MGE detailed information
MGE type: Prophage MGE length: 40755 bp
Accession: NZ_CP118976 Location: 1045118..1085872 Organism: Staphylococcus succinus strain DSM 14617 Replicon: chromosome
Accession: NZ_CP118976 Location: 1045118..1085872 Organism: Staphylococcus succinus strain DSM 14617 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PYW31_RS04995 | 1040760..1041263 | - | 504 | WP_046837997.1 | hypothetical protein | - |
| PYW31_RS05000 | 1041524..1042558 | + | 1035 | WP_046837998.1 | uroporphyrinogen decarboxylase | - |
| PYW31_RS05005 | 1042649..1043572 | + | 924 | WP_046837999.1 | ferrochelatase | - |
| PYW31_RS05010 | 1043590..1044987 | + | 1398 | WP_046838000.1 | protoporphyrinogen oxidase | - |
| PYW31_RS05015 | 1045118..1045675 | + | 558 | WP_046838001.1 | alpha/beta hydrolase | - |
| PYW31_RS05060 | 1046921..1047985 | - | 1065 | WP_046836826.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PYW31_RS05065 | 1048046..1048552 | - | 507 | WP_046836825.1 | hypothetical protein | - |
| PYW31_RS05070 | 1048641..1049105 | - | 465 | WP_046836824.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| PYW31_RS05075 | 1049118..1049447 | - | 330 | WP_046836823.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| PYW31_RS05080 | 1049662..1049877 | + | 216 | WP_240621337.1 | helix-turn-helix transcriptional regulator | - |
| PYW31_RS05085 | 1049919..1050800 | + | 882 | WP_046836821.1 | HNH endonuclease | - |
| PYW31_RS05090 | 1050850..1051065 | + | 216 | WP_046836820.1 | DUF771 domain-containing protein | - |
| PYW31_RS05095 | 1051079..1051252 | + | 174 | WP_156168127.1 | hypothetical protein | - |
| PYW31_RS05100 | 1051316..1051537 | + | 222 | WP_046836846.1 | DUF2483 family protein | - |
| PYW31_RS05105 | 1051530..1052144 | + | 615 | WP_046836819.1 | DUF1071 domain-containing protein | - |
| PYW31_RS05110 | 1052147..1052560 | + | 414 | WP_046836818.1 | single-stranded DNA-binding protein | - |
| PYW31_RS05115 | 1052573..1053241 | + | 669 | WP_046836817.1 | putative HNHc nuclease | - |
| PYW31_RS05120 | 1053238..1053477 | + | 240 | WP_053042472.1 | helix-turn-helix transcriptional regulator | - |
| PYW31_RS05125 | 1053479..1054261 | + | 783 | WP_046836816.1 | phage replisome organizer N-terminal domain-containing protein | - |
| PYW31_RS05130 | 1054273..1055058 | + | 786 | WP_046836815.1 | ATP-binding protein | - |
| PYW31_RS05135 | 1055226..1055438 | + | 213 | WP_046836814.1 | hypothetical protein | - |
| PYW31_RS05140 | 1055453..1055857 | + | 405 | WP_046836813.1 | DUF1064 domain-containing protein | - |
| PYW31_RS05145 | 1055854..1056045 | + | 192 | WP_046836812.1 | hypothetical protein | - |
| PYW31_RS05150 | 1056045..1056425 | + | 381 | WP_046836811.1 | hypothetical protein | - |
| PYW31_RS05155 | 1056801..1057019 | + | 219 | Protein_974 | DUF3310 domain-containing protein | - |
| PYW31_RS05160 | 1057020..1057325 | + | 306 | WP_046836810.1 | DUF1140 family protein | - |
| PYW31_RS05165 | 1057529..1057936 | + | 408 | WP_046836808.1 | YopX family protein | - |
| PYW31_RS05170 | 1057943..1058503 | + | 561 | WP_046836807.1 | hypothetical protein | - |
| PYW31_RS05175 | 1058504..1058737 | + | 234 | WP_046836806.1 | hypothetical protein | - |
| PYW31_RS05180 | 1058738..1058935 | + | 198 | WP_046836805.1 | hypothetical protein | - |
| PYW31_RS05185 | 1058932..1059243 | + | 312 | WP_046836804.1 | MazG-like family protein | - |
| PYW31_RS05190 | 1059317..1059649 | - | 333 | WP_046836803.1 | DUF4870 domain-containing protein | - |
