MGE detailed information
MGE type: Prophage MGE length: 55542 bp
Accession: NZ_CP118856 Location: 1964415..2019956 Organism: Mammaliicoccus lentus strain 7046 Replicon: chromosome
Accession: NZ_CP118856 Location: 1964415..2019956 Organism: Mammaliicoccus lentus strain 7046 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PYH59_RS09785 (PYH59_09785) | 1960144..1960587 | - | 444 | WP_070044943.1 | DUF86 domain-containing protein | - |
| PYH59_RS09790 (PYH59_09790) | 1960695..1960964 | + | 270 | WP_016999766.1 | DUF3055 domain-containing protein | - |
| PYH59_RS09795 (PYH59_09795) | 1961700..1962065 | - | 366 | Protein_1899 | YutD family protein | - |
| PYH59_RS09800 (PYH59_09800) | 1962078..1963037 | - | 960 | WP_081501338.1 | lipoyl synthase | - |
| PYH59_RS09805 (PYH59_09805) | 1963077..1964402 | - | 1326 | WP_064211453.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase | - |
| PYH59_RS09810 (PYH59_09810) | 1964415..1965236 | - | 822 | WP_282821218.1 | sulfite exporter TauE/SafE family protein | - |
| PYH59_RS09815 (PYH59_09815) | 1965247..1966095 | - | 849 | WP_016999761.1 | DUF72 domain-containing protein | - |
| PYH59_RS09820 (PYH59_09820) | 1966258..1966626 | - | 369 | WP_016999760.1 | YxeA family protein | - |
| PYH59_RS09825 (PYH59_09825) | 1966902..1968155 | - | 1254 | WP_016999759.1 | hypothetical protein | VF |
| PYH59_RS09830 (PYH59_09830) | 1968175..1968495 | - | 321 | WP_016999758.1 | phage holin | - |
| PYH59_RS09835 (PYH59_09835) | 1968638..1968967 | + | 330 | WP_026023660.1 | helix-turn-helix transcriptional regulator | - |
| PYH59_RS09840 (PYH59_09840) | 1969005..1969469 | + | 465 | WP_016999757.1 | ImmA/IrrE family metallo-endopeptidase | - |
| PYH59_RS09845 (PYH59_09845) | 1969548..1970696 | - | 1149 | WP_070044942.1 | galactonate dehydratase | - |
| PYH59_RS09850 (PYH59_09850) | 1970698..1971342 | - | 645 | WP_016999755.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PYH59_RS09855 (PYH59_09855) | 1971355..1972308 | - | 954 | WP_016999754.1 | sugar kinase | - |
| PYH59_RS09860 (PYH59_09860) | 1972330..1973115 | - | 786 | WP_016999753.1 | Dihydroanticapsin 7-dehydrogenase | VF |
| PYH59_RS09865 (PYH59_09865) | 1973134..1974354 | - | 1221 | WP_070044941.1 | ROK family transcriptional regulator | - |
| PYH59_RS09870 (PYH59_09870) | 1974554..1975921 | + | 1368 | WP_016999751.1 | sugar porter family MFS transporter | - |
| PYH59_RS09875 (PYH59_09875) | 1976702..1977112 | + | 411 | WP_282821221.1 | YolD-like family protein | - |
| PYH59_RS09880 (PYH59_09880) | 1977139..1977558 | + | 420 | WP_282821222.1 | hypothetical protein | - |
| PYH59_RS09885 (PYH59_09885) | 1977577..1977909 | - | 333 | WP_282822276.1 | hypothetical protein | - |
| PYH59_RS09890 (PYH59_09890) | 1978358..1979770 | - | 1413 | WP_282821223.1 | SH3 domain-containing protein | - |
| PYH59_RS09895 (PYH59_09895) | 1979815..1980108 | - | 294 | WP_282821224.1 | phage holin | - |
| PYH59_RS09900 (PYH59_09900) | 1980105..1980530 | - | 426 | WP_282821225.1 | hypothetical protein | - |
| PYH59_RS09905 (PYH59_09905) | 1980541..1980864 | - | 324 | WP_282821226.1 | hypothetical protein | - |
| PYH59_RS09910 (PYH59_09910) | 1980935..1981432 | - | 498 | WP_282821227.1 | XkdX family protein | - |
| PYH59_RS09915 (PYH59_09915) | 1981435..1983090 | - | 1656 | WP_282821228.1 | BppU family phage baseplate upper protein | - |
| PYH59_RS09920 (PYH59_09920) | 1983102..1984811 | - | 1710 | WP_282821229.1 | phosphodiester glycosidase family protein | - |
