MGE detailed information
MGE type: Prophage MGE length: 47286 bp
Accession: NZ_CP118539 Location: 1305083..1352368 Organism: Xylella fastidiosa strain ICMP 15197 Replicon: chromosome
Accession: NZ_CP118539 Location: 1305083..1352368 Organism: Xylella fastidiosa strain ICMP 15197 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PXH81_RS05915 (PXH81_05915) | 1300411..1301196 | + | 786 | WP_004087362.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| PXH81_RS05920 (PXH81_05920) | 1301233..1303839 | - | 2607 | WP_004087363.1 | DNA mismatch repair protein MutS | - |
| PXH81_RS05925 (PXH81_05925) | 1304272..1305003 | - | 732 | WP_012382616.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| PXH81_RS05930 (PXH81_05930) | 1305083..1305943 | + | 861 | WP_004087365.1 | Hsp33 family molecular chaperone HslO | - |
| PXH81_RS05935 (PXH81_05935) | 1306097..1306966 | + | 870 | WP_014607779.1 | hypothetical protein | - |
| PXH81_RS05945 (PXH81_05945) | 1307739..1308083 | - | 345 | WP_004084923.1 | RidA family protein | - |
| PXH81_RS05950 (PXH81_05950) | 1308286..1308561 | - | 276 | WP_228446138.1 | helix-turn-helix domain-containing protein | - |
| PXH81_RS05955 (PXH81_05955) | 1308810..1309892 | - | 1083 | WP_274849799.1 | phage late control D family protein | - |
| PXH81_RS05960 (PXH81_05960) | 1309883..1310101 | - | 219 | WP_004088371.1 | tail protein X | - |
| PXH81_RS05965 (PXH81_05965) | 1310098..1310580 | - | 483 | WP_011097928.1 | phage tail protein | - |
| PXH81_RS05970 (PXH81_05970) | 1310577..1312832 | - | 2256 | WP_248700160.1 | phage tail tape measure protein | - |
| PXH81_RS05975 (PXH81_05975) | 1312923..1313210 | - | 288 | WP_011097930.1 | phage tail assembly protein | - |
| PXH81_RS05980 (PXH81_05980) | 1313213..1313722 | - | 510 | WP_004086986.1 | phage major tail tube protein | - |
| PXH81_RS05985 (PXH81_05985) | 1313722..1314900 | - | 1179 | WP_011097931.1 | phage tail sheath family protein | - |
| PXH81_RS05990 (PXH81_05990) | 1314965..1316557 | - | 1593 | WP_012382617.1 | tail fiber domain-containing protein | - |
| PXH81_RS05995 (PXH81_05995) | 1316565..1317122 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| PXH81_RS06000 (PXH81_06000) | 1317115..1318008 | - | 894 | WP_274265311.1 | baseplate J/gp47 family protein | - |
| PXH81_RS06005 (PXH81_06005) | 1318008..1318370 | - | 363 | WP_014607615.1 | GPW/gp25 family protein | - |
| PXH81_RS06010 (PXH81_06010) | 1318496..1318759 | + | 264 | WP_004090907.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| PXH81_RS06015 (PXH81_06015) | 1318746..1319027 | + | 282 | WP_004090909.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| PXH81_RS06020 (PXH81_06020) | 1319064..1319651 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| PXH81_RS06025 (PXH81_06025) | 1319648..1320190 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| PXH81_RS06030 (PXH81_06030) | 1320166..1320687 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| PXH81_RS06035 (PXH81_06035) | 1320684..1321007 | - | 324 | WP_011097935.1 | hypothetical protein | - |
| PXH81_RS06040 (PXH81_06040) | 1321007..1321267 | - | 261 | WP_011097616.1 | hypothetical protein | - |
| PXH81_RS06045 (PXH81_06045) | 1321285..1323159 | - | 1875 | WP_038232803.1 | phage major capsid protein | - |
| PXH81_RS06050 (PXH81_06050) | 1323143..1324741 | - | 1599 | WP_038233038.1 | phage portal protein | - |
| PXH81_RS06055 (PXH81_06055) | 1324738..1325289 | - | 552 | WP_038233040.1 | hypothetical protein | - |
| PXH81_RS06060 (PXH81_06060) | 1325293..1327245 | - | 1953 | WP_128712497.1 | phage terminase large subunit family protein | - |
| PXH81_RS06065 (PXH81_06065) | 1327238..1327771 | - | 534 | WP_050765457.1 | terminase small subunit | - |
| PXH81_RS06070 (PXH81_06070) | 1327944..1328168 | - | 225 | WP_160176388.1 | hypothetical protein | - |
| PXH81_RS06075 (PXH81_06075) | 1328170..1328631 | - | 462 | WP_011097939.1 | hypothetical protein | - |
