NZ_CP1181532653426..2762588

MGE detailed information

MGE type: Prophage        MGE length: 109163 bp
Accession: NZ_CP118153        Location: 2653426..2762588         Organism: Pseudomonas chlororaphis strain ATCC 17811       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PUP50_RS12100 (PUP50_12100) 2648688..2649239 + 552 WP_169914426.1 translation initiation factor IF-3 -
PUP50_RS12105 (PUP50_12105) 2649300..2649494 + 195 WP_002553160.1 50S ribosomal protein L35 -
PUP50_RS12110 (PUP50_12110) 2649525..2649881 + 357 WP_007905879.1 50S ribosomal protein L20 -
PUP50_RS12115 (PUP50_12115) 2649991..2651007 + 1017 WP_007920512.1 phenylalanine--tRNA ligase subunit alpha -
PUP50_RS12120 (PUP50_12120) 2651044..2653422 + 2379 WP_114761905.1 phenylalanine--tRNA ligase subunit beta -
PUP50_RS12125 (PUP50_12125) 2653426..2653728 + 303 WP_002553164.1 integration host factor subunit alpha -
PUP50_RS12130 (PUP50_12130) 2653709..2654065 + 357 WP_007920509.1 MerR family transcriptional regulator -
PUP50_RS12140 (PUP50_12140) 2654321..2655433 - 1113 WP_274306769.1 hypothetical protein ; Integrase Integrase
PUP50_RS12145 (PUP50_12145) 2655433..2655645 - 213 WP_274306138.1 hypothetical protein -
PUP50_RS12150 (PUP50_12150) 2655960..2656325 - 366 WP_274306139.1 hypothetical protein -
PUP50_RS12155 (PUP50_12155) 2656387..2656953 - 567 WP_274306140.1 hypothetical protein -
PUP50_RS12160 (PUP50_12160) 2656953..2657402 - 450 WP_274306141.1 hypothetical protein -
PUP50_RS12165 (PUP50_12165) 2657445..2657624 - 180 WP_274306142.1 hypothetical protein -
PUP50_RS12170 (PUP50_12170) 2657621..2658682 - 1062 WP_274306143.1 hypothetical protein -
PUP50_RS12175 (PUP50_12175) 2658672..2659190 - 519 WP_274306144.1 hypothetical protein -
PUP50_RS12180 (PUP50_12180) 2659264..2659494 + 231 WP_274306145.1 hypothetical protein -
PUP50_RS12185 (PUP50_12185) 2659491..2660414 - 924 WP_274306146.1 DNA cytosine methyltransferase -
PUP50_RS12190 (PUP50_12190) 2660426..2661421 - 996 WP_274306147.1 RNA-directed DNA polymerase -
PUP50_RS12195 (PUP50_12195) 2661796..2662149 - 354 WP_274306148.1 four helix bundle protein -
PUP50_RS12200 (PUP50_12200) 2662207..2662794 - 588 WP_274306149.1 DUF1566 domain-containing protein -
PUP50_RS12205 (PUP50_12205) 2662915..2663391 - 477 WP_274306150.1 hypothetical protein -
PUP50_RS12210 (PUP50_12210) 2663816..2664127 - 312 WP_274306151.1 hypothetical protein -
PUP50_RS12215 (PUP50_12215) 2664197..2664667 - 471 WP_274306152.1 hypothetical protein -
PUP50_RS12220 (PUP50_12220) 2664664..2664906 - 243 WP_274300232.1 hypothetical protein -
PUP50_RS12225 (PUP50_12225) 2664903..2666525 - 1623 WP_274306153.1 YqaJ viral recombinase family protein -
PUP50_RS12230 (PUP50_12230) 2666522..2667409 - 888 WP_274306155.1 recombinase RecT -
PUP50_RS12235 (PUP50_12235) 2667681..2667884 - 204 WP_274306156.1 hypothetical protein -
PUP50_RS12240 (PUP50_12240) 2667881..2668072 - 192 WP_124350301.1 hypothetical protein -
PUP50_RS12245 (PUP50_12245) 2668069..2668500 - 432 WP_274306157.1 hypothetical protein -
PUP50_RS12250 (PUP50_12250) 2668497..2668757 - 261 WP_274306158.1 hypothetical protein -
PUP50_RS12255 (PUP50_12255) 2668779..2669609 - 831 WP_274306159.1 hypothetical protein -
