MGE detailed information
MGE type: Genomic_island MGE length: 24021 bp
Accession: NZ_CP118269 Location: 3446999..3471019 Organism: Pantoea sp. Lij88 Replicon: chromosome
Accession: NZ_CP118269 Location: 3446999..3471019 Organism: Pantoea sp. Lij88 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PU624_RS19990 (PU624_19990) | 3442079..3442939 | + | 861 | WP_283546356.1 | ketose-bisphosphate aldolase | - |
| PU624_RS19995 (PU624_19995) | 3443067..3443342 | - | 276 | WP_283546357.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PU624_RS20000 (PU624_20000) | 3443346..3443594 | - | 249 | WP_283546358.1 | ribbon-helix-helix domain-containing protein | - |
| PU624_RS20005 (PU624_20005) | 3443900..3444718 | - | 819 | WP_283546359.1 | CDP-diacylglycerol diphosphatase | - |
| PU624_RS20010 (PU624_20010) | 3444899..3445771 | + | 873 | WP_283548039.1 | HNH endonuclease | - |
| PU624_RS20015 (PU624_20015) | 3446065..3446394 | - | 330 | Protein_3149 | endoribonuclease SymE | - |
| PU624_RS20020 (PU624_20020) | 3446569..3446830 | - | 262 | Protein_3150 | hypothetical protein | - |
| PU624_RS20025 (PU624_20025) | 3446999..3447946 | - | 948 | WP_283546360.1 | hypothetical protein | - |
| PU624_RS20030 (PU624_20030) | 3448988..3451021 | + | 2034 | WP_283546361.1 | hypothetical protein | - |
| PU624_RS20035 (PU624_20035) | 3451213..3451554 | - | 342 | WP_283546362.1 | TA system toxin CbtA family protein | Toxin Detail |
| PU624_RS20040 (PU624_20040) | 3451575..3451916 | - | 342 | WP_283546363.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PU624_RS20045 (PU624_20045) | 3451927..3452160 | - | 234 | Protein_3155 | JAB domain-containing protein | - |
| PU624_RS20050 (PU624_20050) | 3452866..3454602 | + | 1737 | WP_283546364.1 | hypothetical protein | - |
| PU624_RS20055 (PU624_20055) | 3455219..3456277 | + | 1059 | WP_283546365.1 | DNA cytosine methyltransferase | - |
| PU624_RS20060 (PU624_20060) | 3456290..3459292 | + | 3003 | WP_283546366.1 | ATP-binding protein | - |
| PU624_RS20065 (PU624_20065) | 3459297..3461060 | + | 1764 | WP_283546367.1 | response regulator receiver domain | - |
| PU624_RS20070 (PU624_20070) | 3461347..3461808 | - | 462 | WP_283546368.1 | HNH endonuclease | - |
| PU624_RS20075 (PU624_20075) | 3461757..3462221 | - | 465 | WP_283546369.1 | hypothetical protein | - |
| PU624_RS20080 (PU624_20080) | 3462324..3463569 | - | 1246 | Protein_3162 | tyrosine-type recombinase/integrase | - |
| PU624_RS20090 (PU624_20090) | 3463974..3465005 | - | 1032 | WP_283548040.1 | DUF1176 domain-containing protein | - |
| PU624_RS20095 (PU624_20095) | 3465115..3465576 | - | 462 | WP_283546370.1 | hypothetical protein | - |
| PU624_RS20100 (PU624_20100) | 3465953..3466966 | + | 1014 | WP_283546371.1 | HNH endonuclease domain-containing protein | - |
| PU624_RS20105 (PU624_20105) | 3466963..3467640 | + | 678 | WP_283546372.1 | class I SAM-dependent methyltransferase | - |
| PU624_RS20110 (PU624_20110) | 3468000..3468641 | + | 642 | WP_283546373.1 | hypothetical protein | - |
| PU624_RS20115 (PU624_20115) | 3468622..3468831 | + | 210 | WP_029519648.1 | hypothetical protein | - |
| PU624_RS20120 (PU624_20120) | 3469606..3470601 | - | 996 | WP_283546374.1 | YsnF/AvaK domain-containing protein | - |
| PU624_RS20125 (PU624_20125) | 3470618..3471019 | - | 402 | WP_283546375.1 | DUF2382 domain-containing protein | - |
| PU624_RS20130 (PU624_20130) | 3471551..3472060 | + | 510 | WP_283546376.1 | DUF2501 domain-containing protein | - |
| PU624_RS20135 (PU624_20135) | 3472191..3472826 | + | 636 | WP_283546377.1 | hypothetical protein | - |
| PU624_RS20140 (PU624_20140) | 3472842..3473510 | + | 669 | WP_283546378.1 | MarC family NAAT transporter | - |
| PU624_RS20145 (PU624_20145) | 3473554..3474816 | - | 1263 | WP_283546379.1 | cytochrome c | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|