MGE detailed information
MGE type: Prophage MGE length: 65530 bp
Accession: NZ_CP118542 Location: 2573070..2638599 Organism: Salmonella sp. CVCC 1806 Replicon: chromosome
Accession: NZ_CP118542 Location: 2573070..2638599 Organism: Salmonella sp. CVCC 1806 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| - | 2632797..2632900 | - | 104 | - | - | Toxin Detail |
| PWA52_RS12470 () | 2568583..2569080 | - | 498 | WP_269724557.1 | GAF domain-containing protein | - |
| PWA52_RS12475 () | 2569209..2570492 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| PWA52_RS12480 () | 2570461..2573094 | + | 2634 | WP_014341101.1 | PqiB family protein | - |
| PWA52_RS12485 () | 2573172..2574612 | + | 1441 | Protein_2447 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PWA52_RS12490 () | 2574730..2574966 | + | 237 | WP_024131108.1 | YebV family protein | - |
| PWA52_RS12495 () | 2575077..2575268 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| PWA52_RS12500 () | 2575287..2575937 | - | 651 | WP_079786671.1 | protein-serine/threonine phosphatase | - |
| PWA52_RS12505 () | 2576161..2576325 | - | 165 | WP_001134856.1 | membrane protein | - |
| PWA52_RS12510 () | 2576611..2577333 | - | 723 | WP_000182072.1 | hypothetical protein | VF |
| PWA52_RS12515 () | 2578017..2578412 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| PWA52_RS12520 () | 2578742..2579218 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| PWA52_RS12525 () | 2579591..2580010 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| PWA52_RS12530 () | 2580383..2580652 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| PWA52_RS12535 () | 2580818..2580958 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| PWA52_RS12540 () | 2581104..2582311 | - | 1208 | Protein_2458 | IS256 family transposase ISEc39 | Transposase |
| PWA52_RS12545 () | 2582381..2582847 | + | 467 | Protein_2459 | tyrosine-type recombinase/integrase | - |
| PWA52_RS12550 () | 2584097..2585011 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| PWA52_RS12555 () | 2585144..2585302 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| PWA52_RS12560 () | 2585312..2585926 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| PWA52_RS12565 () | 2586253..2586420 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| PWA52_RS12570 () | 2586414..2586560 | + | 147 | WP_014341103.1 | hypothetical protein | - |
| PWA52_RS12575 () | 2587074..2587199 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| PWA52_RS12580 () | 2587199..2587379 | + | 181 | Protein_2466 | IS3 family transposase | - |
| PWA52_RS12585 () | 2587769..2587969 | + | 201 | WP_001576015.1 | PagK family vesicle-borne virulence factor | - |
| PWA52_RS12590 () | 2588066..2588536 | - | 471 | Protein_2468 | tail fiber assembly protein | - |
| PWA52_RS12595 () | 2588515..2591040 | - | 2526 | WP_269724556.1 | prophage tail fiber N-terminal domain-containing protein | - |
| PWA52_RS12600 () | 2591094..2591336 | - | 243 | WP_000178848.1 | hypothetical protein | - |
| PWA52_RS12605 () | 2591375..2592238 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| PWA52_RS12610 () | 2592278..2594726 | - | 2449 | Protein_2472 | host specificity protein J | - |
| PWA52_RS12615 () | 2594798..2595502 | - | 705 | WP_001576012.1 | tail assembly protein | - |
| PWA52_RS12620 () | 2595406..2596137 | - | 732 | WP_000606352.1 | C40 family peptidase | - |
| PWA52_RS12625 () | 2596147..2596843 | - | 697 | Protein_2475 | phage minor tail protein L | - |
| PWA52_RS12630 () | 2596933..2597466 | + | 534 | WP_000877926.1 | hypothetical protein | VF |
| PWA52_RS12635 () | 2597583..2598080 | - | 498 | WP_000725267.1 | hypothetical protein | VF |
| PWA52_RS12640 () | 2598179..2598511 | - | 333 | WP_000978295.1 | phage tail protein | - |
| PWA52_RS12645 () | 2598508..2601495 | - | 2988 | WP_079787008.1 | phage tail tape measure protein | - |
| PWA52_RS12650 () | 2601575..2601904 | - | 330 | WP_010989009.1 | phage tail assembly protein T | - |
| PWA52_RS12655 () | 2601901..2602299 | - | 399 | WP_079787005.1 | phage minor tail protein G | - |
| PWA52_RS12660 () | 2602345..2603094 | - | 750 | WP_000132760.1 | phage tail protein | - |
| PWA52_RS12665 () | 2603106..2603507 | - | 402 | WP_020937015.1 | phage minor tail U family protein | - |
| PWA52_RS12670 () | 2603504..2604070 | - | 567 | WP_079787004.1 | phage tail protein | - |
| PWA52_RS12675 () | 2604051..2604350 | - | 300 | WP_269724555.1 | ATP-binding protein | - |
| PWA52_RS12680 () | 2604343..2604666 | - | 324 | WP_001107908.1 | DUF2190 family protein | - |
