MGE detailed information
MGE type: Conjugative plasmid MGE length: 86351 bp
Accession: NZ_CP118543 Location: 1..86351 Organism: Salmonella sp. CVCC 1806 Replicon: plasmid p1
Accession: NZ_CP118543 Location: 1..86351 Organism: Salmonella sp. CVCC 1806 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PWA52_RS22790 (PWA52_22790) | 1..210 | + | 210 | WP_193580625.1 | hypothetical protein | - |
| PWA52_RS22795 (PWA52_22795) | 804..1118 | + | 315 | Protein_2 | single-stranded DNA-binding protein SSB2 | - |
| PWA52_RS22800 (PWA52_22800) | 1120..1260 | + | 141 | Protein_3 | DUF905 family protein | - |
| PWA52_RS22805 (PWA52_22805) | 1329..3312 | + | 1984 | Protein_4 | ParB/RepB/Spo0J family partition protein | - |
| PWA52_RS22810 (PWA52_22810) | 3352..3486 | + | 135 | Protein_5 | conjugation system SOS inhibitor PsiB family protein | - |
| PWA52_RS22815 (PWA52_22815) | 3480..4136 | + | 657 | Protein_6 | plasmid SOS inhibition protein A | - |
| PWA52_RS22820 (PWA52_22820) | 4171..4299 | + | 129 | WP_001746558.1 | hypothetical protein | - |
| PWA52_RS22825 (PWA52_22825) | 4385..4543 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| PWA52_RS22830 (PWA52_22830) | 4646..5464 | + | 819 | Protein_9 | DUF932 domain-containing protein | - |
| PWA52_RS22835 (PWA52_22835) | 5775..6245 | - | 471 | WP_024134052.1 | hypothetical protein | VF |
| PWA52_RS22840 (PWA52_22840) | 6668..7048 | + | 381 | WP_001151568.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PWA52_RS22845 (PWA52_22845) | 7243..7932 | + | 690 | WP_001746563.1 | conjugal transfer transcriptional regulator TraJ | - |
| PWA52_RS22850 (PWA52_22850) | 8025..8426 | + | 402 | WP_032490308.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| PWA52_RS22855 (PWA52_22855) | 8468..8830 | + | 363 | WP_001274202.1 | type IV conjugative transfer system pilin TraA | - |
| PWA52_RS22860 (PWA52_22860) | 8845..9156 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| PWA52_RS22865 (PWA52_22865) | 9178..9744 | + | 567 | WP_000399760.1 | type IV conjugative transfer system protein TraE | - |
| PWA52_RS22870 (PWA52_22870) | 9731..10471 | + | 741 | WP_015059453.1 | type-F conjugative transfer system secretin TraK | - |
| PWA52_RS22875 (PWA52_22875) | 10471..11892 | + | 1422 | WP_269724460.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| PWA52_RS22880 (PWA52_22880) | 11882..12478 | + | 597 | WP_000527898.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| PWA52_RS22885 (PWA52_22885) | 12456..12680 | + | 225 | WP_001746950.1 | DUF2689 domain-containing protein | - |
| PWA52_RS22890 (PWA52_22890) | 12677..13192 | + | 516 | WP_001746951.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PWA52_RS22895 (PWA52_22895) | 13327..13548 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| PWA52_RS22900 (PWA52_22900) | 13541..14008 | + | 468 | WP_000549559.1 | hypothetical protein | - |
| PWA52_RS22905 (PWA52_22905) | 14005..14388 | + | 384 | WP_000870325.1 | hypothetical protein | - |
| PWA52_RS22910 (PWA52_22910) | 14404..17051 | + | 2648 | Protein_25 | type IV secretion system protein TraC | - |
| PWA52_RS22915 (PWA52_22915) | 17026..17412 | + | 387 | WP_000102756.1 | type-F conjugative transfer system protein TrbI | - |
| PWA52_RS22920 (PWA52_22920) | 17409..18041 | + | 633 | WP_015059451.1 | type-F conjugative transfer system protein TraW | - |
| PWA52_RS22925 (PWA52_22925) | 18038..19030 | + | 993 | WP_269724459.1 | conjugal transfer pilus assembly protein TraU | - |
| PWA52_RS22930 (PWA52_22930) | 19049..19357 | + | 309 | WP_001576663.1 | hypothetical protein | - |
| PWA52_RS22935 (PWA52_22935) | 19342..19980 | + | 639 | WP_079786993.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PWA52_RS22940 (PWA52_22940) | 20017..20436 | + | 420 | WP_001229398.1 | HNH endonuclease | - |
| PWA52_RS22945 (PWA52_22945) | 20433..22259 | + | 1827 | WP_001746541.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PWA52_RS22950 (PWA52_22950) | 22270..22746 | + | 477 | WP_001746543.1 | hypothetical protein | - |
| PWA52_RS22955 (PWA52_22955) | 22757..22972 | + | 216 | WP_001746544.1 | conjugal transfer protein TrbE | - |