PUP50_RS12260 (PUP50_12260) 2670216..2670695 - 480 WP_274306160.1 DUF1566 domain-containing protein -
PUP50_RS12265 (PUP50_12265) 2670724..2670858 - 135 WP_274306161.1 hypothetical protein -
PUP50_RS12270 (PUP50_12270) 2670925..2671161 - 237 WP_274306162.1 hypothetical protein -
PUP50_RS12275 (PUP50_12275) 2671861..2672295 + 435 WP_274306164.1 hypothetical protein -
PUP50_RS12280 (PUP50_12280) 2672373..2672714 - 342 WP_274306166.1 hypothetical protein -
PUP50_RS12285 (PUP50_12285) 2672704..2673042 - 339 WP_274306167.1 hypothetical protein -
PUP50_RS12290 (PUP50_12290) 2673085..2673324 - 240 WP_274306169.1 hypothetical protein -
PUP50_RS12295 (PUP50_12295) 2673346..2674077 - 732 WP_274306170.1 helix-turn-helix transcriptional regulator -
PUP50_RS12300 (PUP50_12300) 2674166..2674375 + 210 WP_274306171.1 hypothetical protein -
PUP50_RS12305 (PUP50_12305) 2674405..2674599 + 195 WP_094952267.1 hypothetical protein -
PUP50_RS12310 (PUP50_12310) 2674638..2674832 + 195 WP_274306172.1 hypothetical protein -
PUP50_RS12315 (PUP50_12315) 2674906..2675124 + 219 WP_274306173.1 hypothetical protein -
PUP50_RS12320 (PUP50_12320) 2675121..2675948 + 828 WP_274306174.1 replication protein -
PUP50_RS12325 (PUP50_12325) 2675945..2677345 + 1401 WP_274306175.1 DnaB-like helicase C-terminal domain-containing protein -
PUP50_RS12330 (PUP50_12330) 2677345..2677623 + 279 WP_274306176.1 hypothetical protein -
PUP50_RS12335 (PUP50_12335) 2677620..2678039 + 420 WP_274306177.1 hypothetical protein -
PUP50_RS12340 (PUP50_12340) 2678036..2678209 + 174 WP_274306178.1 hypothetical protein -
PUP50_RS12345 (PUP50_12345) 2678202..2678789 + 588 WP_274306179.1 DUF1367 family protein -
PUP50_RS12350 (PUP50_12350) 2678789..2679379 + 591 WP_274306770.1 recombination protein NinG -
PUP50_RS12355 (PUP50_12355) 2679376..2680047 + 672 WP_274306180.1 hypothetical protein -
PUP50_RS12375 (PUP50_12375) 2680761..2681093 + 333 WP_041983323.1 phage holin, lambda family -
PUP50_RS12380 (PUP50_12380) 2681098..2681394 + 297 WP_274306181.1 hypothetical protein -
PUP50_RS12385 (PUP50_12385) 2681575..2681745 + 171 WP_274306182.1 hypothetical protein -
PUP50_RS12390 (PUP50_12390) 2681746..2682180 + 435 WP_274306183.1 proteasome subunit beta -
PUP50_RS12395 (PUP50_12395) 2682190..2682789 + 600 WP_274306184.1 hypothetical protein -
PUP50_RS12400 (PUP50_12400) 2682791..2684278 + 1488 WP_274306185.1 terminase -
PUP50_RS12405 (PUP50_12405) 2684275..2685693 + 1419 WP_274306186.1 DUF4055 domain-containing protein -
PUP50_RS12410 (PUP50_12410) 2685668..2686753 + 1086 WP_274306187.1 minor capsid protein -
PUP50_RS12415 (PUP50_12415) 2686836..2687564 + 729 WP_274306188.1 hypothetical protein -
PUP50_RS12420 (PUP50_12420) 2687576..2688529 + 954 WP_124303145.1 major capsid protein -
PUP50_RS12425 (PUP50_12425) 2688574..2688882 + 309 WP_274306189.1 hypothetical protein -
PUP50_RS12430 (PUP50_12430) 2688886..2689389 + 504 WP_274306190.1 hypothetical protein -
PUP50_RS12435 (PUP50_12435) 2689407..2689775 + 369 WP_053260405.1 hypothetical protein -
PUP50_RS12440 (PUP50_12440) 2689772..2690425 + 654 WP_274306191.1 hypothetical protein -
PUP50_RS12445 (PUP50_12445) 2690422..2690838 + 417 WP_274306192.1 phage tail terminator-like protein -
PUP50_RS12450 (PUP50_12450) 2690910..2691566 + 657 WP_274306193.1 phage tail protein -
