MGE detailed information
MGE type: Mobilizable plasmid MGE length: 60980 bp
Accession: NZ_CP118604 Location: 1..60980 Organism: Escherichia coli strain NB4833 Replicon: plasmid pNB4833-NDM-13
Accession: NZ_CP118604 Location: 1..60980 Organism: Escherichia coli strain NB4833 Replicon: plasmid pNB4833-NDM-13
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OU688_RS25600 (OU688_25600) | 1..1029 | + | 1029 | WP_001175215.1 | plasmid replication initiator RepA | - |
| OU688_RS25605 (OU688_25605) | 1730..1920 | + | 191 | Protein_1 | hypothetical protein | - |
| OU688_RS25610 (OU688_25610) | 2570..2722 | + | 153 | Protein_2 | DUF5431 family protein | - |
| OU688_RS25615 (OU688_25615) | 2667..2789 | + | 123 | WP_223685802.1 | Hok/Gef family protein | - |
| OU688_RS25620 (OU688_25620) | 2939..3535 | + | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| OU688_RS25625 (OU688_25625) | 3553..3837 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| OU688_RS25630 (OU688_25630) | 3911..4576 | - | 666 | WP_000532149.1 | division plane positioning ATPase MipZ | - |
| OU688_RS25635 (OU688_25635) | 5165..5494 | + | 330 | WP_001542022.1 | hypothetical protein | - |
| OU688_RS25640 (OU688_25640) | 5895..6410 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| OU688_RS25645 (OU688_25645) | 6514..7056 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| OU688_RS25650 (OU688_25650) | 7053..7307 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| OU688_RS25655 (OU688_25655) | 7304..7546 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| OU688_RS25660 (OU688_25660) | 8117..8410 | + | 294 | WP_000673428.1 | hypothetical protein | - |
| OU688_RS25665 (OU688_25665) | 8899..9147 | + | 249 | WP_000513532.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| OU688_RS25670 (OU688_25670) | 9144..9491 | + | 348 | WP_000681609.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| OU688_RS25675 (OU688_25675) | 9579..10022 | - | 444 | WP_023223351.1 | hypothetical protein | - |
| OU688_RS25680 (OU688_25680) | 10263..10562 | + | 300 | WP_034169410.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| OU688_RS25685 (OU688_25685) | 10822..11148 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| OU688_RS25690 (OU688_25690) | 11150..11473 | - | 324 | WP_223666488.1 | hypothetical protein | - |
| OU688_RS25695 (OU688_25695) | 11450..11590 | - | 141 | Protein_19 | hypothetical protein | - |
| OU688_RS25700 (OU688_25700) | 11610..12317 | - | 708 | WP_000108794.1 | hypothetical protein | - |
| OU688_RS25705 (OU688_25705) | 12319..13071 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| OU688_RS25710 (OU688_25710) | 13089..13490 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| OU688_RS25715 (OU688_25715) | 13858..14199 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| OU688_RS25720 (OU688_25720) | 14196..18509 | + | 4314 | WP_034169409.1 | hypothetical protein | - |
| OU688_RS25725 (OU688_25725) | 18730..20355 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| OU688_RS25730 (OU688_25730) | 20427..21200 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| OU688_RS25735 (OU688_25735) | 21159..21599 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| OU688_RS25740 (OU688_25740) | 21945..22151 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| OU688_RS25745 (OU688_25745) | 22220..24385 | - | 2166 | WP_034169408.1 | type IA DNA topoisomerase | - |
| OU688_RS25750 (OU688_25750) | 24390..24965 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| OU688_RS25755 (OU688_25755) | 25135..26811 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| OU688_RS25760 (OU688_25760) | 26906..27438 | - | 533 | Protein_32 | thermonuclease family protein | - |
| OU688_RS25765 (OU688_25765) | 27468..28121 | - | 654 | WP_170855322.1 | hypothetical protein | - |
| OU688_RS25770 (OU688_25770) | 28133..29257 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| OU688_RS25775 (OU688_25775) | 29735..30301 | + | 567 | WP_274910555.1 | hypothetical protein | - |