| PWA52_RS12685 () | 2604757..2606838 | - | 2082 | WP_010989008.1 | hypothetical protein | VF |
| PWA52_RS12690 () | 2606762..2608309 | - | 1548 | WP_001009212.1 | phage portal protein | - |
| PWA52_RS12695 () | 2608306..2608512 | - | 207 | WP_000196190.1 | hypothetical protein | - |
| PWA52_RS12700 () | 2608509..2610647 | - | 2139 | WP_000989241.1 | phage terminase large subunit family protein | - |
| PWA52_RS12705 () | 2610604..2611137 | - | 534 | WP_000371784.1 | DUF1441 family protein | - |
| PWA52_RS12710 () | 2611345..2611824 | - | 480 | WP_001541990.1 | lysis protein | - |
| PWA52_RS12715 () | 2611842..2612294 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| PWA52_RS12720 () | 2612278..2612607 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| PWA52_RS12725 () | 2612883..2613569 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| PWA52_RS12730 () | 2613930..2614379 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| PWA52_RS12735 () | 2614753..2615280 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| PWA52_RS12740 () | 2615374..2616063 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| PWA52_RS12745 () | 2616060..2616196 | - | 137 | Protein_2499 | YlcG family protein | - |
| PWA52_RS12750 () | 2616193..2616333 | - | 141 | Protein_2500 | recombination protein NinG | - |
| PWA52_RS12755 () | 2616417..2617016 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| PWA52_RS12760 () | 2617080..2617298 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| PWA52_RS12765 () | 2617600..2617698 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| PWA52_RS12770 () | 2618017..2619995 | - | 1979 | Protein_2504 | alkyl sulfatase dimerization domain-containing protein | - |
| PWA52_RS12775 () | 2620392..2621522 | + | 1131 | WP_000529511.1 | GGDEF domain-containing protein | - |
| PWA52_RS12780 () | 2621809..2622204 | - | 396 | WP_000089416.1 | DUF977 family protein | - |
| PWA52_RS12785 () | 2622217..2622759 | - | 543 | WP_158000546.1 | replication protein P | - |
| PWA52_RS12790 () | 2622671..2623669 | - | 999 | WP_000729536.1 | DUF1376 domain-containing protein | - |
| PWA52_RS12795 () | 2623716..2624210 | - | 495 | WP_001574210.1 | toxin YdaT family protein | - |
| PWA52_RS12800 () | 2624197..2624451 | - | 255 | WP_001033912.1 | helix-turn-helix transcriptional regulator | - |
| PWA52_RS12805 () | 2624550..2624948 | + | 399 | WP_001574209.1 | helix-turn-helix domain-containing protein | - |
| PWA52_RS12810 () | 2625390..2625620 | - | 231 | WP_158001424.1 | hypothetical protein | - |
| PWA52_RS12815 () | 2625955..2626230 | + | 276 | WP_000103933.1 | hypothetical protein | - |
| PWA52_RS12820 () | 2626234..2626440 | + | 207 | WP_000682660.1 | cell division inhibitor protein | - |
| PWA52_RS12825 () | 2626516..2626851 | + | 336 | WP_000799627.1 | hypothetical protein | - |
| PWA52_RS12830 () | 2626992..2629682 | + | 2691 | WP_000023717.1 | exodeoxyribonuclease VIII | - |
| PWA52_RS12835 () | 2629675..2630505 | + | 831 | WP_001126031.1 | recombination protein RecT | - |
| PWA52_RS12840 () | 2630552..2630737 | + | 186 | WP_000280163.1 | DUF1187 family protein | - |
| PWA52_RS12845 () | 2630836..2631264 | + | 429 | WP_000743301.1 | hypothetical protein | - |
| PWA52_RS12850 () | 2631325..2631603 | + | 279 | WP_001575998.1 | excisionase | - |
| PWA52_RS12855 () | 2631578..2632657 | + | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| PWA52_RS12860 () | 2633040..2633393 | - | 354 | WP_000722370.1 | YebY family protein | - |
| PWA52_RS12865 () | 2633410..2634285 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| PWA52_RS12870 () | 2634286..2634660 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| PWA52_RS12875 () | 2634798..2635028 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| PWA52_RS12880 () | 2635136..2635792 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| PWA52_RS12885 () | 2635816..2636514 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| PWA52_RS12890 () | 2636551..2638599 | - | 2049 | WP_001746673.1 | oligopeptidase B | - |
| PWA52_RS12895 () | 2638812..2639471 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| PWA52_RS12900 () | 2639565..2639918 | - | 354 | WP_001042123.1 | protein YebF | - |
| PWA52_RS12905 () | 2639986..2640276 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| PWA52_RS12910 () | 2640407..2641585 | + | 1179 | WP_000173422.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PWA52_RS12915 () | 2641685..2642326 | - | 642 | WP_079786856.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| - | 2632797..2632900 | - | 104 | - | - | Toxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|