MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 38109 bp
Accession: NZ_CP118672 Location: 1..38109 Organism: Komagataeibacter nataicola strain DS12 Replicon: plasmid pKNA09
Accession: NZ_CP118672 Location: 1..38109 Organism: Komagataeibacter nataicola strain DS12 Replicon: plasmid pKNA09
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LV564_RS00005 (LV564_00005) | 277..1512 | + | 1236 | WP_275881081.1 | hypothetical protein | - |
| LV564_RS00010 (LV564_00010) | 1683..2780 | - | 1098 | WP_275881082.1 | IS630 family transposase ISBj5 | Transposase |
| LV564_RS00015 (LV564_00015) | 3088..3522 | + | 435 | WP_275881083.1 | hypothetical protein | - |
| LV564_RS00020 (LV564_00020) | 3522..4349 | + | 828 | WP_275881084.1 | hypothetical protein | - |
| LV564_RS00025 (LV564_00025) | 4750..5238 | + | 489 | WP_112210140.1 | IS66 family transposase ISAzca2 | Transposase |
| LV564_RS00030 (LV564_00030) | 5235..5582 | + | 348 | WP_275881085.1 | IS66 family transposase ISAzs20 | Transposase |
| LV564_RS00035 (LV564_00035) | 5648..6019 | + | 372 | WP_275881086.1 | IS66 family transposase ISAzs20 | Transposase |
| LV564_RS00040 (LV564_00040) | 6196..6780 | + | 585 | WP_019087712.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| LV564_RS00045 (LV564_00045) | 6784..8499 | + | 1716 | WP_275881087.1 | Tn3 family transposase TnpA_ISMpo10 | Transposase |
| LV564_RS00050 (LV564_00050) | 8913..9392 | - | 480 | WP_275881088.1 | DUF4411 family protein | - |
| LV564_RS00055 (LV564_00055) | 9389..10555 | - | 1167 | WP_275881089.1 | ImmA/IrrE family metallo-endopeptidase | - |
| LV564_RS00060 (LV564_00060) | 10992..11288 | + | 297 | WP_275881095.1 | WGR domain-containing protein | - |
| LV564_RS00065 (LV564_00065) | 11285..11920 | + | 636 | WP_275881090.1 | IS91 family transposase ISTha3 | Transposase |
| LV564_RS00070 (LV564_00070) | 12003..12656 | + | 654 | WP_110581341.1 | hypothetical protein | VF |
| LV564_RS00075 (LV564_00075) | 12653..12943 | + | 291 | WP_039733960.1 | hypothetical protein | - |
| LV564_RS00080 (LV564_00080) | 13005..14105 | - | 1101 | WP_275881091.1 | replication initiator protein A | - |
| LV564_RS00085 (LV564_00085) | 14987..15223 | + | 237 | WP_040133518.1 | DUF4160 domain-containing protein | - |
| LV564_RS00090 (LV564_00090) | 15213..15620 | + | 408 | WP_275881092.1 | DUF2442 domain-containing protein | - |
| LV564_RS00095 (LV564_00095) | 15932..16174 | + | 243 | WP_053324047.1 | BrnA antitoxin family protein | - |
| LV564_RS00100 (LV564_00100) | 16487..16759 | - | 273 | WP_053324051.1 | HigA family addiction module antitoxin | - |
| LV564_RS00105 (LV564_00105) | 16837..17013 | - | 177 | WP_010511397.1 | hypothetical protein | - |
| LV564_RS00110 (LV564_00110) | 17051..17275 | - | 225 | WP_010511395.1 | helix-turn-helix transcriptional regulator | - |
| LV564_RS00115 (LV564_00115) | 17370..18140 | + | 771 | WP_275881093.1 | StbB | - |
| LV564_RS00120 (LV564_00120) | 18535..20184 | + | 1650 | WP_275881094.1 | 2-oxoglutarate-dependent ethylene/succinate-forming enzyme | VF |
| LV564_RS00125 (LV564_00125) | 20529..20693 | - | 165 | WP_166498087.1 | hypothetical protein | - |
| LV564_RS00130 (LV564_00130) | 21003..21488 | - | 486 | WP_275881072.1 | hypothetical protein | - |
| LV564_RS00135 (LV564_00135) | 21887..22309 | + | 423 | WP_034933799.1 | hypothetical protein | - |
| LV564_RS00140 (LV564_00140) | 22512..22763 | + | 252 | WP_275879433.1 | plasmid stabilization protein | Antitoxin Detail |
| LV564_RS00145 (LV564_00145) | 22760..23182 | + | 423 | WP_275881073.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LV564_RS00150 (LV564_00150) | 23388..24119 | - | 732 | WP_275881074.1 | SprT family zinc-dependent metalloprotease | - |
| LV564_RS00155 (LV564_00155) | 24119..27418 | - | 3300 | WP_275881075.1 | HsdR family type I site-specific deoxyribonuclease | - |
| LV564_RS00160 (LV564_00160) | 27449..28642 | - | 1194 | WP_275881076.1 | restriction endonuclease subunit S | - |
| LV564_RS00165 (LV564_00165) | 28632..30158 | - | 1527 | WP_275881077.1 | type I restriction-modification system subunit M | - |
| LV564_RS00170 (LV564_00170) | 30192..30773 | - | 582 | WP_275881078.1 | restriction endonuclease subunit S | - |
| LV564_RS00175 (LV564_00175) | 30841..31227 | - | 387 | WP_275881096.1 | helix-turn-helix domain-containing protein | - |
| LV564_RS00180 (LV564_00180) | 31328..32348 | + | 1021 | Protein_35 | Zinc-type alcohol dehydrogenase-like protein | VF |
| LV564_RS00185 (LV564_00185) | 32365..32748 | + | 384 | WP_275881097.1 | nuclear transport factor 2 family protein | - |
| LV564_RS00190 (LV564_00190) | 32766..33179 | + | 414 | Protein_37 | cupin domain-containing protein | - |
| LV564_RS00195 (LV564_00195) | 33212..34336 | + | 1125 | WP_275881079.1 | L-dopachrome tautomerase-related protein | - |
| LV564_RS00200 (LV564_00200) | 34346..34981 | - | 636 | WP_275881080.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| LV564_RS00205 (LV564_00205) | 35102..38068 | + | 2967 | WP_275881098.1 | Tn3 family transposase TnpA_ISPa40 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|