| PWA52_RS22960 (PWA52_22960) | 22985..23728 | + | 744 | WP_001746545.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PWA52_RS22965 (PWA52_22965) | 23942..24235 | + | 294 | WP_001233883.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PWA52_RS22970 (PWA52_22970) | 24222..24770 | + | 549 | WP_000055842.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PWA52_RS22975 (PWA52_22975) | 24760..26031 | + | 1272 | Protein_38 | conjugal transfer pilus assembly protein TraH | - |
| PWA52_RS22980 (PWA52_22980) | 27268..27750 | + | 483 | WP_000787664.1 | hypothetical protein | - |
| PWA52_RS22985 (PWA52_22985) | 27996..28727 | + | 732 | WP_000850404.1 | conjugal transfer complement resistance protein TraT | - |
| PWA52_RS22990 (PWA52_22990) | 29104..31338 | + | 2235 | WP_001747308.1 | type IV conjugative transfer system coupling protein TraD | - |
| PWA52_RS22995 (PWA52_22995) | 31338..36317 | + | 4980 | WP_269724721.1 | Multifunctional conjugation protein TraI | Relaxase |
| PWA52_RS23000 (PWA52_23000) | 36337..37077 | + | 741 | WP_000177627.1 | conjugal transfer pilus acetylase TraX | - |
| PWA52_RS23005 (PWA52_23005) | 37132..37695 | + | 564 | WP_000129019.1 | fertility inhibition protein FinO | - |
| PWA52_RS23010 (PWA52_23010) | 37812..38094 | + | 283 | Protein_45 | disulfide bond formation protein DsbA | - |
| PWA52_RS23015 (PWA52_23015) | 38086..38265 | + | 180 | WP_223610914.1 | disulfide bond formation protein DsbA | - |
| PWA52_RS23020 (PWA52_23020) | 38375..38941 | + | 567 | Protein_47 | phospholipase D family protein | - |
| PWA52_RS23025 (PWA52_23025) | 39052..39318 | + | 267 | WP_001576653.1 | replication regulatory protein RepA | - |
| PWA52_RS23030 (PWA52_23030) | 39566..39643 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| PWA52_RS23035 (PWA52_23035) | 39624..40505 | + | 882 | WP_001746973.1 | incFII family plasmid replication initiator RepA | - |
| PWA52_RS23040 (PWA52_23040) | 41300..41704 | - | 405 | Protein_51 | IS66 family transposase zinc-finger binding domain-containing protein | - |
| PWA52_RS23045 (PWA52_23045) | 41696..41910 | - | 215 | Protein_52 | IS66 family transposase ISEc8 | Transposase |
| PWA52_RS23050 (PWA52_23050) | 42065..42262 | - | 198 | WP_001675602.1 | transposase | - |
| PWA52_RS23055 (PWA52_23055) | 42429..43160 | - | 732 | WP_001746755.1 | hypothetical protein | - |
| PWA52_RS23060 (PWA52_23060) | 43388..44047 | - | 660 | WP_001575507.1 | hypothetical protein | - |
| PWA52_RS23065 (PWA52_23065) | 45506..45778 | + | 273 | WP_001178538.1 | hypothetical protein | - |
| PWA52_RS23070 (PWA52_23070) | 46014..46811 | + | 798 | WP_282482677.1 | hypothetical protein | VF |
| PWA52_RS23075 (PWA52_23075) | 46839..47603 | + | 765 | WP_001746754.1 | hypothetical protein | VF |
| PWA52_RS23080 (PWA52_23080) | 47590..47865 | + | 276 | WP_001020576.1 | hypothetical protein | - |
| PWA52_RS23085 (PWA52_23085) | 47865..48578 | + | 714 | WP_000801114.1 | hypothetical protein | VF |
| PWA52_RS23090 (PWA52_23090) | 48703..49287 | + | 585 | WP_024138406.1 | hypothetical protein | - |
| PWA52_RS23095 (PWA52_23095) | 49360..49572 | + | 213 | WP_000063791.1 | P fimbrial regulatory protein KS71A | VF |
| PWA52_RS23100 (PWA52_23100) | 49833..49994 | + | 162 | WP_001816720.1 | hypothetical protein | - |
| PWA52_RS23105 (PWA52_23105) | 50020..50868 | + | 849 | WP_000175397.1 | SdiA-regulated domain-containing protein | - |
| PWA52_RS23110 (PWA52_23110) | 51438..51866 | - | 429 | WP_001746752.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PWA52_RS23115 (PWA52_23115) | 51863..52093 | - | 231 | WP_001261283.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PWA52_RS23120 (PWA52_23120) | 52838..53056 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| PWA52_RS23125 (PWA52_23125) | 53058..53363 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| PWA52_RS23130 (PWA52_23130) | 53365..53655 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| PWA52_RS23135 (PWA52_23135) | 53652..54173 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| PWA52_RS23140 (PWA52_23140) | 54208..54990 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| PWA52_RS23145 (PWA52_23145) | 54999..55550 | + | 552 | WP_079786988.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| PWA52_RS23150 (PWA52_23150) | 55737..56225 | + | 489 | WP_001075507.1 | CaiF/GrlA family transcriptional regulator | - |
