MGE detailed information
MGE type: Genomic_island MGE length: 19958 bp
Accession: NZ_CP118542 Location: 4027751..4047708 Organism: Salmonella sp. CVCC 1806 Replicon: chromosome
Accession: NZ_CP118542 Location: 4027751..4047708 Organism: Salmonella sp. CVCC 1806 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PWA52_RS19585 (4023684) | 4023684..4024214 | - | 531 | WP_000907671.1 | Hcp family type VI secretion system effector | - |
| PWA52_RS19590 (4024932) | 4024932..4025945 | + | 1014 | WP_001094621.1 | tryptophan--tRNA ligase | - |
| PWA52_RS19595 (4025946) | 4025946..4026719 | - | 774 | WP_000841654.1 | Uxu operon transcriptional regulator | - |
| PWA52_RS19600 (4027069) | 4027069..4027734 | + | 666 | WP_001576579.1 | dienelactone hydrolase family protein | - |
| PWA52_RS19605 (4027751) | 4027751..4028212 | - | 462 | WP_079786749.1 | DUF302 domain-containing protein | - |
| PWA52_RS19610 (4028417) | 4028417..4029328 | - | 912 | WP_000556772.1 | hypothetical protein | - |
| PWA52_RS19615 (4029680) | 4029680..4030288 | - | 609 | WP_000864863.1 | DUF1062 domain-containing protein | - |
| PWA52_RS19620 (4030776) | 4030776..4031033 | + | 258 | WP_001054380.1 | YjhX family toxin | - |
| PWA52_RS19625 (4031038) | 4031038..4032669 | + | 1632 | WP_079786750.1 | class I SAM-dependent methyltransferase | - |
| PWA52_RS19630 (4033229) | 4033229..4033945 | + | 717 | WP_001747150.1 | hypothetical protein | VF |
| PWA52_RS19635 (4034425) | 4034425..4035300 | - | 876 | Protein_3851 | HNH endonuclease | - |
| PWA52_RS19640 (4035556) | 4035556..4036666 | - | 1111 | Protein_3852 | IS3 family transposase | - |
| PWA52_RS19645 (4036929) | 4036929..4037774 | - | 846 | WP_000490312.1 | YjiK family protein | - |
| PWA52_RS19650 (4037825) | 4037825..4037971 | - | 147 | WP_001141717.1 | hypothetical protein | - |
| PWA52_RS19655 (4037961) | 4037961..4038614 | - | 654 | WP_000178593.1 | DsbA family protein | - |
| PWA52_RS19660 (4038859) | 4038859..4039209 | - | 351 | WP_000135401.1 | hypothetical protein | VF |
| PWA52_RS19665 (4039194) | 4039194..4039403 | - | 210 | WP_000504711.1 | hypothetical protein | VF |
| PWA52_RS19670 (4039980) | 4039980..4040795 | + | 816 | WP_269724548.1 | AraC family transcriptional regulator | - |
| PWA52_RS19675 (4040829) | 4040829..4041026 | - | 198 | WP_231849110.1 | AfaD family invasin | - |
| PWA52_RS19680 (4041059) | 4041059..4041274 | - | 216 | WP_001077814.1 | hypothetical protein | - |
| PWA52_RS19685 (4041314) | 4041314..4041541 | - | 228 | WP_235147760.1 | hypothetical protein | VF |
| PWA52_RS19690 (4041617) | 4041617..4043716 | - | 2100 | Protein_3862 | hypothetical protein | VF |
| PWA52_RS19695 (4043733) | 4043733..4044473 | - | 741 | WP_001575372.1 | hypothetical protein | VF |
| PWA52_RS19700 (4044595) | 4044595..4045125 | - | 531 | WP_000909461.1 | hypothetical protein | VF |
| PWA52_RS19705 (4045447) | 4045447..4046580 | + | 1134 | Protein_3865 | IS3 family transposase | - |
| PWA52_RS19710 (4046612) | 4046612..4046752 | - | 141 | Protein_3866 | Arm DNA-binding domain-containing protein | - |
| PWA52_RS19715 (4047158) | 4047158..4047466 | - | 309 | WP_001199742.1 | CcdB family protein | Toxin Detail |
| PWA52_RS19720 (4047469) | 4047469..4047708 | - | 240 | WP_001118105.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PWA52_RS19725 (4047817) | 4047817..4048065 | - | 249 | WP_000168388.1 | ribbon-helix-helix domain-containing protein | - |
| PWA52_RS19730 (4048256) | 4048256..4048687 | - | 432 | Protein_3870 | helix-turn-helix domain-containing protein | - |
| PWA52_RS19740 (4049444) | 4049444..4050463 | + | 1020 | WP_000152558.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| PWA52_RS19745 (4050491) | 4050491..4051021 | - | 531 | WP_000896758.1 | gluconokinase | - |
| PWA52_RS19750 (4051238) | 4051238..4052269 | + | 1032 | WP_000453347.1 | L-idonate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|