MGE detailed information
MGE type: Conjugative plasmid MGE length: 67839 bp
Accession: NZ_CP118928 Location: 1..67839 Organism: Citrobacter koseri strain L2395 Replicon: plasmid pL2395_NDM
Accession: NZ_CP118928 Location: 1..67839 Organism: Citrobacter koseri strain L2395 Replicon: plasmid pL2395_NDM
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PX343_RS22745 (1) | 1..720 | + | 720 | WP_001749982.1 | replication initiation protein | - |
| PX343_RS22750 (1896) | 1896..2450 | - | 555 | Protein_1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| PX343_RS22755 (2500) | 2500..3204 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PX343_RS22760 (3269) | 3269..3448 | - | 180 | Protein_3 | helix-turn-helix domain-containing protein | - |
| PX343_RS22765 (3874) | 3874..4002 | + | 129 | WP_002210551.1 | hypothetical protein | - |
| PX343_RS22770 (4176) | 4176..4709 | - | 534 | WP_000792636.1 | hypothetical protein | VF |
| PX343_RS22775 (4709) | 4709..5704 | - | 996 | WP_000128596.1 | Type IV secretion system protein VirB11 | VF |
| PX343_RS22780 (5746) | 5746..6906 | - | 1161 | WP_000101710.1 | Protein virB10 | VF |
| PX343_RS22785 (6906) | 6906..7790 | - | 885 | WP_000735066.1 | Type IV secretion system protein virB9 | VF |
| PX343_RS22790 (7801) | 7801..8499 | - | 699 | WP_000646594.1 | Type IV secretion system protein virB8 | VF |
| PX343_RS22795 (8718) | 8718..9758 | - | 1041 | WP_001749958.1 | type IV secretion system protein | - |
| PX343_RS22800 (9774) | 9774..10001 | - | 228 | WP_001749959.1 | IncN-type entry exclusion lipoprotein EexN | - |
| PX343_RS22805 (10009) | 10009..10722 | - | 714 | WP_001749960.1 | Type IV secretion system protein virB5 | VF |
| PX343_RS22810 (10740) | 10740..13208 | - | 2469 | WP_224743086.1 | Type IV secretion system protein virB4 | VF |
| PX343_RS22815 (13340) | 13340..13657 | - | 318 | WP_000496058.1 | hypothetical protein | VF |
| PX343_RS22820 (13707) | 13707..14000 | - | 294 | WP_001749962.1 | hypothetical protein | - |
| PX343_RS22825 (14010) | 14010..14291 | - | 282 | WP_000440698.1 | transcriptional repressor KorA | - |
| PX343_RS22830 (14300) | 14300..15034 | - | 735 | WP_001749963.1 | hypothetical protein | VF |
| PX343_RS22835 (15077) | 15077..15448 | + | 372 | WP_011867773.1 | H-NS family nucleoid-associated regulatory protein | - |
| PX343_RS22840 (15464) | 15464..15808 | + | 345 | WP_001749964.1 | hypothetical protein | - |
| PX343_RS22845 (15805) | 15805..16119 | + | 315 | WP_001749965.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| PX343_RS22850 (16155) | 16155..16466 | + | 312 | WP_001452736.1 | hypothetical protein | - |
| PX343_RS22855 (16516) | 16516..17085 | + | 570 | WP_275055905.1 | restriction endonuclease | - |
| PX343_RS22865 (18393) | 18393..18599 | + | 207 | WP_001749967.1 | hypothetical protein | - |
| PX343_RS22870 (18610) | 18610..18882 | - | 273 | Protein_25 | IS1 family transposase IS1X2 | Transposase |
| PX343_RS22875 (18981) | 18981..20414 | + | 1434 | WP_001288432.1 | DNA cytosine methyltransferase | - |
| PX343_RS22880 (20448) | 20448..21662 | - | 1215 | WP_004098817.1 | type II site-specific deoxyribonuclease | - |
| PX343_RS22885 (21718) | 21718..21783 | + | 66 | Protein_28 | EAL domain-containing protein | - |
| PX343_RS22890 (21923) | 21923..22687 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| PX343_RS22895 (22805) | 22805..22870 | - | 66 | Protein_30 | EAL domain-containing protein | - |
| PX343_RS22900 (22944) | 22944..23096 | - | 153 | Protein_31 | plasmid mobilization relaxosome protein MobC | - |
| PX343_RS22905 (23317) | 23317..23790 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| PX343_RS22910 (23946) | 23946..24959 | + | 1014 | WP_271051338.1 | IS91 family transposase ISAzo26 | Transposase |
| PX343_RS22915 (25441) | 25441..26145 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PX343_RS22920 (26211) | 26211..26756 | + | 546 | Protein_35 | Tn3 family transposase TnpA_Tn3 | Transposase |
| PX343_RS22925 (26792) | 26792..27207 | - | 416 | Protein_36 | IS1 family transposase IS1R | Transposase |
| PX343_RS22930 (27456) | 27456..27857 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| PX343_RS22935 (27790) | 27790..28047 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| PX343_RS22940 (28140) | 28140..28793 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| PX343_RS22945 (29732) | 29732..30589 | - | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| PX343_RS22950 (30582) | 30582..30656 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| PX343_RS22955 (30901) | 30901..31149 | - | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| PX343_RS22960 (31433) | 31433..31582 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (31627) | 31627..31686 | + | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (31627) | 31627..31686 | + | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (31627) | 31627..31686 | + | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (31627) | 31627..31686 | + | 60 | NuclAT_0 | - | Antitoxin Detail |