| PYH59_RS09925 (PYH59_09925) | 1984824..1985342 | - | 519 | WP_084756749.1 | hypothetical protein | - |
| PYH59_RS09930 (PYH59_09930) | 1985335..1986888 | - | 1554 | WP_282821230.1 | prophage endopeptidase tail family protein | - |
| PYH59_RS09935 (PYH59_09935) | 1986899..1987732 | - | 834 | WP_282821232.1 | phage tail family protein | - |
| PYH59_RS09940 (PYH59_09940) | 1987729..1992501 | - | 4773 | WP_282821234.1 | tape measure protein | - |
| PYH59_RS09945 (PYH59_09945) | 1992534..1993043 | - | 510 | WP_282822277.1 | hypothetical protein | - |
| PYH59_RS09950 (PYH59_09950) | 1993059..1993418 | - | 360 | WP_282821235.1 | hypothetical protein | - |
| PYH59_RS09955 (PYH59_09955) | 1993495..1993986 | - | 492 | WP_282821236.1 | Ig-like domain-containing protein | - |
| PYH59_RS09960 (PYH59_09960) | 1993986..1994192 | - | 207 | WP_152291804.1 | hypothetical protein | - |
| PYH59_RS09965 (PYH59_09965) | 1994281..1994877 | - | 597 | WP_282821237.1 | phage tail protein | - |
| PYH59_RS09970 (PYH59_09970) | 1994890..1995294 | - | 405 | WP_282821238.1 | hypothetical protein | - |
| PYH59_RS09975 (PYH59_09975) | 1995291..1995683 | - | 393 | WP_204206423.1 | hypothetical protein | - |
| PYH59_RS09980 (PYH59_09980) | 1995674..1996006 | - | 333 | WP_241959455.1 | hypothetical protein | - |
| PYH59_RS09985 (PYH59_09985) | 1995990..1996289 | - | 300 | WP_096791166.1 | head-tail connector protein | - |
| PYH59_RS09990 (PYH59_09990) | 1996363..1997580 | - | 1218 | WP_282821240.1 | phage major capsid protein | - |
| PYH59_RS09995 (PYH59_09995) | 1997692..1998279 | - | 588 | WP_096791164.1 | HK97 family phage prohead protease | - |
| PYH59_RS10000 (PYH59_10000) | 1998272..1999525 | - | 1254 | WP_282821242.1 | phage portal protein | - |
| PYH59_RS10005 (PYH59_10005) | 1999548..1999754 | - | 207 | WP_282821244.1 | hypothetical protein | - |
| PYH59_RS10010 (PYH59_10010) | 1999765..2001465 | - | 1701 | WP_282821245.1 | terminase large subunit | - |
| PYH59_RS10015 (PYH59_10015) | 2001462..2001920 | - | 459 | WP_282821246.1 | phage terminase small subunit P27 family | - |
| PYH59_RS10020 (PYH59_10020) | 2002160..2002594 | - | 435 | WP_282821247.1 | HNH endonuclease | - |
| PYH59_RS10025 (PYH59_10025) | 2002605..2002766 | - | 162 | WP_158259759.1 | hypothetical protein | - |
| PYH59_RS10030 (PYH59_10030) | 2002969..2003427 | - | 459 | WP_152291811.1 | hypothetical protein | - |
| PYH59_RS10035 (PYH59_10035) | 2003446..2003655 | - | 210 | WP_282821250.1 | hypothetical protein | - |
| PYH59_RS10040 (PYH59_10040) | 2003652..2004116 | - | 465 | WP_282821253.1 | hypothetical protein | - |
| PYH59_RS10045 (PYH59_10045) | 2004118..2004309 | - | 192 | WP_282821254.1 | hypothetical protein | - |
| PYH59_RS10050 (PYH59_10050) | 2004299..2004613 | - | 315 | WP_282821255.1 | hypothetical protein | - |
| PYH59_RS10055 (PYH59_10055) | 2004683..2004868 | - | 186 | WP_282821257.1 | hypothetical protein | - |
| PYH59_RS10060 (PYH59_10060) | 2004869..2005123 | - | 255 | WP_282821259.1 | hypothetical protein | - |
| PYH59_RS10065 (PYH59_10065) | 2005120..2005320 | - | 201 | WP_282821261.1 | hypothetical protein | - |
| PYH59_RS10070 (PYH59_10070) | 2005317..2005535 | - | 219 | WP_282821263.1 | hypothetical protein | - |
| PYH59_RS10075 (PYH59_10075) | 2005585..2006346 | - | 762 | WP_282821264.1 | site-specific DNA-methyltransferase | - |
| PYH59_RS10080 (PYH59_10080) | 2006558..2006860 | - | 303 | WP_282822274.1 | MazG-like family protein | - |
