MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 84390 bp
Accession: NZ_CP118538 Location: 1..84390 Organism: Salmonella enterica subsp. enterica serovar Typhi strain S3 Replicon: plasmid p84390bp
Accession: NZ_CP118538 Location: 1..84390 Organism: Salmonella enterica subsp. enterica serovar Typhi strain S3 Replicon: plasmid p84390bp
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O1A30_RS23690 (O1A30_23690) | 1..861 | + | 861 | WP_021546926.1 | replication protein RepA | - |
| O1A30_RS23695 (O1A30_23695) | 1261..2466 | + | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| O1A30_RS23700 (O1A30_23700) | 2463..3428 | + | 966 | WP_000725192.1 | ParB family protein | - |
| O1A30_RS23705 (O1A30_23705) | 3693..3917 | + | 225 | WP_094653748.1 | IS6 family transposase IS15 | Transposase |
| O1A30_RS23710 (O1A30_23710) | 3929..4633 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| O1A30_RS23715 (O1A30_23715) | 4685..6451 | + | 1767 | Protein_5 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| O1A30_RS23720 (O1A30_23720) | 6530..7534 | + | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| O1A30_RS23725 (O1A30_23725) | 7806..7892 | - | 87 | Protein_7 | Arm DNA-binding domain-containing protein | - |
| O1A30_RS23730 (O1A30_23730) | 8222..9037 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| O1A30_RS23735 (O1A30_23735) | 9098..9901 | + | 804 | WP_024261901.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| O1A30_RS23740 (O1A30_23740) | 9901..10737 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| O1A30_RS23745 (O1A30_23745) | 10844..11248 | - | 405 | Protein_11 | IS91 family transposase ISPps1 | Transposase |
| O1A30_RS23750 (O1A30_23750) | 11458..12318 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| O1A30_RS23755 (O1A30_23755) | 12501..13058 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| O1A30_RS23760 (O1A30_23760) | 13222..13440 | + | 219 | WP_001143771.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| O1A30_RS23765 (O1A30_23765) | 13622..14884 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| O1A30_RS23770 (O1A30_23770) | 15140..16015 | + | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| O1A30_RS23775 (O1A30_23775) | 16062..16394 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| O1A30_RS23780 (O1A30_23780) | 16420..19203 | + | 2784 | Protein_18 | Tn3 family transposase TnpA_Tn3 | Transposase |
| O1A30_RS23785 (O1A30_23785) | 19246..20261 | - | 1016 | Protein_19 | IS3 family transposase ISEc36 | Transposase |
| O1A30_RS23790 (O1A30_23790) | 20656..21312 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| O1A30_RS23795 (O1A30_23795) | 21631..22059 | - | 429 | Protein_21 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| O1A30_RS23800 (O1A30_23800) | 22092..23483 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| O1A30_RS23805 (O1A30_23805) | 23520..24092 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| O1A30_RS23810 (O1A30_23810) | 24229..24774 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| O1A30_RS23815 (O1A30_23815) | 24909..25070 | - | 162 | Protein_25 | type II toxin-antitoxin system mRNA interferase RelE | - |
| O1A30_RS23820 (O1A30_23820) | 25070..25309 | - | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | - |
| O1A30_RS23825 (O1A30_23825) | 25334..25438 | + | 105 | Protein_27 | protein YdfV | - |
| O1A30_RS23830 (O1A30_23830) | 25690..27687 | + | 1998 | WP_005032116.1 | choline BCCT transporter BetT | - |
| O1A30_RS23835 (O1A30_23835) | 27751..29028 | + | 1278 | WP_000625667.1 | DUF2254 domain-containing protein | - |
| O1A30_RS23840 (O1A30_23840) | 29242..29987 | + | 746 | Protein_30 | hypothetical protein | - |
| O1A30_RS23845 (O1A30_23845) | 30275..30979 | + | 705 | WP_001067852.1 | IS6 family transposase IS26 | Transposase |
| O1A30_RS23850 (O1A30_23850) | 31034..32584 | + | 1551 | Protein_32 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| O1A30_RS23855 (O1A30_23855) | 32837..33073 | - | 237 | WP_223417154.1 | transposase | - |
| O1A30_RS23860 (O1A30_23860) | 33168..33380 | - | 213 | Protein_34 | 3'-5' exonuclease | - |
| O1A30_RS23865 (O1A30_23865) | 33426..33704 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| O1A30_RS23870 (O1A30_23870) | 33704..33973 | - | 270 | WP_021546940.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| O1A30_RS23875 (O1A30_23875) | 34720..35331 | + | 612 | Protein_37 | IS3 family transposase ISRaq1 | Transposase |
| O1A30_RS23880 (O1A30_23880) | 35363..35542 | - | 180 | WP_012600012.1 | hypothetical protein | - |
| O1A30_RS23885 (O1A30_23885) | 35766..36083 | + | 318 | WP_032156934.1 | hypothetical protein | - |
| O1A30_RS23890 (O1A30_23890) | 36152..37078 | + | 927 | WP_000617209.1 | WYL domain-containing protein | - |
| O1A30_RS23895 (O1A30_23895) | 37088..37687 | + | 600 | WP_001021938.1 | DUF1819 family protein | - |
