MGE detailed information
MGE type: Prophage MGE length: 43240 bp
Accession: NZ_CP118814 Location: 1947055..1990294 Organism: Staphylococcus epidermidis strain 7060 Replicon: chromosome
Accession: NZ_CP118814 Location: 1947055..1990294 Organism: Staphylococcus epidermidis strain 7060 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PYH74_RS09140 (PYH74_09140) | 1942732..1943493 | - | 762 | WP_001831944.1 | Fe-S cluster assembly ATPase SufC | - |
| PYH74_RS09145 (PYH74_09145) | 1943815..1944674 | + | 860 | Protein_1767 | DUF368 domain-containing protein | - |
| PYH74_RS09150 (PYH74_09150) | 1944740..1944931 | - | 192 | WP_001831967.1 | CsbD family protein | - |
| PYH74_RS09155 (PYH74_09155) | 1945106..1945264 | + | 159 | WP_001831893.1 | hypothetical protein | - |
| PYH74_RS09160 (PYH74_09160) | 1945534..1946346 | - | 813 | WP_002438990.1 | MetQ/NlpA family ABC transporter substrate-binding protein | - |
| PYH74_RS09165 (PYH74_09165) | 1946367..1947062 | - | 696 | WP_002497561.1 | methionine ABC transporter permease | - |
| PYH74_RS09170 (PYH74_09170) | 1947055..1948080 | - | 1026 | WP_001831992.1 | Methionine import ATP-binding protein MetN 2 | VF |
| PYH74_RS09175 (PYH74_09175) | 1948333..1948629 | - | 297 | WP_001831936.1 | thioredoxin family protein | - |
| PYH74_RS09180 (PYH74_09180) | 1948622..1949008 | - | 387 | WP_001831968.1 | toprim domain-containing protein | - |
| PYH74_RS09185 (PYH74_09185) | 1949268..1949648 | - | 381 | WP_002438979.1 | glycine cleavage system protein GcvH | - |
| PYH74_RS09190 (PYH74_09190) | 1949822..1950175 | - | 354 | WP_001831965.1 | arsenate reductase family protein | - |
| PYH74_RS09195 (PYH74_09195) | 1950318..1950641 | + | 324 | WP_001831907.1 | thioredoxin family protein | - |
| PYH74_RS09200 (PYH74_09200) | 1950824..1951366 | - | 543 | WP_001831981.1 | nitroreductase | - |
| PYH74_RS09205 (PYH74_09205) | 1951447..1952163 | - | 717 | WP_001831974.1 | type I 3-dehydroquinate dehydratase | - |
| PYH74_RS09210 (PYH74_09210) | 1952324..1952746 | + | 423 | WP_002457221.1 | organic hydroperoxide resistance protein | - |
| PYH74_RS09215 (PYH74_09215) | 1952930..1953067 | - | 138 | WP_162161215.1 | IS1182 family transposase IS1272 | Transposase |
| PYH74_RS09220 (PYH74_09220) | 1953097..1953284 | - | 188 | Protein_1782 | hypothetical protein | - |
| PYH74_RS09225 (PYH74_09225) | 1953671..1954171 | + | 501 | WP_241526397.1 | GNAT family N-acetyltransferase | - |
| PYH74_RS09230 (PYH74_09230) | 1954442..1955029 | - | 588 | WP_001829615.1 | histidine phosphatase family protein | - |
| PYH74_RS09235 (PYH74_09235) | 1955241..1955477 | + | 237 | WP_002457224.1 | hypothetical protein | - |
| PYH74_RS09240 (PYH74_09240) | 1955469..1955672 | - | 204 | WP_002438966.1 | sterile alpha motif-like domain-containing protein | - |
| PYH74_RS09245 (PYH74_09245) | 1956081..1956338 | + | 258 | WP_002438963.1 | hypothetical protein | Antitoxin Detail |
| PYH74_RS09250 (PYH74_09250) | 1956363..1956551 | + | 189 | WP_001829569.1 | hypothetical protein | Toxin Detail |
| PYH74_RS09255 (PYH74_09255) | 1956741..1957294 | + | 554 | Protein_1789 | hypothetical protein | - |
| PYH74_RS09260 (PYH74_09260) | 1957354..1957587 | - | 234 | WP_001829664.1 | hypothetical protein | - |
| PYH74_RS09265 (PYH74_09265) | 1957871..1958617 | + | 747 | WP_002438959.1 | poly-gamma-glutamate hydrolase family protein | - |
| PYH74_RS09270 (PYH74_09270) | 1958716..1959000 | + | 285 | WP_001829635.1 | hypothetical protein | - |
| PYH74_RS09275 (PYH74_09275) | 1959024..1959248 | + | 225 | WP_001829613.1 | hypothetical protein | - |
| PYH74_RS09280 (PYH74_09280) | 1959869..1960069 | - | 201 | WP_001829681.1 | cold-shock protein | - |
| PYH74_RS09285 (PYH74_09285) | 1961435..1962376 | - | 942 | WP_001829688.1 | cation diffusion facilitator family transporter | - |
| PYH74_RS09290 (PYH74_09290) | 1962663..1963166 | + | 504 | WP_002438954.1 | DUF1440 domain-containing protein | - |
| PYH74_RS09295 (PYH74_09295) | 1964659..1965075 | + | 417 | WP_002468671.1 | VOC family protein | - |