| PWA52_RS23155 (PWA52_23155) | 56219..56704 | + | 486 | WP_000905606.1 | membrane protein | - |
| PWA52_RS23160 (PWA52_23160) | 56981..57268 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| PWA52_RS23165 (PWA52_23165) | 57424..57984 | + | 561 | WP_071785580.1 | Invasin | VF |
| PWA52_RS23170 (PWA52_23170) | 58051..58401 | - | 351 | WP_001746584.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| PWA52_RS23175 (PWA52_23175) | 58458..58886 | + | 429 | WP_039563782.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| PWA52_RS23180 (PWA52_23180) | 59013..59663 | - | 651 | WP_001746582.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| PWA52_RS23185 (PWA52_23185) | 59924..60649 | - | 726 | WP_269724464.1 | MAPK phosphothreonine lyase | VF |
| PWA52_RS23190 (PWA52_23190) | 60930..62705 | - | 1776 | WP_001746580.1 | Mono(ADP-ribosyl)transferase SpvB | VF |
| PWA52_RS23195 (PWA52_23195) | 62757..62924 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| PWA52_RS23200 (PWA52_23200) | 62887..63654 | - | 768 | WP_269724463.1 | virulence protein SpvA | - |
| PWA52_RS23205 (PWA52_23205) | 63828..63992 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| PWA52_RS23210 (PWA52_23210) | 64166..65059 | - | 894 | WP_000346690.1 | virulence genes transcriptional activator SpvR | - |
| PWA52_RS23215 (PWA52_23215) | 65667..66704 | + | 1038 | WP_269724462.1 | IS630 family transposase ISEc33 | Transposase |
| PWA52_RS23220 (PWA52_23220) | 66893..67918 | - | 1026 | WP_079786990.1 | ExeA family protein | - |
| PWA52_RS23225 (PWA52_23225) | 67851..69515 | - | 1665 | WP_000098783.1 | IS481 family transposase ISAzs36 | Transposase |
| PWA52_RS23230 (PWA52_23230) | 69499..70059 | - | 561 | WP_001240331.1 | Tn3 family transposase ISPsy42 | Transposase |
| PWA52_RS23235 (PWA52_23235) | 70266..71006 | - | 741 | WP_001541566.1 | carbonic anhydrase family protein | - |
| PWA52_RS23240 (PWA52_23240) | 71628..72116 | - | 489 | WP_001746759.1 | hypothetical protein | - |
| PWA52_RS23245 (PWA52_23245) | 72375..73490 | + | 1116 | WP_079786991.1 | DNA-binding protein | - |
| PWA52_RS23250 (PWA52_23250) | 73576..73992 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| PWA52_RS23255 (PWA52_23255) | 74095..74511 | + | 417 | WP_000988946.1 | hypothetical protein | - |
| PWA52_RS23260 (PWA52_23260) | 74568..75169 | + | 602 | Protein_95 | DUF2913 family protein | - |
| PWA52_RS23265 (PWA52_23265) | 75166..76107 | - | 942 | WP_000728917.1 | Recombination-promoting nuclease RpnA | VF |
| PWA52_RS23270 (PWA52_23270) | 76522..77727 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| PWA52_RS23275 (PWA52_23275) | 77727..78702 | + | 976 | Protein_98 | ParB family protein | - |
| PWA52_RS23280 (PWA52_23280) | 78784..80058 | - | 1275 | WP_015059462.1 | Y-family DNA polymerase | - |
| PWA52_RS23285 (PWA52_23285) | 80058..80480 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PWA52_RS23290 (PWA52_23290) | 80991..81461 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| PWA52_RS23295 (PWA52_23295) | 81454..81810 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| PWA52_RS23300 (PWA52_23300) | 81748..82029 | - | 282 | WP_146671468.1 | hypothetical protein | - |
| PWA52_RS23305 (PWA52_23305) | 82192..82872 | + | 681 | WP_001747300.1 | DNA methylase | - |
| PWA52_RS23310 (PWA52_23310) | 82872..83093 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| PWA52_RS23315 (PWA52_23315) | 83149..83562 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
| PWA52_RS23320 (PWA52_23320) | 83634..84398 | + | 765 | WP_001747302.1 | hypothetical protein | - |
| PWA52_RS23325 (PWA52_23325) | 84894..85328 | + | 435 | WP_001200150.1 | antirestriction protein | - |
| PWA52_RS23330 (PWA52_23330) | 85395..85829 | + | 435 | WP_000274534.1 | DUF1380 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|