| O1A30_RS23900 (O1A30_23900) | 37684..38268 | + | 585 | WP_000645940.1 | DUF1788 domain-containing protein | - |
| O1A30_RS23905 (O1A30_23905) | 38287..41964 | + | 3678 | WP_000687847.1 | BREX system P-loop protein BrxC | - |
| O1A30_RS23910 (O1A30_23910) | 41981..43744 | + | 1764 | WP_021546938.1 | DUF262 domain-containing protein | - |
| O1A30_RS23915 (O1A30_23915) | 43760..47389 | + | 3630 | WP_274844512.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| O1A30_RS23920 (O1A30_23920) | 47389..50046 | + | 2658 | WP_004011547.1 | BREX-1 system phosphatase PglZ type A | - |
| O1A30_RS23925 (O1A30_23925) | 50108..52153 | + | 2046 | WP_048659818.1 | protease Lon-related BREX system protein BrxL | - |
| O1A30_RS23930 (O1A30_23930) | 52261..52539 | - | 279 | Protein_48 | IS3 family transposase | - |
| O1A30_RS23935 (O1A30_23935) | 52829..53833 | - | 1005 | WP_021546935.1 | IS110 family transposase IS4321R | Transposase |
| O1A30_RS23940 (O1A30_23940) | 54138..54835 | + | 698 | WP_224656898.1 | IS1 family transposase | - |
| O1A30_RS23945 (O1A30_23945) | 54960..55394 | - | 435 | Protein_51 | GNAT family N-acetyltransferase | - |
| O1A30_RS23950 (O1A30_23950) | 55414..55659 | + | 246 | Protein_52 | IS3 family transposase ISEhe3 | Transposase |
| O1A30_RS23955 (O1A30_23955) | 55729..56433 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| O1A30_RS23960 (O1A30_23960) | 56494..57312 | + | 819 | Protein_54 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| O1A30_RS23965 (O1A30_23965) | 57658..58635 | - | 978 | WP_000600827.1 | IS91 family transposase ISWz1 | Transposase |
| O1A30_RS23975 (O1A30_23975) | 59715..60368 | - | 654 | WP_225368064.1 | hypothetical protein | - |
| O1A30_RS23980 (O1A30_23980) | 60372..61286 | - | 915 | WP_000891983.1 | helix-turn-helix domain-containing protein | - |
| O1A30_RS23985 (O1A30_23985) | 61600..61908 | + | 309 | WP_000062770.1 | hypothetical protein | - |
| O1A30_RS23990 (O1A30_23990) | 61901..62116 | + | 216 | WP_001112907.1 | hypothetical protein | - |
| O1A30_RS23995 (O1A30_23995) | 62119..62781 | + | 663 | WP_000958205.1 | Type IV secretion system protein virB1 | VF |
| O1A30_RS24000 (O1A30_24000) | 62792..63091 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| O1A30_RS24005 (O1A30_24005) | 63101..65851 | + | 2751 | WP_048659795.1 | Type IV secretion system protein virB4 | VF |
| O1A30_RS24010 (O1A30_24010) | 65870..66586 | + | 717 | WP_000770034.1 | type IV secretion system protein | - |
| O1A30_RS24015 (O1A30_24015) | 66598..66882 | + | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| O1A30_RS24020 (O1A30_24020) | 66900..67907 | + | 1008 | WP_000014166.1 | type IV secretion system protein | - |
| O1A30_RS24025 (O1A30_24025) | 67984..68124 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| O1A30_RS24030 (O1A30_24030) | 68117..68803 | + | 687 | WP_001293055.1 | type IV secretion system protein | - |
| O1A30_RS24035 (O1A30_24035) | 68796..69689 | + | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| O1A30_RS24040 (O1A30_24040) | 69686..70882 | + | 1197 | WP_000980841.1 | Type IV secretion system protein virB10 | VF |
| O1A30_RS24045 (O1A30_24045) | 70886..71935 | + | 1050 | WP_000342114.1 | Type IV secretion system protein VirB11 | VF |
| O1A30_RS24050 (O1A30_24050) | 71922..72323 | + | 402 | WP_000979494.1 | cag pathogenicity island Cag12 family protein | - |
| O1A30_RS24055 (O1A30_24055) | 72414..72731 | + | 318 | WP_000683352.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| O1A30_RS24060 (O1A30_24060) | 72758..73093 | + | 336 | WP_000610141.1 | hypothetical protein | - |
| O1A30_RS24065 (O1A30_24065) | 73069..73377 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| O1A30_RS24070 (O1A30_24070) | 73374..75575 | + | 2202 | WP_023281073.1 | type IA DNA topoisomerase | - |
| O1A30_RS24075 (O1A30_24075) | 75572..75964 | + | 393 | WP_001079960.1 | H-NS family nucleoid-associated regulatory protein | - |
| O1A30_RS24080 (O1A30_24080) | 76565..78472 | + | 1908 | WP_033546593.1 | type IV secretion system DNA-binding domain-containing protein | - |
| O1A30_RS24085 (O1A30_24085) | 78487..79233 | + | 747 | WP_000909125.1 | MobC family replication-relaxation protein | - |
| O1A30_RS24090 (O1A30_24090) | 79226..79753 | + | 528 | WP_048659789.1 | Phospholipase D | VF |
| O1A30_RS24095 (O1A30_24095) | 79785..80216 | - | 432 | WP_001776120.1 | hypothetical protein | - |
| O1A30_RS24100 (O1A30_24100) | 80348..80524 | - | 177 | WP_013438824.1 | hypothetical protein | - |
| O1A30_RS24105 (O1A30_24105) | 80696..81661 | - | 966 | WP_023281075.1 | zincin-like metallopeptidase domain-containing protein | - |
| O1A30_RS24110 (O1A30_24110) | 82113..82223 | + | 111 | Protein_84 | peptidase | - |
| O1A30_RS24115 (O1A30_24115) | 82340..82528 | + | 189 | WP_048230572.1 | hypothetical protein | - |
| O1A30_RS24120 (O1A30_24120) | 82538..83737 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|