| PYW31_RS05195 | 1059757..1059882 | + | 126 | Protein_982 | DUF1381 domain-containing protein | - |
| PYW31_RS05200 | 1060034..1060171 | + | 138 | WP_103356933.1 | transcriptional regulator | - |
| PYW31_RS05205 | 1060171..1060341 | + | 171 | WP_142382633.1 | DUF1514 domain-containing protein | - |
| PYW31_RS05210 | 1060372..1060788 | - | 417 | WP_156168126.1 | hypothetical protein | - |
| PYW31_RS05215 | 1060940..1061335 | + | 396 | WP_046836800.1 | hypothetical protein | - |
| PYW31_RS05220 | 1061810..1062148 | + | 339 | WP_235602286.1 | HNH endonuclease | - |
| PYW31_RS05225 | 1062268..1062738 | + | 471 | WP_046836798.1 | phage terminase small subunit P27 family | - |
| PYW31_RS05230 | 1062731..1064479 | + | 1749 | WP_046836797.1 | terminase large subunit | - |
| PYW31_RS05235 | 1064492..1064671 | + | 180 | WP_046836796.1 | hypothetical protein | - |
| PYW31_RS05240 | 1064668..1065912 | + | 1245 | WP_063410296.1 | phage portal protein | - |
| PYW31_RS05245 | 1065893..1066450 | + | 558 | WP_046836795.1 | HK97 family phage prohead protease | - |
| PYW31_RS05250 | 1066499..1067821 | + | 1323 | WP_046836794.1 | phage major capsid protein | - |
| PYW31_RS05255 | 1067836..1068003 | + | 168 | WP_169746236.1 | hypothetical protein | - |
| PYW31_RS05260 | 1068013..1068342 | + | 330 | WP_046836793.1 | head-tail connector protein | - |
| PYW31_RS05265 | 1068312..1068635 | + | 324 | WP_046836792.1 | phage head closure protein | - |
| PYW31_RS05270 | 1068632..1069054 | + | 423 | WP_046836791.1 | hypothetical protein | - |
| PYW31_RS05275 | 1069047..1069460 | + | 414 | WP_046836790.1 | hypothetical protein | - |
| PYW31_RS05280 | 1069464..1070075 | + | 612 | WP_046836789.1 | hypothetical protein | - |
| PYW31_RS05285 | 1070148..1070678 | + | 531 | WP_046836788.1 | hypothetical protein | - |
| PYW31_RS05290 | 1070877..1075955 | + | 5079 | WP_053042471.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| PYW31_RS05295 | 1075955..1076782 | + | 828 | WP_046836787.1 | phage tail family protein | - |
| PYW31_RS05300 | 1076792..1078378 | + | 1587 | WP_082104710.1 | prophage endopeptidase tail family protein | - |
| PYW31_RS05305 | 1078371..1078850 | + | 480 | WP_046836785.1 | hypothetical protein | - |
| PYW31_RS05310 | 1078854..1080872 | + | 2019 | WP_046836784.1 | hypothetical protein | - |
| PYW31_RS05315 | 1080888..1082033 | + | 1146 | WP_053042470.1 | phage baseplate upper protein | - |
| PYW31_RS05320 | 1082036..1082356 | + | 321 | WP_046836783.1 | hypothetical protein | - |
| PYW31_RS05325 | 1082358..1082507 | + | 150 | WP_082104709.1 | XkdX family protein | - |
| PYW31_RS05330 | 1082633..1082917 | + | 285 | WP_053042473.1 | DUF2951 family protein | - |
| PYW31_RS05335 | 1083069..1083383 | + | 315 | WP_082104712.1 | phage holin | - |
| PYW31_RS05340 | 1083380..1084792 | + | 1413 | WP_046836782.1 | SH3 domain-containing protein | - |
| PYW31_RS05345 | 1085045..1085455 | + | 411 | WP_046836781.1 | YolD-like family protein | - |
| PYW31_RS05350 | 1085540..1085872 | + | 333 | WP_240621338.1 | hypothetical protein | - |
| PYW31_RS05355 | 1085987..1086112 | + | 126 | WP_256092584.1 | hypothetical protein | - |
| PYW31_RS05360 | 1086270..1086452 | + | 183 | WP_046836780.1 | XRE family transcriptional regulator | - |
| PYW31_RS05365 | 1086486..1087298 | + | 813 | WP_046836779.1 | hypothetical protein | - |
| PYW31_RS05370 | 1087946..1088314 | + | 369 | WP_046836778.1 | YxeA family protein | - |
| PYW31_RS05375 | 1089178..1089840 | + | 663 | WP_046836777.1 | phosphopantothenoylcysteine decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|