MGE detailed information
MGE type: Genomic_island MGE length: 15466 bp
Accession: NZ_CP118537 Location: 843247..858712 Organism: Salmonella enterica subsp. enterica serovar Typhi strain S3 Replicon: chromosome
Accession: NZ_CP118537 Location: 843247..858712 Organism: Salmonella enterica subsp. enterica serovar Typhi strain S3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O1A30_RS04120 (O1A30_04120) | 839791..840336 | - | 546 | WP_000133998.1 | isopentenyl-diphosphate Delta-isomerase | - |
| O1A30_RS04125 (O1A30_04125) | 840601..841359 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| O1A30_RS04135 (O1A30_04135) | 841647..843254 | + | 1608 | WP_274844482.1 | site-specific integrase | - |
| O1A30_RS04140 (O1A30_04140) | 843259..843459 | + | 201 | Protein_810 | hypothetical protein | - |
| O1A30_RS04145 (O1A30_04145) | 845191..845676 | + | 486 | WP_000082606.1 | hypothetical protein | - |
| O1A30_RS04150 (O1A30_04150) | 845679..845876 | + | 198 | WP_001240756.1 | hypothetical protein | - |
| O1A30_RS04155 (O1A30_04155) | 845999..846490 | + | 492 | WP_044790498.1 | hypothetical protein | - |
| O1A30_RS04160 (O1A30_04160) | 846572..847561 | + | 990 | WP_274844510.1 | hypothetical protein | - |
| O1A30_RS04165 (O1A30_04165) | 848133..848939 | - | 807 | WP_077905073.1 | DUF1460 domain-containing protein | - |
| O1A30_RS04170 (O1A30_04170) | 849214..849465 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| O1A30_RS04175 (O1A30_04175) | 849642..849869 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| O1A30_RS04180 (O1A30_04180) | 849869..850267 | + | 399 | WP_000911334.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| O1A30_RS04185 (O1A30_04185) | 851074..851610 | + | 537 | WP_001038500.1 | Attachment invasion locus protein | VF |
| O1A30_RS04190 (O1A30_04190) | 851657..852289 | + | 633 | WP_000835268.1 | YfdX family protein | - |
| O1A30_RS04195 (O1A30_04195) | 853008..853589 | + | 582 | WP_001244646.1 | putative fimbrial-like protein YbgD | VF |
| O1A30_RS04200 (O1A30_04200) | 853709..856198 | + | 2490 | WP_000705516.1 | Outer membrane usher protein PapC | VF |
| O1A30_RS04205 (O1A30_04205) | 856239..856982 | + | 744 | WP_000798497.1 | Chaperone protein PapD | VF |
| O1A30_RS04210 (O1A30_04210) | 856979..858055 | + | 1077 | WP_000141334.1 | hypothetical protein | - |
| O1A30_RS04215 (O1A30_04215) | 858200..858712 | + | 513 | WP_000336256.1 | CaiF/GrlA family transcriptional regulator | - |
| O1A30_RS04220 (O1A30_04220) | 858699..859457 | + | 759 | WP_000134788.1 | transcriptional regulator | - |
| O1A30_RS04225 (O1A30_04225) | 859667..860539 | - | 873 | Protein_827 | nickel/cobalt efflux protein RcnA | - |
| O1A30_RS04230 (O1A30_04230) | 860661..860933 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| O1A30_RS04235 (O1A30_04235) | 860964..862193 | - | 1230 | WP_000036836.1 | amino acid permease | - |
| O1A30_RS04240 (O1A30_04240) | 862335..862790 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|