MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 37257 bp
Accession: NZ_CP119125 Location: 1..37257 Organism: Escherichia coli strain GENOMIC22-004 Replicon: plasmid pCFSAN126949_05
Accession: NZ_CP119125 Location: 1..37257 Organism: Escherichia coli strain GENOMIC22-004 Replicon: plasmid pCFSAN126949_05
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PYZ88_RS25300 (PYZ88_25260) | 77..580 | - | 504 | WP_000781813.1 | relaxosome-coupling protein TaxA | - |
| PYZ88_RS25305 (PYZ88_25265) | 936..1067 | - | 132 | WP_001353745.1 | toxin-antitoxin system HicB family antitoxin | - |
| PYZ88_RS25310 (PYZ88_25270) | 1412..1705 | - | 294 | WP_044344513.1 | hypothetical protein | - |
| PYZ88_RS25315 (PYZ88_25275) | 1720..2094 | - | 375 | WP_000844303.1 | tail-associated lysozyme | - |
| PYZ88_RS25320 (PYZ88_25280) | 2146..2445 | - | 300 | WP_000650311.1 | hypothetical protein | - |
| PYZ88_RS25325 (PYZ88_25285) | 2899..3126 | - | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| PYZ88_RS25330 (PYZ88_25290) | 3113..3364 | - | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| PYZ88_RS25335 (PYZ88_25295) | 3361..3903 | - | 543 | WP_001083906.1 | hypothetical protein | - |
| PYZ88_RS25340 (PYZ88_25300) | 4008..4523 | - | 516 | WP_001025395.1 | J domain-containing protein | - |
| PYZ88_RS25345 (PYZ88_25305) | 5163..5513 | - | 351 | WP_000127482.1 | addiction module antitoxin | - |
| PYZ88_RS25350 (PYZ88_25310) | 5510..5845 | - | 336 | WP_001147119.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PYZ88_RS25355 (PYZ88_25315) | 7389..8396 | + | 1008 | WP_000243324.1 | replication initiation protein | - |
| PYZ88_RS25360 (PYZ88_25320) | 8462..8866 | + | 405 | WP_085452281.1 | hypothetical protein | - |
| PYZ88_RS25365 (PYZ88_25325) | 9001..9528 | + | 528 | WP_085452280.1 | DUF2726 domain-containing protein | - |
| PYZ88_RS25370 (PYZ88_25330) | 10112..10363 | - | 252 | WP_000928750.1 | hypothetical protein | - |
| PYZ88_RS25375 (PYZ88_25335) | 10399..10701 | - | 303 | WP_001096507.1 | hypothetical protein | - |
| PYZ88_RS25380 (PYZ88_25340) | 10795..11454 | - | 660 | WP_000516222.1 | hypothetical protein | VF |
| PYZ88_RS25385 (PYZ88_25345) | 11559..12383 | - | 825 | WP_001353741.1 | Tyrosine recombinase XerD | VF |
| PYZ88_RS25390 (PYZ88_25350) | 12796..13593 | + | 798 | WP_072662038.1 | malate dehydrogenase | - |
| PYZ88_RS25395 (PYZ88_25355) | 13710..14666 | - | 957 | WP_001281417.1 | Abi family protein | - |
| PYZ88_RS25400 | 14804..15175 | - | 372 | WP_010378363.1 | hypothetical protein | - |
| PYZ88_RS25405 (PYZ88_25360) | 15166..15447 | - | 282 | WP_096268840.1 | hypothetical protein | - |
| PYZ88_RS25410 (PYZ88_25365) | 15500..16291 | + | 792 | WP_050394548.1 | hypothetical protein | - |
| PYZ88_RS25415 (PYZ88_25370) | 16601..16912 | - | 312 | WP_023157208.1 | hypothetical protein | - |
| PYZ88_RS25420 (PYZ88_25375) | 16932..17588 | - | 657 | WP_000972912.1 | hypothetical protein | - |
| PYZ88_RS25425 (PYZ88_25380) | 17692..18156 | - | 465 | WP_001293141.1 | H-NS family nucleoid-associated regulatory protein | - |
| PYZ88_RS25430 (PYZ88_25385) | 18172..18378 | - | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| PYZ88_RS25435 (PYZ88_25390) | 18375..20528 | - | 2154 | WP_001235750.1 | type IA DNA topoisomerase | - |
| PYZ88_RS25440 (PYZ88_25395) | 20533..21108 | - | 576 | WP_085452284.1 | DNA topoisomerase III | - |
| PYZ88_RS25445 (PYZ88_25400) | 21214..21618 | - | 405 | WP_001218543.1 | hypothetical protein | - |
| PYZ88_RS25450 (PYZ88_25405) | 21634..22128 | - | 495 | WP_001215680.1 | thermonuclease family protein | - |
| PYZ88_RS25455 (PYZ88_25410) | 22125..22433 | - | 309 | WP_000647576.1 | hypothetical protein | - |
| PYZ88_RS25460 (PYZ88_25415) | 22536..22790 | - | 255 | WP_000415096.1 | hypothetical protein | - |
| PYZ88_RS25465 (PYZ88_25420) | 22796..23101 | - | 306 | WP_000147044.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| PYZ88_RS25470 (PYZ88_25425) | 23085..23507 | - | 423 | WP_015059903.1 | cag pathogenicity island Cag12 family protein | - |
| PYZ88_RS25475 (PYZ88_25430) | 23516..25378 | - | 1863 | WP_000847106.1 | relaxosome-coupling protein TaxB | - |
| PYZ88_RS25480 (PYZ88_25435) | 25365..26393 | - | 1029 | WP_000017225.1 | Type IV secretion system protein VirB11 | VF |
| PYZ88_RS25485 (PYZ88_25440) | 26395..27513 | - | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| PYZ88_RS25490 (PYZ88_25445) | 27506..28414 | - | 909 | WP_001329500.1 | Type IV secretion system protein virB9 | VF |
| PYZ88_RS25495 (PYZ88_25450) | 28411..29097 | - | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| PYZ88_RS25500 (PYZ88_25455) | 29612..30691 | - | 1080 | WP_000007791.1 | hypothetical protein | VF |
| PYZ88_RS25505 (PYZ88_25460) | 30702..31418 | - | 717 | WP_021526218.1 | type IV secretion system protein | - |
| PYZ88_RS25510 (PYZ88_25465) | 31430..34177 | - | 2748 | WP_001694186.1 | Type IV secretion system protein virB4 | VF |
| PYZ88_RS25515 (PYZ88_25470) | 34196..34522 | - | 327 | WP_021526219.1 | Type IV secretion system protein virB2 | VF |
| PYZ88_RS25520 (PYZ88_25475) | 34536..35156 | - | 621 | WP_001694184.1 | Type IV secretion system protein virB1 | VF |
| PYZ88_RS25525 (PYZ88_25480) | 35520..35753 | - | 234 | WP_000121162.1 | EexN family lipoprotein | - |
| PYZ88_RS25530 (PYZ88_25485) | 35758..36024 | - | 267 | WP_000160396.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|