| PYH74_RS09300 (PYH74_09300) | 1965295..1965639 | - | 345 | WP_001832602.1 | DUF4260 domain-containing protein | - |
| PYH74_RS09305 (PYH74_09305) | 1965865..1967172 | + | 1308 | WP_001832616.1 | potassium transporter TrkG | - |
| PYH74_RS09310 (PYH74_09310) | 1967785..1968018 | + | 234 | WP_001829658.1 | hypothetical protein | - |
| PYH74_RS09315 (PYH74_09315) | 1968276..1968446 | - | 171 | WP_001829642.1 | hypothetical protein | - |
| PYH74_RS09320 (PYH74_09320) | 1969181..1969723 | + | 543 | WP_001832592.1 | hypothetical protein | - |
| PYH74_RS09325 (PYH74_09325) | 1969867..1970046 | - | 180 | WP_001829655.1 | hypothetical protein | - |
| PYH74_RS09330 (PYH74_09330) | 1970197..1970643 | + | 447 | WP_002497560.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| PYH74_RS09335 (PYH74_09335) | 1970656..1971330 | + | 675 | WP_001829583.1 | hypothetical protein | - |
| PYH74_RS09340 (PYH74_09340) | 1971585..1972409 | - | 825 | WP_032605628.1 | hypothetical protein | - |
| PYH74_RS09345 (PYH74_09345) | 1972576..1973034 | - | 459 | WP_002455767.1 | GyrI-like domain-containing protein | - |
| PYH74_RS09350 (PYH74_09350) | 1973301..1973942 | - | 642 | WP_000855537.1 | hypothetical protein | ARG |
| PYH74_RS09355 (PYH74_09355) | 1974679..1974933 | - | 255 | WP_080392076.1 | DUF3102 domain-containing protein | - |
| PYH74_RS09360 (PYH74_09360) | 1975110..1976150 | - | 1041 | WP_088922757.1 | hypothetical protein | - |
| PYH74_RS09365 (PYH74_09365) | 1976143..1976853 | - | 711 | WP_060554433.1 | hypothetical protein | - |
| PYH74_RS09370 (PYH74_09370) | 1976855..1977328 | - | 474 | WP_060554431.1 | hypothetical protein | - |
| PYH74_RS09375 (PYH74_09375) | 1977476..1977961 | - | 486 | WP_060554429.1 | terminase small subunit | - |
| PYH74_RS09380 (PYH74_09380) | 1978021..1978707 | - | 687 | WP_123985735.1 | hypothetical protein | - |
| PYH74_RS09385 (PYH74_09385) | 1978727..1979260 | - | 534 | WP_088922758.1 | hypothetical protein | - |
| PYH74_RS09390 (PYH74_09390) | 1979273..1979608 | - | 336 | WP_172953380.1 | pathogenicity island protein | - |
| PYH74_RS09395 (PYH74_09395) | 1979950..1980593 | - | 644 | Protein_1817 | pathogenicity island protein | - |
| PYH74_RS09400 (PYH74_09400) | 1980594..1980950 | - | 357 | WP_060554420.1 | hypothetical protein | - |
| PYH74_RS09405 (PYH74_09405) | 1980943..1981296 | - | 354 | WP_060554419.1 | hypothetical protein | - |
| PYH74_RS09410 (PYH74_09410) | 1981545..1982915 | - | 1371 | WP_282888222.1 | phage/plasmid primase, P4 family | - |
| PYH74_RS09415 (PYH74_09415) | 1982927..1983796 | - | 870 | WP_060554417.1 | primase alpha helix C-terminal domain-containing protein | - |
| PYH74_RS09420 (PYH74_09420) | 1983881..1984222 | - | 342 | WP_060554416.1 | hypothetical protein | - |
| PYH74_RS09425 (PYH74_09425) | 1984227..1984436 | - | 210 | WP_060554415.1 | hypothetical protein | - |
| PYH74_RS09430 (PYH74_09430) | 1984441..1984596 | - | 156 | WP_172953370.1 | hypothetical protein | - |
| PYH74_RS09435 (PYH74_09435) | 1984612..1984830 | - | 219 | WP_032603302.1 | helix-turn-helix transcriptional regulator | - |
| PYH74_RS09440 (PYH74_09440) | 1984984..1985721 | + | 738 | WP_032603303.1 | helix-turn-helix transcriptional regulator | - |
| PYH74_RS09445 (PYH74_09445) | 1985736..1986842 | + | 1107 | WP_060554440.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PYH74_RS09455 (PYH74_09455) | 1987421..1987891 | - | 471 | WP_001829588.1 | SsrA-binding protein SmpB | - |
| PYH74_RS09460 (PYH74_09460) | 1987916..1990294 | - | 2379 | WP_002438919.1 | ribonuclease R | - |
| PYH74_RS09465 (PYH74_09465) | 1990329..1991069 | - | 741 | WP_001829672.1 | carboxylesterase | - |
| PYH74_RS09470 (PYH74_09470) | 1991370..1991603 | - | 234 | WP_001829669.1 | preprotein translocase subunit SecG | - |
| PYH74_RS09475 (PYH74_09475) | 1991672..1992130 | - | 459 | WP_001829646.1 | hypothetical protein | - |
| PYH74_RS09480 (PYH74_09480) | 1992296..1993600 | - | 1305 | WP_001829595.1 | phosphopyruvate hydratase | - |
| PYH74_RS09485 (PYH74_09485) | 1993739..1995256 | - | 1518 | WP_002497559.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|