MGE detailed information
MGE type: Genomic_island MGE length: 10223 bp
Accession: NZ_CP118148 Location: 2486822..2497044 Organism: Pseudomonas chlororaphis strain NCCB 880622 Replicon: chromosome
Accession: NZ_CP118148 Location: 2486822..2497044 Organism: Pseudomonas chlororaphis strain NCCB 880622 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PUP58_RS11215 (PUP58_11215) | 2482683..2484572 | + | 1890 | WP_274319329.1 | PAS domain S-box protein | - |
| PUP58_RS11220 (PUP58_11220) | 2484569..2485204 | + | 636 | WP_023968669.1 | response regulator transcription factor | - |
| PUP58_RS11225 (PUP58_11225) | 2485298..2486062 | + | 765 | WP_124298953.1 | hypothetical protein | - |
| PUP58_RS11230 (PUP58_11230) | 2486822..2487223 | - | 402 | WP_103330829.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PUP58_RS11235 (PUP58_11235) | 2487259..2487441 | - | 183 | WP_274319330.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PUP58_RS11240 (PUP58_11240) | 2487805..2488086 | - | 282 | WP_274319331.1 | hypothetical protein | - |
| PUP58_RS11245 (PUP58_11245) | 2488505..2488861 | - | 357 | WP_124313178.1 | hypothetical protein | - |
| PUP58_RS11250 (PUP58_11250) | 2488846..2489628 | - | 783 | WP_110175430.1 | hypothetical protein | - |
| PUP58_RS11255 (PUP58_11255) | 2489639..2490184 | - | 546 | WP_124313179.1 | hypothetical protein | VF |
| PUP58_RS11260 (PUP58_11260) | 2490385..2491545 | + | 1161 | WP_053275419.1 | IS30 family transposase ISHar4 | Transposase |
| PUP58_RS11265 (PUP58_11265) | 2491816..2492211 | + | 396 | WP_106696970.1 | hypothetical protein | - |
| PUP58_RS11270 (PUP58_11270) | 2492671..2494227 | + | 1557 | WP_274319332.1 | hypothetical protein | - |
| PUP58_RS11275 (PUP58_11275) | 2494467..2495015 | - | 549 | WP_274319333.1 | YniB family protein | - |
| PUP58_RS11280 (PUP58_11280) | 2495373..2496026 | + | 654 | WP_038580376.1 | peroxiredoxin | - |
| PUP58_RS11285 (PUP58_11285) | 2496493..2497044 | + | 552 | WP_028682904.1 | GNAT family N-acetyltransferase | - |
| PUP58_RS11290 (PUP58_11290) | 2497168..2497836 | + | 669 | WP_202339684.1 | ABC transporter ATP-binding protein | - |
| PUP58_RS11295 (PUP58_11295) | 2497802..2500318 | + | 2517 | WP_274319334.1 | FtsX-like permease family protein | - |
| PUP58_RS11300 (PUP58_11300) | 2500308..2501384 | + | 1077 | WP_274319335.1 | lipocalin-like domain-containing protein | - |
| PUP58_RS11305 (PUP58_11305) | 2501588..2501725 | + | 138 | WP_164487456.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|