PUP50_RS12455 (PUP50_12455) 2691570..2691950 + 381 WP_009048053.1 phage tail assembly chaperone -
PUP50_RS12460 (PUP50_12460) 2691995..2692267 + 273 WP_274306771.1 DUF1799 domain-containing protein -
PUP50_RS12465 (PUP50_12465) 2692264..2695479 + 3216 WP_274306194.1 phage tail tape measure protein -
PUP50_RS12470 (PUP50_12470) 2695479..2695817 + 339 WP_274306195.1 phage tail protein -
PUP50_RS12475 (PUP50_12475) 2695827..2696576 + 750 WP_274306196.1 phage minor tail protein L -
PUP50_RS12480 (PUP50_12480) 2696579..2697343 + 765 WP_274306197.1 C40 family peptidase -
PUP50_RS12485 (PUP50_12485) 2697369..2697533 + 165 WP_274306198.1 hypothetical protein -
PUP50_RS12490 (PUP50_12490) 2697526..2697765 - 240 WP_274306199.1 hypothetical protein -
PUP50_RS12495 (PUP50_12495) 2698076..2698375 - 300 WP_274306200.1 HigA family addiction module antitoxin Antitoxin Detail
PUP50_RS12500 (PUP50_12500) 2698384..2698662 - 279 WP_274306201.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
PUP50_RS12505 (PUP50_12505) 2698807..2699229 + 423 WP_274306202.1 hypothetical protein -
PUP50_RS12510 (PUP50_12510) 2699272..2699880 + 609 WP_274306203.1 tail assembly protein -
PUP50_RS12515 (PUP50_12515) 2699916..2700179 + 264 WP_274306204.1 hypothetical protein -
PUP50_RS12520 (PUP50_12520) 2700163..2700393 - 231 WP_274306205.1 hypothetical protein -
PUP50_RS12525 (PUP50_12525) 2700522..2704127 + 3606 WP_274306206.1 DUF1983 domain-containing protein -
PUP50_RS12530 (PUP50_12530) 2704127..2704423 + 297 WP_123410832.1 hypothetical protein -
PUP50_RS12535 (PUP50_12535) 2704433..2705158 + 726 WP_274306207.1 hypothetical protein -
PUP50_RS12540 (PUP50_12540) 2705221..2706396 + 1176 WP_274306208.1 hypothetical protein -
PUP50_RS12545 (PUP50_12545) 2706393..2706764 + 372 WP_274306209.1 tail fiber assembly protein -
PUP50_RS12550 (PUP50_12550) 2706822..2707247 + 426 WP_274306210.1 structural protein -
PUP50_RS12555 (PUP50_12555) 2707244..2707762 + 519 WP_274306211.1 lysis system i-spanin subunit Rz -
PUP50_RS12560 (PUP50_12560) 2708041..2709204 - 1164 WP_274306772.1 hypothetical protein ; Integrase Integrase
PUP50_RS12565 (PUP50_12565) 2709090..2709491 - 402 WP_274306212.1 hypothetical protein -
PUP50_RS12570 (PUP50_12570) 2709531..2710121 - 591 WP_274306213.1 hypothetical protein -
PUP50_RS12575 (PUP50_12575) 2710114..2710302 - 189 WP_102680198.1 hypothetical protein -
PUP50_RS12580 (PUP50_12580) 2710680..2711132 + 453 WP_274306214.1 hypothetical protein -
PUP50_RS12585 (PUP50_12585) 2711212..2711724 + 513 WP_274306215.1 hypothetical protein -
PUP50_RS12590 (PUP50_12590) 2711816..2712025 + 210 WP_274306216.1 hypothetical protein -
PUP50_RS12595 (PUP50_12595) 2712062..2712289 + 228 WP_274306217.1 hypothetical protein -
PUP50_RS12600 (PUP50_12600) 2712523..2713110 + 588 WP_274306773.1 DUF433 domain-containing protein -
PUP50_RS12605 (PUP50_12605) 2713107..2713514 + 408 WP_274306218.1 hypothetical protein -
PUP50_RS12610 (PUP50_12610) 2713561..2714160 - 600 WP_274306219.1 hypothetical protein -
PUP50_RS12615 (PUP50_12615) 2714431..2715009 - 579 WP_274306220.1 hypothetical protein -
PUP50_RS12620 (PUP50_12620) 2715091..2716320 - 1230 WP_274306221.1 hypothetical protein -
PUP50_RS12625 (PUP50_12625) 2716439..2717029 + 591 WP_274306222.1 hypothetical protein -
