_RS01450 (N6H05_01450) | 294682..294909 | - | 228 | WP_284112419.1 | hypothetical protein | - |
| N6H05_RS01455 (N6H05_01455) | 294978..295346 | - | 369 | WP_284112420.1 | ogr/Delta-like zinc finger family protein | - |
| N6H05_RS01460 (N6H05_01460) | 295343..295801 | - | 459 | WP_284112421.1 | hypothetical protein | - |
| N6H05_RS01465 (N6H05_01465) | 295798..296076 | - | 279 | WP_284112422.1 | hypothetical protein | - |
| N6H05_RS01470 (N6H05_01470) | 296073..296417 | - | 345 | WP_284112423.1 | YdaS family helix-turn-helix protein | - |
| N6H05_RS01475 (N6H05_01475) | 296416..297168 | + | 753 | WP_284112425.1 | S24 family peptidase | - |
| N6H05_RS01480 (N6H05_01480) | 297171..297590 | + | 420 | WP_284112427.1 | HIRAN domain-containing protein | - |
| N6H05_RS01485 (N6H05_01485) | 297616..298335 | + | 720 | WP_284112428.1 | hypothetical protein | - |
| N6H05_RS01490 (N6H05_01490) | 298332..299321 | - | 990 | WP_284112429.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| N6H05_RS01495 (N6H05_01495) | 299318..299725 | - | 408 | WP_284112430.1 | phage tail protein | - |
| N6H05_RS01500 (N6H05_01500) | 299856..300248 | - | 393 | WP_284112431.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| N6H05_RS01505 (N6H05_01505) | 300289..300471 | - | 183 | WP_284112432.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| N6H05_RS01510 (N6H05_01510) | 300546..302786 | - | 2241 | WP_284112433.1 | phage tail tape measure protein | - |
| N6H05_RS01515 (N6H05_01515) | 302786..302917 | - | 132 | WP_284112434.1 | GpE family phage tail protein | - |
| N6H05_RS01520 (N6H05_01520) | 302917..303270 | - | 354 | WP_284112436.1 | phage tail assembly protein | - |
| N6H05_RS01525 (N6H05_01525) | 303393..303902 | - | 510 | WP_284112437.1 | phage major tail tube protein | - |
| N6H05_RS01530 (N6H05_01530) | 303931..305085 | - | 1155 | WP_284112438.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| N6H05_RS01535 (N6H05_01535) | 305096..305449 | - | 354 | WP_284112439.1 | GPW/gp25 family protein | - |
| N6H05_RS01540 (N6H05_01540) | 305521..306099 | - | 579 | WP_284112440.1 | phage baseplate assembly protein V | - |
| N6H05_RS01545 (N6H05_01545) | 306096..306245 | - | 150 | WP_284112441.1 | hypothetical protein | - |
| N6H05_RS01550 (N6H05_01550) | 306242..306463 | - | 222 | WP_063140733.1 | hypothetical protein | - |
| N6H05_RS01555 (N6H05_01555) | 306460..307182 | - | 723 | WP_284112443.1 | hypothetical protein | - |
| N6H05_RS01560 (N6H05_01560) | 307179..307541 | - | 363 | WP_284112444.1 | hypothetical protein | - |
| N6H05_RS01565 (N6H05_01565) | 307745..308581 | - | 837 | WP_284112445.1 | hypothetical protein | - |
| N6H05_RS01570 (N6H05_01570) | 308593..310260 | - | 1668 | WP_284112446.1 | hypothetical protein | - |
| N6H05_RS01575 (N6H05_01575) | 310273..311022 | - | 750 | WP_284112447.1 | hypothetical protein | - |
| N6H05_RS01580 (N6H05_01580) | 311033..312655 | - | 1623 | WP_284112448.1 | hypothetical protein | - |
| N6H05_RS01585 (N6H05_01585) | 312659..313096 | - | 438 | WP_284112449.1 | hypothetical protein | - |
| N6H05_RS01590 (N6H05_01590) | 313099..314133 | - | 1035 | WP_284112450.1 | hypothetical protein | - |
| N6H05_RS01595 (N6H05_01595) | 314135..314782 | - | 648 | WP_284112451.1 | phage tail protein I | - |
| N6H05_RS01600 (N6H05_01600) | 314782..315633 | - | 852 | WP_284112452.1 | baseplate J/gp47 family protein | - |
| N6H05_RS01605 (N6H05_01605) | 315710..316192 | - | 483 | WP_284112453.1 | phage virion morphogenesis protein | - |
| N6H05_RS01610 (N6H05_01610) | 316185..316652 | - | 468 | WP_284112454.1 | phage tail protein | - |
| N6H05_RS01615 (N6H05_01615) | 316657..316869 | - | 213 | WP_284112455.1 | tail protein X | - |
| N6H05_RS01620 (N6H05_01620) | 316866..317072 | - | 207 | WP_284112456.1 | hypothetical protein | - |
| N6H05_RS01625 (N6H05_01625) | 317072..317566 | - | 495 | WP_284112457.1 | head completion/stabilization protein | - |
| N6H05_RS01630 (N6H05_01630) | 317675..318436 | - | 762 | WP_284112458.1 | phage terminase small subunit | - |
| N6H05_RS01635 (N6H05_01635) | 318592..319719 | - | 1128 | WP_284112459.1 | phage major capsid protein, P2 family | - |
| N6H05_RS01640 (N6H05_01640) | 319766..320599 | - | 834 | WP_284112460.1 | GPO family capsid scaffolding protein | - |
| N6H05_RS01645 (N6H05_01645) | 320755..322689 | + | 1935 | WP_284112461.1 | terminase family protein | - |
| N6H05_RS01650 (N6H05_01650) | 322700..323782 | + | 1083 | WP_284112462.1 | phage portal protein | - |
| N6H05_RS01655 (N6H05_01655) | 323850..324272 | + | 423 | WP_284112463.1 | low molecular weight phosphotyrosine protein phosphatase | - |
| N6H05_RS01660 (N6H05_01660) | 324316..324507 | - | 192 | WP_284112464.1 | hypothetical protein | - |
| N6H05_RS01665 (N6H05_01665) | 324507..324680 | - | 174 | WP_284112466.1 | hypothetical protein | - |
| N6H05_RS01670 (N6H05_01670) | 324799..325089 | + | 291 | WP_284112467.1 | hypothetical protein | - |
| N6H05_RS01675 (N6H05_01675) | 325182..326012 | + | 831 | WP_284112468.1 | BRO family protein | - |
| N6H05_RS01685 (N6H05_01685) | 327025..327204 | + | 180 | WP_284112469.1 | hypothetical protein | - |
| N6H05_RS01690 (N6H05_01690) | 327258..327485 | + | 228 | WP_007709509.1 | zinc-finger domain-containing protein | - |
| N6H05_RS01695 (N6H05_01695) | 327542..328984 | + | 1443 | WP_284112470.1 | metalloprotease TldD | - |
| N6H05_RS01700 (N6H05_01700) | 329072..329647 | + | 576 | WP_284112471.1 | DUF924 family protein | - |
| N6H05_RS01705 (N6H05_01705) | 329804..330142 | + | 339 | WP_004209785.1 | P-II family nitrogen regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|