| PXH81_RS06080 (PXH81_06080) | 1328621..1328950 | - | 330 | WP_004086884.1 | phage holin family protein | - |
| PXH81_RS06085 (PXH81_06085) | 1328943..1329437 | - | 495 | WP_011097941.1 | lysozyme | - |
| PXH81_RS06090 (PXH81_06090) | 1329404..1330021 | - | 618 | WP_014607783.1 | hypothetical protein | - |
| PXH81_RS06095 (PXH81_06095) | 1330435..1332963 | - | 2529 | WP_128712484.1 | phage/plasmid primase, P4 family | - |
| PXH81_RS06100 (PXH81_06100) | 1333099..1333692 | - | 594 | WP_128712483.1 | BRO family protein | - |
| PXH81_RS06105 (PXH81_06105) | 1333689..1334078 | - | 390 | WP_128712482.1 | phage antirepressor protein | - |
| PXH81_RS06110 (PXH81_06110) | 1334075..1334458 | - | 384 | WP_061278107.1 | hypothetical protein | - |
| PXH81_RS06115 (PXH81_06115) | 1334455..1334838 | - | 384 | WP_206614042.1 | hypothetical protein | - |
| PXH81_RS06120 (PXH81_06120) | 1334835..1335785 | - | 951 | WP_243857840.1 | hypothetical protein | - |
| PXH81_RS06125 (PXH81_06125) | 1335803..1336018 | - | 216 | WP_241547155.1 | hypothetical protein | - |
| PXH81_RS06130 (PXH81_06130) | 1336048..1336236 | - | 189 | WP_004085135.1 | hypothetical protein | - |
| PXH81_RS06135 (PXH81_06135) | 1336290..1336514 | - | 225 | WP_174856288.1 | hypothetical protein | - |
| PXH81_RS06140 (PXH81_06140) | 1336918..1337178 | - | 261 | WP_012382631.1 | YdaS family helix-turn-helix protein | - |
| PXH81_RS06145 (PXH81_06145) | 1337264..1338022 | + | 759 | WP_011097952.1 | helix-turn-helix transcriptional regulator | - |
| PXH81_RS06150 (PXH81_06150) | 1338195..1338722 | + | 528 | WP_237390848.1 | hypothetical protein | - |
| PXH81_RS06155 (PXH81_06155) | 1338745..1338954 | + | 210 | WP_012382632.1 | hypothetical protein | - |
| PXH81_RS06160 (PXH81_06160) | 1338951..1339391 | + | 441 | WP_011097954.1 | hypothetical protein | - |
| PXH81_RS06165 (PXH81_06165) | 1339617..1340150 | + | 534 | WP_071869852.1 | hypothetical protein | - |
| PXH81_RS06170 (PXH81_06170) | 1340147..1340662 | + | 516 | WP_071869851.1 | hypothetical protein | - |
| PXH81_RS06175 (PXH81_06175) | 1340659..1341120 | + | 462 | WP_072866385.1 | DUF1566 domain-containing protein | - |
| PXH81_RS06180 (PXH81_06180) | 1341180..1341770 | - | 591 | WP_225621683.1 | hypothetical protein | - |
| PXH81_RS06185 (PXH81_06185) | 1341962..1342153 | + | 192 | WP_012382634.1 | hypothetical protein | - |
| PXH81_RS06190 (PXH81_06190) | 1342177..1342368 | + | 192 | WP_038233160.1 | hypothetical protein | - |
| PXH81_RS06195 (PXH81_06195) | 1342400..1342597 | + | 198 | WP_004090711.1 | hypothetical protein | - |
| PXH81_RS06200 (PXH81_06200) | 1342650..1343102 | + | 453 | WP_004090713.1 | hypothetical protein | - |
| PXH81_RS06205 (PXH81_06205) | 1343099..1344376 | + | 1278 | WP_012382637.1 | DUF2800 domain-containing protein | - |
| PXH81_RS06210 (PXH81_06210) | 1344376..1344942 | + | 567 | WP_004090881.1 | DUF2815 family protein | - |
| PXH81_RS06215 (PXH81_06215) | 1345029..1346540 | + | 1512 | WP_011097960.1 | BRO family protein | - |
| PXH81_RS06220 (PXH81_06220) | 1346542..1348722 | + | 2181 | WP_011097961.1 | DNA polymerase | - |
| PXH81_RS06225 (PXH81_06225) | 1348719..1348997 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| PXH81_RS06230 (PXH81_06230) | 1348999..1349445 | - | 447 | WP_012382639.1 | DUF1640 domain-containing protein | - |
| PXH81_RS06235 (PXH81_06235) | 1349530..1350948 | + | 1419 | WP_038233072.1 | DEAD/DEAH box helicase | - |
| PXH81_RS06240 (PXH81_06240) | 1350945..1351109 | + | 165 | WP_012382640.1 | hypothetical protein | - |
| PXH81_RS06245 (PXH81_06245) | 1351102..1351359 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| PXH81_RS06250 (PXH81_06250) | 1351349..1352368 | + | 1020 | WP_011097966.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PXH81_RS06255 (PXH81_06255) | 1352732..1355323 | + | 2592 | WP_004087286.1 | bifunctional lysylphosphatidylglycerol flippase/synthetase MprF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|