| PYH59_RS10085 (PYH59_10085) | 2007017..2007274 | - | 258 | WP_282821266.1 | hypothetical protein | - |
| PYH59_RS10090 (PYH59_10090) | 2007264..2007494 | - | 231 | WP_282821268.1 | hypothetical protein | - |
| PYH59_RS10095 (PYH59_10095) | 2007496..2007786 | - | 291 | WP_282821271.1 | hypothetical protein | - |
| PYH59_RS10100 (PYH59_10100) | 2007786..2008172 | - | 387 | WP_282821273.1 | hypothetical protein | - |
| PYH59_RS10105 (PYH59_10105) | 2008185..2008436 | - | 252 | WP_282821275.1 | hypothetical protein | - |
| PYH59_RS10110 (PYH59_10110) | 2008433..2008663 | - | 231 | WP_282821277.1 | hypothetical protein | - |
| PYH59_RS10115 (PYH59_10115) | 2008666..2008992 | - | 327 | WP_204177248.1 | SA1788 family PVL leukocidin-associated protein | - |
| PYH59_RS10120 (PYH59_10120) | 2008989..2009177 | - | 189 | WP_243476638.1 | hypothetical protein | - |
| PYH59_RS10125 (PYH59_10125) | 2009347..2010141 | - | 795 | WP_282821283.1 | IS21 family transposase IS712 | Transposase |
| PYH59_RS10130 (PYH59_10130) | 2010151..2010885 | - | 735 | WP_262648094.1 | DnaD domain protein | - |
| PYH59_RS10135 (PYH59_10135) | 2010872..2011549 | - | 678 | WP_282821284.1 | putative HNHc nuclease | - |
| PYH59_RS10140 (PYH59_10140) | 2011569..2012073 | - | 505 | Protein_1968 | single-stranded DNA-binding protein | - |
| PYH59_RS10145 (PYH59_10145) | 2012070..2012729 | - | 660 | WP_096791149.1 | ERF family protein | - |
| PYH59_RS10150 (PYH59_10150) | 2012730..2013215 | - | 486 | WP_107602488.1 | siphovirus Gp157 family protein | - |
| PYH59_RS10155 (PYH59_10155) | 2013208..2013477 | - | 270 | WP_107610866.1 | hypothetical protein | - |
| PYH59_RS10160 (PYH59_10160) | 2013480..2013740 | - | 261 | WP_204177273.1 | hypothetical protein | - |
| PYH59_RS10165 (PYH59_10165) | 2013830..2014105 | - | 276 | WP_282821291.1 | hypothetical protein | - |
| PYH59_RS10170 (PYH59_10170) | 2014106..2014345 | - | 240 | WP_282821292.1 | hypothetical protein | - |
| PYH59_RS10175 (PYH59_10175) | 2014346..2014522 | - | 177 | WP_282821294.1 | hypothetical protein | - |
| PYH59_RS10180 (PYH59_10180) | 2014519..2014740 | - | 222 | WP_282821295.1 | hypothetical protein | - |
| PYH59_RS10185 (PYH59_10185) | 2014753..2015529 | - | 777 | WP_243476629.1 | phage antirepressor | - |
| PYH59_RS10190 (PYH59_10190) | 2015541..2015771 | - | 231 | WP_204179321.1 | helix-turn-helix transcriptional regulator | - |
| PYH59_RS10195 (PYH59_10195) | 2015924..2016241 | + | 318 | WP_058591554.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| PYH59_RS10200 (PYH59_10200) | 2016253..2016717 | + | 465 | WP_204179283.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| PYH59_RS10205 (PYH59_10205) | 2016731..2017381 | + | 651 | WP_282821300.1 | hypothetical protein | - |
| PYH59_RS10210 (PYH59_10210) | 2017441..2018484 | + | 1044 | WP_282821302.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PYH59_RS10215 (PYH59_10215) | 2018559..2019956 | - | 1398 | WP_017000941.1 | Fe-S cluster assembly protein SufB | - |
| PYH59_RS10220 (PYH59_10220) | 2020003..2020443 | - | 441 | WP_064211459.1 | SUF system NifU family Fe-S cluster assembly protein | - |
| PYH59_RS10225 (PYH59_10225) | 2020433..2021698 | - | 1266 | WP_174700894.1 | cysteine desulfurase | - |
| PYH59_RS10230 (PYH59_10230) | 2021701..2023017 | - | 1317 | WP_017000938.1 | Fe-S cluster assembly protein SufD | - |
| PYH59_RS10235 (PYH59_10235) | 2023053..2023832 | - | 780 | WP_017000937.1 | Fe-S cluster assembly ATPase SufC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|