PUP50_RS12630 (PUP50_12630) 2717679..2718587 + 909 WP_274306223.1 DUF6387 family protein -
PUP50_RS12635 (PUP50_12635) 2718968..2719420 - 453 WP_274306224.1 helix-turn-helix transcriptional regulator -
PUP50_RS12640 (PUP50_12640) 2719556..2719726 + 171 WP_185030227.1 hypothetical protein -
PUP50_RS12645 (PUP50_12645) 2719798..2720109 + 312 WP_274306225.1 hypothetical protein -
PUP50_RS12650 (PUP50_12650) 2720106..2720912 + 807 WP_274306226.1 phage antirepressor KilAC domain-containing protein -
PUP50_RS12655 (PUP50_12655) 2721340..2721654 - 315 WP_274306227.1 Fis family transcriptional regulator -
PUP50_RS12660 (PUP50_12660) 2721665..2722006 - 342 WP_274306228.1 type II toxin-antitoxin system RelE/ParE family toxin -
PUP50_RS12665 (PUP50_12665) 2722135..2722560 - 426 WP_274306229.1 hypothetical protein -
PUP50_RS12670 (PUP50_12670) 2722660..2722905 + 246 WP_016704879.1 YdaS family helix-turn-helix protein -
PUP50_RS12675 (PUP50_12675) 2723029..2723451 + 423 WP_123362486.1 Rha family transcriptional regulator -
PUP50_RS12680 (PUP50_12680) 2723679..2724116 + 438 WP_274306230.1 hypothetical protein -
PUP50_RS12685 (PUP50_12685) 2724113..2724451 + 339 WP_123362484.1 hypothetical protein -
PUP50_RS12690 (PUP50_12690) 2724448..2724711 + 264 WP_123362483.1 hypothetical protein -
PUP50_RS12695 (PUP50_12695) 2724708..2724929 + 222 WP_274306231.1 hypothetical protein -
PUP50_RS12700 (PUP50_12700) 2724933..2725709 + 777 WP_274306232.1 hypothetical protein -
PUP50_RS12705 (PUP50_12705) 2725999..2726496 + 498 WP_274306233.1 IS21 family transposase ISKol1 Transposase
PUP50_RS12710 (PUP50_12710) 2726493..2727854 + 1362 WP_274306234.1 replicative DNA helicase -
PUP50_RS12715 (PUP50_12715) 2727872..2728141 + 270 WP_062823015.1 hypothetical protein -
PUP50_RS12720 (PUP50_12720) 2728138..2728524 + 387 WP_062823014.1 antiterminator Q family protein -
PUP50_RS12725 (PUP50_12725) 2728633..2728881 - 249 WP_274306235.1 hypothetical protein -
PUP50_RS12730 (PUP50_12730) 2729054..2729644 + 591 WP_274306236.1 hypothetical protein -
PUP50_RS12735 (PUP50_12735) 2729702..2729899 - 198 WP_274306860.1 hypothetical protein -
PUP50_RS12740 (PUP50_12740) 2729822..2730844 + 1023 WP_274303258.1 IS110 family transposase ISPfl1 Transposase
PUP50_RS12745 (PUP50_12745) 2731228..2731701 + 474 WP_148050792.1 hypothetical protein -
PUP50_RS12750 (PUP50_12750) 2731901..2732227 + 327 WP_062823011.1 phage holin family protein -
PUP50_RS12755 (PUP50_12755) 2732227..2732523 + 297 WP_274306237.1 hypothetical protein -
PUP50_RS12760 (PUP50_12760) 2732572..2733105 - 534 WP_274306238.1 hypothetical protein -
PUP50_RS12765 (PUP50_12765) 2733171..2733794 + 624 WP_274306239.1 putative metallopeptidase -
PUP50_RS12770 (PUP50_12770) 2733827..2734288 + 462 WP_123410859.1 DUF2280 domain-containing protein -
PUP50_RS12775 (PUP50_12775) 2734275..2735492 + 1218 Protein_2511 terminase family protein -
PUP50_RS12780 (PUP50_12780) 2736647..2738065 + 1419 WP_274306240.1 DUF4055 domain-containing protein -
PUP50_RS12785 (PUP50_12785) 2738040..2739125 + 1086 WP_274306241.1 minor capsid protein -
PUP50_RS12790 (PUP50_12790) 2739158..2739622 + 465 WP_274306242.1 hypothetical protein -
PUP50_RS12795 (PUP50_12795) 2739700..2740428 + 729 WP_274306243.1 hypothetical protein -