| OU688_RS25780 (OU688_25780) | 31032..32279 | - | 1248 | WP_274910554.1 | hypothetical protein | VF |
| OU688_RS25785 (OU688_25785) | 32292..32927 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| OU688_RS25790 (OU688_25790) | 32931..33413 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| OU688_RS25795 (OU688_25795) | 33479..34042 | - | 564 | WP_034169414.1 | type 4 pilus major pilin | - |
| OU688_RS25800 (OU688_25800) | 34092..35201 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| OU688_RS25805 (OU688_25805) | 35192..36730 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| OU688_RS25810 (OU688_25810) | 36755..37249 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| OU688_RS25815 (OU688_25815) | 37233..38543 | - | 1311 | WP_001454111.1 | type 4b pilus protein PilO2 | - |
| OU688_RS25820 (OU688_25820) | 38594..40237 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| OU688_RS25825 (OU688_25825) | 40230..40766 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| OU688_RS25830 (OU688_25830) | 40813..42771 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| OU688_RS25835 (OU688_25835) | 42787..43842 | - | 1056 | WP_001542006.1 | Type IV secretion system protein VirB11 | VF |
| OU688_RS25840 (OU688_25840) | 43861..45000 | - | 1140 | WP_034169415.1 | Type IV secretion system protein virB10 | VF |
| OU688_RS25845 (OU688_25845) | 44990..45760 | - | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| OU688_RS25850 (OU688_25850) | 45757..46491 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| OU688_RS25855 (OU688_25855) | 46657..49014 | - | 2358 | WP_000548950.1 | VirB4 family type IV secretion system protein | - |
| OU688_RS25860 (OU688_25860) | 49020..49340 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| OU688_RS25865 (OU688_25865) | 49411..49701 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| OU688_RS25870 (OU688_25870) | 49701..50285 | - | 585 | WP_001177117.1 | Type IV secretion system protein virB1 | VF |
| OU688_RS25875 (OU688_25875) | 50306..50704 | - | 399 | WP_001153669.1 | hypothetical protein | - |
| OU688_RS25880 (OU688_25880) | 50823..51260 | - | 438 | WP_034169416.1 | type IV pilus biogenesis protein PilM | - |
| OU688_RS25885 (OU688_25885) | 51266..52501 | - | 1236 | WP_034169417.1 | hypothetical protein | VF |
| OU688_RS25890 (OU688_25890) | 52504..52803 | - | 300 | WP_000835763.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| OU688_RS25895 (OU688_25895) | 52851..53660 | + | 810 | WP_024237698.1 | DUF5710 domain-containing protein | - |
| OU688_RS25900 (OU688_25900) | 53883..54107 | - | 225 | WP_000713562.1 | EexN family lipoprotein | - |
| OU688_RS25905 (OU688_25905) | 54116..54760 | - | 645 | WP_001310442.1 | hypothetical protein | VF |
| OU688_RS25910 (OU688_25910) | 54766..55761 | - | 996 | WP_001028540.1 | hypothetical protein | VF |
| OU688_RS25915 (OU688_25915) | 55765..56022 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| OU688_RS25920 (OU688_25920) | 56019..56321 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| OU688_RS25925 (OU688_25925) | 56302..56559 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| OU688_RS25930 (OU688_25930) | 56592..57038 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| OU688_RS25935 (OU688_25935) | 57049..57219 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| OU688_RS25940 (OU688_25940) | 57223..57666 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| OU688_RS25945 (OU688_25945) | 58040..58993 | - | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| OU688_RS25950 (OU688_25950) | 59020..59196 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| OU688_RS25955 (OU688_25955) | 59189..59404 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| OU688_RS25960 (OU688_25960) | 59397..59849 | - | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|