MGE detailed information
MGE type: Genomic_island MGE length: 12500 bp
Accession: NZ_CP118607 Location: 855619..868118 Organism: Pseudomonas sp. PSKL.D1 Replicon: chromosome
Accession: NZ_CP118607 Location: 855619..868118 Organism: Pseudomonas sp. PSKL.D1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PVV54_RS03600 (PVV54_03600) | 851606..852559 | - | 954 | WP_274908630.1 | LysR family transcriptional regulator | - |
| PVV54_RS03605 (PVV54_03605) | 852692..854218 | + | 1527 | WP_274908631.1 | CoA-acylating methylmalonate-semialdehyde dehydrogenase | - |
| PVV54_RS03610 (PVV54_03610) | 854229..855119 | + | 891 | WP_274908632.1 | 3-hydroxyisobutyrate dehydrogenase | - |
| PVV54_RS03615 (PVV54_03615) | 855619..856590 | - | 972 | WP_274908633.1 | hypothetical protein | - |
| PVV54_RS03620 (PVV54_03620) | 856601..857089 | - | 489 | WP_274908634.1 | Protein hcp1 | VF |
| PVV54_RS03625 (PVV54_03625) | 857410..857550 | + | 141 | Protein_704 | 3-hydroxyisobutyrate dehydrogenase | - |
| PVV54_RS03630 (PVV54_03630) | 857623..858015 | - | 393 | WP_274908635.1 | hypothetical protein | - |
| PVV54_RS03635 (PVV54_03635) | 858012..858989 | - | 978 | WP_274908636.1 | hypothetical protein | - |
| PVV54_RS03640 (PVV54_03640) | 859000..859488 | - | 489 | WP_274908634.1 | Protein hcp1 | VF |
| PVV54_RS03645 (PVV54_03645) | 859787..860131 | - | 345 | WP_003258412.1 | cupin domain-containing protein | - |
| PVV54_RS03650 (PVV54_03650) | 860228..861160 | - | 933 | WP_274908637.1 | CDF family Co(II)/Ni(II) efflux transporter DmeF | - |
| PVV54_RS03655 (PVV54_03655) | 861231..861506 | + | 276 | WP_274908638.1 | metal/formaldehyde-sensitive transcriptional repressor | - |
| PVV54_RS03660 (PVV54_03660) | 861522..862454 | - | 933 | WP_274908639.1 | hypothetical protein | VF |
| PVV54_RS03665 (PVV54_03665) | 862456..863079 | - | 624 | WP_274908640.1 | lysophospholipid acyltransferase family protein | - |
| PVV54_RS03670 (PVV54_03670) | 863090..863521 | - | 432 | WP_274908641.1 | hypothetical protein | - |
| PVV54_RS03675 (PVV54_03675) | 863518..864897 | - | 1380 | WP_274908642.1 | phosphatase PAP2/dual specificity phosphatase family protein | - |
| PVV54_RS03680 (PVV54_03680) | 864894..866651 | - | 1758 | WP_274908643.1 | bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase | - |
| PVV54_RS03685 (PVV54_03685) | 866682..867287 | - | 606 | WP_274908644.1 | CDP-alcohol phosphatidyltransferase family protein | - |
| PVV54_RS03690 (PVV54_03690) | 867487..867714 | + | 228 | WP_274908645.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PVV54_RS03695 (PVV54_03695) | 867711..868118 | + | 408 | WP_274908646.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PVV54_RS03700 (PVV54_03700) | 868169..868933 | + | 765 | WP_274908647.1 | sulfite exporter TauE/SafE family protein | - |
| PVV54_RS03705 (PVV54_03705) | 868923..869237 | - | 315 | WP_274908648.1 | putative quinol monooxygenase | - |
| PVV54_RS03710 (PVV54_03710) | 869397..869987 | + | 591 | WP_274908649.1 | NAD(P)H-dependent oxidoreductase | - |
| PVV54_RS03715 (PVV54_03715) | 870055..870951 | + | 897 | WP_274908650.1 | LysR family transcriptional regulator | - |
| PVV54_RS03720 (PVV54_03720) | 871070..872737 | + | 1668 | WP_274908651.1 | gamma-glutamyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|