MGE detailed information
MGE type: Genomic_island MGE length: 11675 bp
Accession: NZ_CP119120 Location: 4126614..4138288 Organism: Escherichia coli strain GENOMIC22-004 Replicon: chromosome
Accession: NZ_CP119120 Location: 4126614..4138288 Organism: Escherichia coli strain GENOMIC22-004 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PYZ88_RS20070 (4122939) | 4122939..4124147 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| PYZ88_RS20075 (4124173) | 4124173..4125504 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| PYZ88_RS20080 (4125526) | 4125526..4126515 | - | 990 | WP_142438601.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| PYZ88_RS20085 (4126614) | 4126614..4127552 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| PYZ88_RS20090 (4127867) | 4127867..4128085 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| PYZ88_RS20095 (4128341) | 4128341..4128880 | + | 540 | WP_000675746.1 | protein YhaB | - |
| PYZ88_RS20100 (4128902) | 4128902..4130089 | + | 1188 | WP_000484577.1 | YhaC family protein | - |
| PYZ88_RS20110 (4131112) | 4131112..4132257 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| PYZ88_RS20115 (4132354) | 4132354..4133244 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| PYZ88_RS20120 (4133274) | 4133274..4134044 | - | 771 | WP_001058214.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| PYZ88_RS20125 (4134060) | 4134060..4135394 | - | 1335 | WP_000599652.1 | galactarate/glucarate/glycerate transporter GarP | - |
| PYZ88_RS20130 (4135769) | 4135769..4137340 | + | 1572 | WP_001273761.1 | galactarate dehydratase | - |
| PYZ88_RS20135 (4137489) | 4137489..4137824 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| PYZ88_RS20140 (4137824) | 4137824..4138288 | + | 465 | WP_000347251.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| PYZ88_RS20145 (4138343) | 4138343..4139152 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| PYZ88_RS20150 (4139401) | 4139401..4140681 | + | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| PYZ88_RS20155 (4140704) | 4140704..4141177 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| PYZ88_RS20160 (4141188) | 4141188..4141967 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| PYZ88_RS20165 (4141957) | 4141957..4142835 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| PYZ88_RS20170 (4142853) | 4142853..4143287 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|