| PX343_RS22965 (32281) | 32281..32880 | - | 600 | WP_032083981.1 | PIN domain-containing protein | - |
| PX343_RS22970 (33266) | 33266..33466 | - | 201 | WP_015059022.1 | hypothetical protein | - |
| PX343_RS22975 (33598) | 33598..34158 | - | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| PX343_RS22980 (34213) | 34213..34959 | - | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| PX343_RS22985 (34979) | 34979..35116 | - | 138 | WP_191002463.1 | hypothetical protein | - |
| PX343_RS22990 (35204) | 35204..35908 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PX343_RS22995 (35962) | 35962..36593 | - | 632 | Protein_50 | transposase | - |
| PX343_RS23000 (36988) | 36988..37644 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| PX343_RS23005 (37963) | 37963..38577 | - | 615 | WP_014839983.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| PX343_RS23010 (38739) | 38739..38921 | + | 183 | Protein_53 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| PX343_RS23015 (39057) | 39057..39602 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| PX343_RS23020 (39739) | 39739..40311 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| PX343_RS23025 (40348) | 40348..41739 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| PX343_RS23030 (41912) | 41912..42241 | + | 330 | WP_004201171.1 | divalent-cation tolerance protein CutA | - |
| PX343_RS23035 (42246) | 42246..42620 | + | 375 | Protein_58 | protein-disulfide reductase DsbD family protein | - |
| PX343_RS23040 (42720) | 42720..43277 | + | 558 | Protein_59 | twin-arginine translocation (TAT) pathway signal sequence domain protein | - |
| PX343_RS23045 (43288) | 43288..43926 | - | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| PX343_RS23050 (43931) | 43931..44296 | - | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| PX343_RS23055 (44300) | 44300..45112 | - | 813 | WP_004201164.1 | Metallo-beta-lactamase type 2 | ARG |
| PX343_RS23060 (45213) | 45213..45464 | - | 252 | Protein_63 | IS30 family transposase | - |
| PX343_RS23065 (45497) | 45497..46888 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| PX343_RS23070 (46925) | 46925..47497 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| PX343_RS23075 (47634) | 47634..48179 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| PX343_RS23080 (48305) | 48305..48400 | - | 96 | Protein_67 | IS6 family transposase IS15DI | Transposase |
| PX343_RS23085 (48466) | 48466..48963 | + | 498 | Protein_68 | Tn3 family transposase ISEc63 | Transposase |
| PX343_RS23090 (48973) | 48973..49338 | - | 366 | WP_012561167.1 | hypothetical protein | - |
| PX343_RS23095 (49338) | 49338..52574 | - | 3237 | WP_012561166.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| PX343_RS23100 (52574) | 52574..54103 | - | 1530 | WP_021740568.1 | type IV secretion system DNA-binding domain-containing protein | - |
| PX343_RS23105 (54105) | 54105..54521 | - | 417 | WP_001749975.1 | hypothetical protein | - |
| PX343_RS23110 (55012) | 55012..55431 | + | 420 | WP_001749974.1 | plasmid stabilization protein StbA | - |
| PX343_RS23115 (55440) | 55440..56156 | + | 717 | WP_001749973.1 | StbB family protein | - |
| PX343_RS23120 (56158) | 56158..56526 | + | 369 | WP_000414913.1 | plasmid stabilization protein StbC | - |
| PX343_RS23125 (56708) | 56708..57052 | + | 345 | WP_000999874.1 | hypothetical protein | - |
| PX343_RS23130 (57163) | 57163..57483 | - | 321 | WP_001749971.1 | protein CcgAII | - |
| PX343_RS23135 (57538) | 57538..57717 | - | 180 | WP_000214483.1 | protein CcgAI | - |
| PX343_RS23140 (58444) | 58444..58953 | - | 510 | WP_000129958.1 | antirestriction protein ArdA | - |
| PX343_RS23145 (60306) | 60306..60638 | - | 333 | WP_012561126.1 | hypothetical protein | - |
| PX343_RS23150 (60847) | 60847..61131 | - | 285 | WP_001750002.1 | protein CcgC | - |
| PX343_RS23155 (61200) | 61200..61559 | - | 360 | WP_001750003.1 | hypothetical protein | - |
| PX343_RS23160 (61556) | 61556..61852 | - | 297 | WP_000545925.1 | protein CcgD | - |
| PX343_RS23165 (62738) | 62738..62977 | - | 240 | WP_000932975.1 | hypothetical protein | - |
| PX343_RS23170 (62987) | 62987..63391 | - | 405 | WP_000881513.1 | antirestriction protein ArdAB regulator ArdR | - |
| PX343_RS23175 (63449) | 63449..63874 | - | 426 | WP_000447669.1 | antirestriction protein ArdB | - |
| PX343_RS23180 (64289) | 64289..64729 | + | 441 | WP_000861760.1 | translesion error-prone DNA polymerase V autoproteolytic subunit MucA | - |
| PX343_RS23185 (64717) | 64717..65982 | + | 1266 | WP_001749980.1 | translesion error-prone DNA polymerase V subunit MucB | - |
| PX343_RS23190 (66133) | 66133..66924 | + | 792 | WP_001452808.1 | SprT-like domain-containing protein | - |
| PX343_RS23195 (66939) | 66939..67280 | - | 342 | WP_000057569.1 | antirestriction protein ArdAB regulator ArdK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|