MGE detailed information
MGE type: Prophage MGE length: 45557 bp
Accession: NZ_CP118537 Location: 2760462..2806018 Organism: Salmonella enterica subsp. enterica serovar Typhi strain S3 Replicon: chromosome
Accession: NZ_CP118537 Location: 2760462..2806018 Organism: Salmonella enterica subsp. enterica serovar Typhi strain S3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O1A30_RS13815 (O1A30_13815) | 2755900..2757272 | + | 1373 | Protein_2706 | MFS transporter | - |
| O1A30_RS13820 (O1A30_13820) | 2757320..2758201 | - | 882 | WP_000984498.1 | protease HtpX | - |
| O1A30_RS13825 (O1A30_13825) | 2758394..2760442 | - | 2049 | WP_001091235.1 | carboxy terminal-processing peptidase | - |
| O1A30_RS13830 (O1A30_13830) | 2760462..2761148 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| O1A30_RS13835 (O1A30_13835) | 2761246..2761743 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| O1A30_RS13840 (O1A30_13840) | 2761872..2763155 | + | 1284 | WP_001207300.1 | membrane integrity lipid transport subunit YebS | - |
| O1A30_RS13845 (O1A30_13845) | 2763124..2765757 | + | 2634 | WP_001521100.1 | Intermembrane transport protein YebT | VF |
| O1A30_RS13850 (O1A30_13850) | 2765835..2767274 | + | 1440 | WP_010989184.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| O1A30_RS13855 (O1A30_13855) | 2767392..2767628 | + | 237 | WP_024131167.1 | YebV family protein | - |
| O1A30_RS13860 (O1A30_13860) | 2767739..2767930 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| O1A30_RS13865 (O1A30_13865) | 2767949..2768599 | - | 651 | WP_000986169.1 | protein-serine/threonine phosphatase | - |
| O1A30_RS13870 (O1A30_13870) | 2768823..2768987 | - | 165 | WP_001134857.1 | hypothetical protein | - |
| O1A30_RS13875 (O1A30_13875) | 2769272..2769993 | - | 722 | Protein_2718 | Guanine nucleotide exchange factor sopE2 | VF |
| O1A30_RS13880 (O1A30_13880) | 2770677..2771072 | + | 396 | WP_000422884.1 | DUF1398 domain-containing protein | - |
| O1A30_RS13885 (O1A30_13885) | 2771401..2771877 | + | 477 | WP_000030950.1 | hypothetical protein | - |
| O1A30_RS13890 (O1A30_13890) | 2772265..2772684 | - | 420 | WP_000354403.1 | GNAT family N-acetyltransferase | - |
| O1A30_RS13895 (O1A30_13895) | 2773055..2773321 | + | 267 | WP_010989185.1 | hypothetical protein | - |
| O1A30_RS13900 (O1A30_13900) | 2773490..2773630 | + | 141 | WP_031624337.1 | hypothetical protein | - |
| O1A30_RS13905 (O1A30_13905) | 2773606..2774877 | - | 1272 | Protein_2724 | IS256 family transposase ISEc39 | Transposase |
| O1A30_RS13910 (O1A30_13910) | 2774947..2775368 | + | 422 | Protein_2725 | tyrosine-type recombinase/integrase | - |
| O1A30_RS13915 (O1A30_13915) | 2776667..2777581 | + | 915 | WP_001233444.1 | DMT family transporter | - |
| O1A30_RS13920 (O1A30_13920) | 2777714..2777872 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| O1A30_RS13925 (O1A30_13925) | 2777882..2778496 | + | 615 | WP_000848063.1 | disulfide bond formation protein B | - |
| O1A30_RS13930 (O1A30_13930) | 2778905..2780884 | - | 1980 | WP_001237518.1 | alkyl sulfatase dimerization domain-containing protein | - |
| O1A30_RS13935 (O1A30_13935) | 2781280..2782410 | + | 1131 | WP_000529513.1 | GGDEF domain-containing protein | - |
| O1A30_RS13940 (O1A30_13940) | 2782696..2783091 | - | 396 | Protein_2731 | DUF977 family protein | - |
| O1A30_RS13945 (O1A30_13945) | 2783104..2783214 | - | 111 | Protein_2732 | replication protein | - |
