NZ_CP1185374145433..4278242

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 132810 bp
Accession: NZ_CP118537        Location: 4145433..4278242         Organism: Salmonella enterica subsp. enterica serovar Typhi strain S3       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
O1A30_RS20390 (O1A30_20390) 4141232..4142533 + 1302 WP_000637594.1 anaerobic C4-dicarboxylate transporter DcuA -
O1A30_RS20395 (O1A30_20395) 4142654..4143001 + 348 WP_000887832.1 divalent cation tolerance protein CutA -
O1A30_RS20400 (O1A30_20400) 4142977..4144680 + 1704 WP_000068881.1 protein-disulfide reductase DsbD -
O1A30_RS20405 (O1A30_20405) 4144717..4145292 + 576 WP_001188506.1 transcriptional regulator -
O1A30_RS20415 (O1A30_20415) 4145643..4146902 + 1260 WP_000954536.1 Prophage integrase IntS ; Integrase Integrase
O1A30_RS20420 (O1A30_20420) 4147213..4148403 + 1191 WP_000975155.1 SH3 domain-containing protein -
O1A30_RS20425 (O1A30_20425) 4148488..4148757 + 270 Protein_4001 integrase -
O1A30_RS20430 (O1A30_20430) 4149384..4150166 - 783 WP_000511749.1 hypothetical protein ; Integrase Integrase
O1A30_RS20435 (O1A30_20435) 4150436..4150630 + 195 WP_162009227.1 hypothetical protein -
O1A30_RS20440 (O1A30_20440) 4151023..4151244 - 222 WP_000193665.1 helix-turn-helix transcriptional regulator -
O1A30_RS20445 (O1A30_20445) 4151241..4151702 - 462 WP_000246267.1 hypothetical protein -
O1A30_RS20450 (O1A30_20450) 4152249..4153922 + 1674 WP_010989301.1 hypothetical protein -
O1A30_RS20455 (O1A30_20455) 4154003..4156288 + 2286 WP_010989300.1 hypothetical protein -
O1A30_RS20460 (O1A30_20460) 4156592..4156843 + 252 WP_024131240.1 hypothetical protein -
O1A30_RS20465 (O1A30_20465) 4156925..4157377 + 453 WP_000434168.1 hypothetical protein -
O1A30_RS20470 (O1A30_20470) 4157557..4158045 - 489 WP_000622308.1 GNAT family N-acetyltransferase Toxin Detail
O1A30_RS20475 (O1A30_20475) 4158042..4158335 - 294 WP_001143724.1 DUF1778 domain-containing protein Antitoxin Detail
O1A30_RS20480 (O1A30_20480) 4158762..4159775 - 1014 WP_000449622.1 Tyrosine recombinase XerC ; Integrase Integrase
O1A30_RS20485 (O1A30_20485) 4159939..4161528 - 1590 WP_000488995.1 TraI domain-containing protein -
O1A30_RS20490 (O1A30_20490) 4161512..4163023 - 1512 WP_001120833.1 UvrD-helicase domain-containing protein -
O1A30_RS20495 (O1A30_20495) 4163877..4164416 + 540 WP_001210944.1 Vi polysaccharide biosynthesis regulator TviA -
O1A30_RS20500 (O1A30_20500) 4164661..4165938 + 1278 WP_000466893.1 UDP-N-acetyl-D-glucosamine 6-dehydrogenase VF
O1A30_RS20505 (O1A30_20505) 4165941..4166987 + 1047 WP_000127915.1 UDP-N-acetylglucosamine 4-epimerase VF
O1A30_RS20510 (O1A30_20510) 4167011..4169506 + 2496 WP_010989299.1 hypothetical protein VF
O1A30_RS20515 (O1A30_20515) 4169506..4171242 + 1737 WP_000632616.1 hypothetical protein VF
O1A30_RS20520 (O1A30_20520) 4171287..4172354 + 1068 WP_000720235.1 hypothetical protein VF
O1A30_RS20525 (O1A30_20525) 4172364..4173158 + 795 WP_001023498.1 hypothetical protein VF
O1A30_RS20530 (O1A30_20530) 4173184..4173879 + 696 WP_000467404.1 Polysialic acid transport ATP-binding protein KpsT VF
O1A30_RS20535 (O1A30_20535) 4173902..4175206 + 1305 WP_000431675.1 hypothetical protein VF
O1A30_RS20540 (O1A30_20540) 4175226..4177196 + 1971 WP_000052242.1 hypothetical protein VF
O1A30_RS20545 (O1A30_20545) 4177498..4178244 - 747 WP_000354257.1 class I SAM-dependent methyltransferase -
O1A30_RS20550 (O1A30_20550) 4178244..4179134 - 891 WP_001681808.1 class I SAM-dependent methyltransferase -
O1A30_RS20555 (O1A30_20555) 4179145..4179402 - 258 WP_001681810.1 YjhX family toxin -
O1A30_RS20560 (O1A30_20560) 4179704..4179814 - 111 Protein_4028 autoinducer 2 ABC transporter substrate-binding protein -
O1A30_RS20565 (O1A30_20565) 4180049..4180393 + 345 Protein_4029 translesion error-prone DNA polymerase V autoproteolytic subunit -
O1A30_RS20570 (O1A30_20570) 4180509..4181534 - 1026 WP_000027757.1 Tyrosine recombinase XerC ; Integrase Integrase
O1A30_RS20575 (O1A30_20575) 4181538..4182170 - 633 WP_000052560.1 helix-turn-helix domain-containing protein -
O1A30_RS20580 (O1A30_20580) 4182287..4182529 + 243 WP_000102106.1 Rha family transcriptional regulator -
O1A30_RS20585 (O1A30_20585) 4182562..4183071 + 510 WP_000460852.1 phage regulatory CII family protein -
O1A30_RS20590 (O1A30_20590) 4183079..4183279 + 201 WP_000956167.1 DUF2724 domain-containing protein -
O1A30_RS20595 (O1A30_20595) 4183243..4183584 + 342 WP_000963479.1 DUF5347 family protein -
O1A30_RS20600 (O1A30_20600) 4183652..4183885 + 234 WP_001244240.1 DUF2732 family protein -
O1A30_RS20605 (O1A30_20605) 4183885..4184112 + 228 WP_000785510.1 TraR/DksA family transcriptional regulator -
O1A30_RS20610 (O1A30_20610) 4184109..4184693 + 585 WP_001090717.1 exonuclease domain-containing protein -
O1A30_RS20615 (O1A30_20615) 4184690..4185550 + 861 WP_000104130.1 DNA adenine methylase -
O1A30_RS20620 (O1A30_20620) 4185541..4187936 + 2396 Protein_4040 replication endonuclease -
O1A30_RS20625 (O1A30_20625) 4188104..4188292 + 189 WP_001154438.1 hypothetical protein -
O1A30_RS20630 (O1A30_20630) 4188304..4188537 + 234 WP_001217561.1 DinI family protein -
O1A30_RS20635 (O1A30_20635) 4188633..4188851 + 219 WP_000835188.1 hypothetical protein -
O1A30_RS20640 (O1A30_20640) 4188861..4189925 + 1065 WP_000829584.1 hypothetical protein -
O1A30_RS20645 (O1A30_20645) 4189922..4190986 + 1065 WP_000789323.1 hypothetical protein -
O1A30_RS20650 (O1A30_20650) 4191006..4191701 + 696 WP_000080839.1 hypothetical protein -
O1A30_RS20655 (O1A30_20655) 4191750..4192793 - 1044 WP_001681813.1 phage portal protein -
O1A30_RS20660 (O1A30_20660) 4192793..4194559 - 1767 WP_001098453.1 terminase ATPase subunit family protein -
O1A30_RS20665 (O1A30_20665) 4194702..4195535 + 834 WP_000216272.1 GPO family capsid scaffolding protein -
O1A30_RS20670 (O1A30_20670) 4195552..4196616 + 1065 WP_000730751.1 phage major capsid protein, P2 family -
O1A30_RS20675 (O1A30_20675) 4196620..4197270 + 651 WP_000059175.1 terminase endonuclease subunit -
O1A30_RS20680 (O1A30_20680) 4197364..4197828 + 465 WP_000673540.1 head completion/stabilization protein -
O1A30_RS20685 (O1A30_20685) 4197828..4198031 + 204 WP_000868184.1 tail protein X -
O1A30_RS20690 (O1A30_20690) 4198035..4198250 + 216 WP_000171566.1 HP1 family phage holin -
O1A30_RS20695 (O1A30_20695) 4198231..4198740 + 510 WP_001097942.1 lysozyme -
O1A30_RS20700 (O1A30_20700) 4198745..4199122 + 378 WP_000731034.1 DNZ54_00345 family protein -
O1A30_RS20705 (O1A30_20705) 4199119..4199547 + 429 WP_024131238.1 Rz-like lysis system protein LysB -
O1A30_RS20710 (O1A30_20710) 4199432..4199680 + 249 WP_223229656.1 Rz1-like lysis system protein LysC -
O1A30_RS20715 (O1A30_20715) 4199643..4200074 + 432 WP_001039966.1 phage tail protein -
O1A30_RS20720 (O1A30_20720) 4200067..4200513 + 447 WP_000343944.1 phage virion morphogenesis protein -
O1A30_RS20725 (O1A30_20725) 4200582..4201160 + 579 WP_000993749.1 phage baseplate assembly protein V -
O1A30_RS20730 (O1A30_20730) 4201157..4201516 + 360 WP_000177408.1 GPW/gp25 family protein -
O1A30_RS20735 (O1A30_20735) 4201503..4202411 + 909 WP_000268327.1 baseplate assembly protein -
O1A30_RS20740 (O1A30_20740) 4202404..4203009 + 606 WP_001086816.1 phage tail protein I -
O1A30_RS20745 (O1A30_20745) 4203006..4204625 + 1620 WP_000104806.1 phage tail protein -
O1A30_RS20750 (O1A30_20750) 4204632..4205039 + 408 WP_000006337.1 tail fiber assembly protein -
O1A30_RS20755 (O1A30_20755) 4205237..4205959 - 723 WP_000161708.1 Guanine nucleotide exchange factor SopE VF
O1A30_RS20760 (O1A30_20760) 4206170..4206391 + 222 Protein_4068 helix-turn-helix domain-containing protein -
O1A30_RS20765 (O1A30_20765) 4206494..4207666 + 1173 WP_000046101.1 phage tail sheath protein -
O1A30_RS20770 (O1A30_20770) 4207676..4208191 + 516 WP_001207653.1 phage major tail tube protein -
O1A30_RS20775 (O1A30_20775) 4208246..4208548 + 303 WP_001280965.1 phage tail assembly protein -
O1A30_RS20780 (O1A30_20780) 4208563..4208682 + 120 WP_000763315.1 GpE family phage tail protein -
O1A30_RS20785 (O1A30_20785) 4208675..4211455 + 2781 WP_001282813.1 phage tail tape measure protein -
O1A30_RS20790 (O1A30_20790) 4211455..4211940 + 486 WP_000980405.1 phage tail protein -
O1A30_RS20795 (O1A30_20795) 4211937..4213037 + 1101 WP_001011750.1 phage late control D family protein -
O1A30_RS20800 (O1A30_20800) 4213105..4213323 + 219 WP_001775272.1 ogr/Delta-like zinc finger family protein -
O1A30_RS20805 (O1A30_20805) 4213410..4213787 - 378 WP_001039750.1 hypothetical protein -
O1A30_RS20810 (O1A30_20810) 4213921..4214007 + 87 Protein_4078 peptidase -
O1A30_RS20815 (O1A30_20815) 4214007..4215281 + 1275 WP_000457555.1 Y-family DNA polymerase -
O1A30_RS20820 (O1A30_20820) 4215413..4215682 + 270 WP_001222413.1 hypothetical protein -
O1A30_RS20825 (O1A30_20825) 4215782..4216108 - 327 WP_000911568.1 DUF3085 domain-containing protein -
O1A30_RS20830 (O1A30_20830) 4216183..4217082 - 900 WP_000022216.1 hypothetical protein -
O1A30_RS20835 (O1A30_20835) 4217156..4218064 - 909 WP_000881183.1 hypothetical protein -
O1A30_RS20840 (O1A30_20840) 4218136..4220085 - 1950 WP_001097965.1 zincin-like metallopeptidase domain-containing protein -
O1A30_RS20845 (O1A30_20845) 4220174..4220632 - 459 WP_000115421.1 hypothetical protein -
O1A30_RS20850 (O1A30_20850) 4220710..4221006 - 297 WP_000968700.1 hypothetical protein -
O1A30_RS20855 (O1A30_20855) 4221003..4221455 - 453 WP_000979718.1 hypothetical protein -
O1A30_RS20860 (O1A30_20860) 4221473..4221682 - 210 WP_000018145.1 hypothetical protein -
O1A30_RS20865 (O1A30_20865) 4222053..4222433 - 381 WP_001103837.1 hypothetical protein -
O1A30_RS20870 (O1A30_20870) 4222529..4222831 - 303 WP_001020123.1 hypothetical protein -
O1A30_RS20875 (O1A30_20875) 4223555..4224475 - 921 WP_000907593.1 hypothetical protein ; Integrase Integrase
O1A30_RS20880 (O1A30_20880) 4225741..4226283 + 543 WP_010989295.1 DUF1062 domain-containing protein -
O1A30_RS20885 (O1A30_20885) 4226494..4227135 - 642 WP_000502502.1 ParB N-terminal domain-containing protein -
O1A30_RS20890 (O1A30_20890) 4227120..4228367 - 1248 WP_001283066.1 phosphoadenosine phosphosulfate reductase -
O1A30_RS20895 (O1A30_20895) 4228655..4229014 + 360 WP_010989293.1 hypothetical protein -
O1A30_RS20900 (O1A30_20900) 4229238..4229627 + 390 WP_000993574.1 hypothetical protein -
O1A30_RS20905 (O1A30_20905) 4229663..4231168 - 1506 WP_000213770.1 conjugal transfer protein TraG N-terminal domain-containing protein -
O1A30_RS20910 (O1A30_20910) 4231501..4232898 - 1398 WP_014341560.1 integrating conjugative element protein -
O1A30_RS20915 (O1A30_20915) 4232946..4233914 - 969 WP_000838927.1 TIGR03756 family integrating conjugative element protein -
O1A30_RS20920 (O1A30_20920) 4233911..4234303 - 393 WP_000821941.1 TIGR03757 family integrating conjugative element protein -
O1A30_RS20925 (O1A30_20925) 4234458..4234844 - 387 WP_000054770.1 hypothetical protein -
O1A30_RS20930 (O1A30_20930) 4234999..4237711 - 2713 Protein_4102 conjugative transfer ATPase -
O1A30_RS20935 (O1A30_20935) 4237834..4238283 - 450 WP_000244536.1 TIGR03751 family conjugal transfer lipoprotein -
O1A30_RS20940 (O1A30_20940) 4238270..4239748 - 1479 WP_001165842.1 TIGR03752 family integrating conjugative element protein -
O1A30_RS20945 (O1A30_20945) 4239738..4240637 - 900 WP_001240640.1 TIGR03749 family integrating conjugative element protein -
O1A30_RS20950 (O1A30_20950) 4240637..4241290 - 654 WP_000086082.1 TIGR03746 family integrating conjugative element protein -
O1A30_RS20955 (O1A30_20955) 4241287..4241661 - 375 WP_000848326.1 TIGR03750 family conjugal transfer protein -
O1A30_RS20960 (O1A30_20960) 4241671..4242036 - 366 WP_223228898.1 TIGR03745 family integrating conjugative element membrane protein -
O1A30_RS20965 (O1A30_20965) 4242063..4242296 - 234 WP_015899494.1 TIGR03758 family integrating conjugative element protein -
O1A30_RS20970 (O1A30_20970) 4242302..4242556 - 255 WP_000252871.1 RAQPRD family integrative conjugative element protein -
O1A30_RS20975 (O1A30_20975) 4242793..4243551 - 759 WP_010989289.1 TIGR03747 family integrating conjugative element membrane protein -
O1A30_RS20980 (O1A30_20980) 4243548..4245638 - 2091 WP_000071290.1 type IV conjugative transfer system coupling protein TraD -
O1A30_RS20985 (O1A30_20985) 4245658..4246227 - 570 WP_000626967.1 restriction endonuclease -
O1A30_RS20990 (O1A30_20990) 4246237..4246737 - 501 WP_000253629.1 integrating conjugative element protein -
O1A30_RS20995 (O1A30_20995) 4246773..4247459 - 687 WP_000013624.1 hypothetical protein VF
O1A30_RS21000 (O1A30_21000) 4247438..4248124 - 687 WP_223229647.1 TIGR03759 family integrating conjugative element protein -
O1A30_RS21005 (O1A30_21005) 4248197..4249111 - 915 WP_000214158.1 hypothetical protein -
O1A30_RS21010 (O1A30_21010) 4249068..4249430 - 363 WP_001149494.1 hypothetical protein -
O1A30_RS21015 (O1A30_21015) 4249618..4250493 - 876 WP_000994659.1 hypothetical protein -
O1A30_RS21020 (O1A30_21020) 4250705..4251172 - 468 WP_000455463.1 hypothetical protein -
O1A30_RS21025 (O1A30_21025) 4251269..4252420 - 1152 WP_000089603.1 Tyrosine recombinase XerC ; Integrase Integrase
O1A30_RS21030 (O1A30_21030) 4252768..4254075 - 1308 WP_000744276.1 hypothetical protein VF
O1A30_RS21035 (O1A30_21035) 4254072..4254734 - 663 WP_000218700.1 hypothetical protein VF
O1A30_RS21040 (O1A30_21040) 4254731..4255174 - 444 WP_223228896.1 hypothetical protein VF
O1A30_RS21045 (O1A30_21045) 4255217..4255813 - 597 WP_024131234.1 hypothetical protein VF
O1A30_RS21050 (O1A30_21050) 4255852..4256937 - 1086 WP_000074784.1 hypothetical protein VF
O1A30_RS21055 (O1A30_21055) 4256934..4258649 - 1716 WP_001289222.1 hypothetical protein VF
O1A30_RS21060 (O1A30_21060) 4258659..4259039 - 381 WP_014341558.1 hypothetical protein VF
O1A30_RS21065 (O1A30_21065) 4259227..4260513 - 1287 WP_000763621.1 hypothetical protein VF
O1A30_RS21070 (O1A30_21070) 4260515..4260853 - 339 WP_048657783.1 Outer membrane lipoprotein BfpB VF
O1A30_RS21075 (O1A30_21075) 4260819..4261754 - 936 WP_049783585.1 hypothetical protein VF
O1A30_RS21080 (O1A30_21080) 4262225..4262644 - 420 WP_000539682.1 hypothetical protein VF
O1A30_RS21085 (O1A30_21085) 4262647..4263891 - 1245 WP_001095932.1 hypothetical protein VF
O1A30_RS21090 (O1A30_21090) 4264056..4265006 - 951 Protein_4134 ISNCY family transposase ISPlu22 VF
O1A30_RS21095 (O1A30_21095) 4265072..4265608 - 537 WP_000157067.1 single-stranded DNA-binding protein -
O1A30_RS21100 (O1A30_21100) 4265621..4265839 - 219 WP_000958171.1 hypothetical protein -
O1A30_RS21105 (O1A30_21105) 4265920..4266369 - 450 WP_000032521.1 STY4534 family ICE replication protein -
O1A30_RS21110 (O1A30_21110) 4267037..4269031 - 1995 WP_001241572.1 DNA topoisomerase III -
O1A30_RS21115 (O1A30_21115) 4269142..4269918 - 777 WP_001290445.1 TIGR03761 family integrating conjugative element protein -
O1A30_RS21120 (O1A30_21120) 4270507..4271817 - 1311 WP_001194350.1 STY4528 family pathogenicity island replication protein -
O1A30_RS21125 (O1A30_21125) 4271847..4272095 - 249 WP_000377625.1 hypothetical protein -
O1A30_RS21130 (O1A30_21130) 4272095..4272652 - 558 WP_000144322.1 DUF2857 domain-containing protein -
O1A30_RS21135 (O1A30_21135) 4272737..4273459 - 723 WP_001275616.1 DUF2786 domain-containing protein -
O1A30_RS21140 (O1A30_21140) 4273446..4273706 - 261 WP_000838568.1 hypothetical protein -
O1A30_RS21145 (O1A30_21145) 4273920..4275719 - 1800 WP_001029724.1 ParB family protein -
O1A30_RS21150 (O1A30_21150) 4275712..4277076 - 1365 WP_000018529.1 SPI-7-type island replicative DNA helicase -
O1A30_RS21155 (O1A30_21155) 4277073..4278107 - 1035 WP_001195363.1 hypothetical protein VF
O1A30_RS21160 (O1A30_21160) 4278321..4278395 - 75 Protein_4148 helix-turn-helix domain-containing protein -
O1A30_RS21165 (O1A30_21165) 4278775..4278852 + 78 Protein_4149 porin family protein -
O1A30_RS21170 (O1A30_21170) 4278952..4279704 + 753 WP_001785756.1 non-specific acid phosphatase -
O1A30_RS21175 (O1A30_21175) 4279945..4280436 - 492 WP_000626103.1 GNAT family N-acetyltransferase -
O1A30_RS21180 (O1A30_21180) 4280433..4280726 - 294 WP_001110456.1 DUF1778 domain-containing protein -
O1A30_RS21185 (O1A30_21185) 4281043..4281265 + 223 Protein_4153 hypothetical protein -
O1A30_RS21190 (O1A30_21190) 4281531..4282406 + 876 WP_000921674.1 AraC family transcriptional regulator -
O1A30_RS21195 (O1A30_21195) 4282403..4282690 + 288 WP_001269916.1 transcriptional regulator RtsB -
O1A30_RS21200 (O1A30_21200) 4282713..4282929 + 217 Protein_4156 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance