MGE detailed information
MGE type: Genomic_island MGE length: 14422 bp
Accession: NZ_CP119120 Location: 443305..457726 Organism: Escherichia coli strain GENOMIC22-004 Replicon: chromosome
Accession: NZ_CP119120 Location: 443305..457726 Organism: Escherichia coli strain GENOMIC22-004 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PYZ88_RS02040 (439712) | 439712..440431 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| PYZ88_RS02045 (440428) | 440428..442059 | - | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| PYZ88_RS02050 (442240) | 442240..442470 | + | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| PYZ88_RS02055 (442482) | 442482..442754 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| PYZ88_RS02060 (442981) | 442981..443277 | + | 297 | WP_001425728.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| PYZ88_RS02065 (443305) | 443305..443478 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| PYZ88_RS02070 (443597) | 443597..445114 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| PYZ88_RS02075 (445351) | 445351..446808 | - | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| PYZ88_RS02080 (446867) | 446867..449014 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| PYZ88_RS02085 (449094) | 449094..450428 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| PYZ88_RS02090 (450794) | 450794..452332 | - | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| PYZ88_RS02095 (453215) | 453215..453541 | - | 327 | WP_000779482.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PYZ88_RS02100 (453538) | 453538..453801 | - | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PYZ88_RS02105 (453873) | 453873..454739 | - | 867 | WP_001290180.1 | DUF4942 domain-containing protein | - |
| PYZ88_RS02110 (454832) | 454832..455029 | - | 198 | WP_000839238.1 | DUF957 domain-containing protein | - |
| PYZ88_RS02115 (455041) | 455041..455529 | - | 489 | WP_000777672.1 | DUF5983 family protein | - |
| PYZ88_RS02120 (455526) | 455526..455903 | - | 378 | WP_000854720.1 | TA system toxin CbtA family protein | Toxin Detail |
| PYZ88_RS02125 (455993) | 455993..456361 | - | 369 | WP_001285612.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PYZ88_RS02130 (456441) | 456441..456662 | - | 222 | WP_000692347.1 | DUF987 domain-containing protein | - |
| PYZ88_RS02135 (456749) | 456749..457225 | - | 477 | WP_001747787.1 | RadC family protein | - |
| PYZ88_RS02140 (457241) | 457241..457726 | - | 486 | WP_000849596.1 | antirestriction protein | - |
| PYZ88_RS02145 (457781) | 457781..458599 | - | 819 | WP_047938428.1 | DUF932 domain-containing protein | - |
| PYZ88_RS02150 (458699) | 458699..458932 | - | 234 | WP_024173997.1 | DUF905 family protein | - |
| PYZ88_RS02155 (459018) | 459018..459422 | + | 405 | WP_000839179.1 | transposase | - |
| PYZ88_RS02160 (459419) | 459419..459766 | + | 348 | WP_024173998.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| PYZ88_RS02165 (459815) | 459815..461353 | + | 1539 | WP_000099193.1 | IS66-like element ISEc22 family transposase | - |
| PYZ88_RS02170 (461473) | 461473..461928 | - | 456 | WP_000581493.1 | IrmA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|