| O1A30_RS13950 (O1A30_13950) | 2783215..2783576 | + | 362 | Protein_2733 | recombinase RecT | - |
| O1A30_RS13955 (O1A30_13955) | 2783575..2783883 | + | 309 | Protein_2734 | hypothetical protein ; Integrase | Integrase |
| - | 2784002..2784145 | + | 144 | - | - | Antitoxin Detail |
| - | 2784004..2784106 | - | 103 | - | - | Toxin Detail |
| O1A30_RS13960 (O1A30_13960) | 2784247..2784600 | - | 354 | WP_000722366.1 | YebY family protein | - |
| O1A30_RS13965 (O1A30_13965) | 2784617..2785492 | - | 876 | WP_000979693.1 | copper homeostasis membrane protein CopD | - |
| O1A30_RS13970 (O1A30_13970) | 2785493..2785867 | - | 375 | WP_001681742.1 | CopC domain-containing protein YobA | - |
| O1A30_RS13975 (O1A30_13975) | 2786005..2786235 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| O1A30_RS13980 (O1A30_13980) | 2786343..2786999 | + | 657 | WP_000100250.1 | carbon-nitrogen hydrolase family protein | - |
| O1A30_RS13985 (O1A30_13985) | 2787023..2787721 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| O1A30_RS13990 (O1A30_13990) | 2787758..2789809 | - | 2052 | WP_000936997.1 | oligopeptidase B | - |
| O1A30_RS13995 (O1A30_13995) | 2790023..2790682 | - | 660 | WP_000024713.1 | tellurite resistance TerB family protein | - |
| O1A30_RS14000 (O1A30_14000) | 2790776..2791129 | - | 354 | WP_001042123.1 | protein YebF | - |
| O1A30_RS14005 (O1A30_14005) | 2791197..2791487 | - | 291 | WP_000257728.1 | DNA damage-inducible protein YebG | - |
| O1A30_RS14010 (O1A30_14010) | 2791618..2792796 | + | 1179 | WP_000173426.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| O1A30_RS14015 (O1A30_14015) | 2792896..2793537 | - | 642 | WP_000800493.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| O1A30_RS14020 (O1A30_14020) | 2793575..2795386 | - | 1812 | WP_001069124.1 | phosphogluconate dehydratase | - |
| O1A30_RS14025 (O1A30_14025) | 2795621..2797096 | - | 1476 | WP_000301712.1 | glucose-6-phosphate dehydrogenase | - |
| O1A30_RS14030 (O1A30_14030) | 2797438..2798307 | + | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| O1A30_RS14035 (O1A30_14035) | 2798431..2799873 | + | 1443 | WP_000091158.1 | pyruvate kinase | - |
| O1A30_RS14040 (O1A30_14040) | 2799946..2800917 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| O1A30_RS14045 (O1A30_14045) | 2801034..2802353 | - | 1320 | WP_001184019.1 | murein DD-endopeptidase MepM | - |
| O1A30_RS14050 (O1A30_14050) | 2802369..2803313 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| O1A30_RS14055 (O1A30_14055) | 2803392..2804147 | + | 756 | WP_000203015.1 | Zinc import ATP-binding protein ZnuC | VF |
| O1A30_RS14060 (O1A30_14060) | 2804144..2804929 | + | 786 | WP_000571518.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| O1A30_RS14065 (O1A30_14065) | 2805008..2806018 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| O1A30_RS14070 (O1A30_14070) | 2806027..2806638 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| O1A30_RS14075 (O1A30_14075) | 2806998..2807690 | - | 693 | WP_000227314.1 | hypothetical protein | - |
| O1A30_RS14080 (O1A30_14080) | 2807900..2808499 | + | 600 | WP_000716741.1 | YebB family permuted papain-like enzyme | - |
| O1A30_RS14085 (O1A30_14085) | 2808501..2809022 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| O1A30_RS14090 (O1A30_14090) | 2809059..2809799 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| O1A30_RS14095 (O1A30_14095) | 2809829..2810281 | - | 453 | WP_000653696.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|