PUP50_RS12800 (PUP50_12800) 2740440..2741387 + 948 WP_123410853.1 major capsid protein -
PUP50_RS12805 (PUP50_12805) 2741439..2741747 + 309 WP_123410852.1 hypothetical protein -
PUP50_RS12810 (PUP50_12810) 2741751..2742254 + 504 WP_274306244.1 hypothetical protein -
PUP50_RS12815 (PUP50_12815) 2742295..2742519 + 225 WP_274306245.1 hypothetical protein -
PUP50_RS12820 (PUP50_12820) 2742565..2742933 + 369 WP_274306246.1 hypothetical protein -
PUP50_RS12825 (PUP50_12825) 2742930..2743526 + 597 WP_274306247.1 hypothetical protein -
PUP50_RS12830 (PUP50_12830) 2743523..2743939 + 417 WP_053260407.1 phage tail terminator-like protein -
PUP50_RS12835 (PUP50_12835) 2744338..2744985 + 648 WP_053260408.1 phage tail protein -
PUP50_RS12840 (PUP50_12840) 2744995..2745378 + 384 WP_053260409.1 phage tail assembly chaperone -
PUP50_RS12845 (PUP50_12845) 2745426..2745698 + 273 WP_053260410.1 DUF1799 domain-containing protein -
PUP50_RS12850 (PUP50_12850) 2745726..2748722 + 2997 WP_274306248.1 phage tail tape measure protein -
PUP50_RS12855 (PUP50_12855) 2748722..2749060 + 339 WP_274306249.1 phage tail protein -
PUP50_RS12860 (PUP50_12860) 2749070..2749819 + 750 WP_274306250.1 phage minor tail protein L -
PUP50_RS12865 (PUP50_12865) 2749822..2750622 + 801 WP_274306251.1 C40 family peptidase -
PUP50_RS12870 (PUP50_12870) 2751066..2751332 + 267 WP_123410840.1 hypothetical protein -
PUP50_RS12875 (PUP50_12875) 2751316..2751546 - 231 WP_081002246.1 hypothetical protein -
PUP50_RS12880 (PUP50_12880) 2751684..2751839 + 156 WP_274306252.1 hypothetical protein -
PUP50_RS12885 (PUP50_12885) 2751969..2752775 + 807 WP_274306253.1 hypothetical protein -
PUP50_RS12890 (PUP50_12890) 2752806..2753147 + 342 WP_274306254.1 hypothetical protein -
PUP50_RS12895 (PUP50_12895) 2753193..2753789 + 597 WP_274306255.1 tail assembly protein -
PUP50_RS12900 (PUP50_12900) 2753797..2754075 - 279 WP_274306256.1 hypothetical protein -
PUP50_RS12905 (PUP50_12905) 2754219..2757788 + 3570 WP_274306257.1 DUF1983 domain-containing protein -
PUP50_RS12910 (PUP50_12910) 2757785..2758108 + 324 WP_274306258.1 hypothetical protein -
PUP50_RS12915 (PUP50_12915) 2758108..2758788 + 681 WP_274306259.1 hypothetical protein -
PUP50_RS12920 (PUP50_12920) 2758839..2760014 + 1176 WP_274306260.1 hypothetical protein -
PUP50_RS12925 (PUP50_12925) 2760011..2760409 + 399 WP_274306261.1 tail fiber assembly protein -
PUP50_RS12930 (PUP50_12930) 2760482..2761222 - 741 WP_274306262.1 FkbM family methyltransferase -
PUP50_RS12935 (PUP50_12935) 2761302..2761853 + 552 WP_123410827.1 glycoside hydrolase family 19 protein -
PUP50_RS12940 (PUP50_12940) 2761865..2762371 + 507 WP_274306774.1 lysis system i-spanin subunit Rz -
PUP50_RS12945 (PUP50_12945) 2762361..2762702 - 342 Protein_2545 SOS response-associated peptidase family protein -
PUP50_RS12950 (PUP50_12950) 2762898..2763428 + 531 WP_274306263.1 hypothetical protein -
PUP50_RS12955 (PUP50_12955) 2764302..2764499 + 198 WP_150049999.1 hypothetical protein -
PUP50_RS12960 (PUP50_12960) 2764785..2766593 - 1809 WP_274306264.1 calcium-binding protein -
PUP50_RS12965 (PUP50_12965) 2766875..2767429 - 555 WP_053260432.1 cytochrome b -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance