MGE detailed information
MGE type: Genomic_island MGE length: 13278 bp
Accession: NZ_CP118134 Location: 1824527..1837804 Organism: Pseudomonas synxantha strain ATCC 17413 Replicon: chromosome
Accession: NZ_CP118134 Location: 1824527..1837804 Organism: Pseudomonas synxantha strain ATCC 17413 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PUP72_RS08175 (PUP72_08175) | 1820173..1821288 | + | 1116 | WP_046071423.1 | outer membrane protein assembly factor BamC | - |
| PUP72_RS08180 (PUP72_08180) | 1821293..1822051 | + | 759 | WP_046071424.1 | MBL fold metallo-hydrolase | - |
| PUP72_RS08185 (PUP72_08185) | 1822079..1822792 | + | 714 | WP_010212191.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| PUP72_RS08195 (PUP72_08195) | 1823087..1823482 | + | 396 | WP_046071429.1 | nucleotidyltransferase domain-containing protein | - |
| PUP72_RS08200 (PUP72_08200) | 1823472..1823891 | + | 420 | WP_274358134.1 | DUF86 domain-containing protein | - |
| PUP72_RS08205 (PUP72_08205) | 1823924..1824004 | - | 81 | Protein_1614 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| PUP72_RS08210 (PUP72_08210) | 1824527..1824778 | + | 252 | WP_005786036.1 | hypothetical protein | - |
| PUP72_RS08215 (PUP72_08215) | 1824852..1826078 | - | 1227 | WP_059397051.1 | MFS transporter | - |
| PUP72_RS08220 (PUP72_08220) | 1826317..1826604 | - | 288 | WP_003189536.1 | NadS family protein | Antitoxin Detail |
| PUP72_RS08225 (PUP72_08225) | 1826607..1826921 | - | 315 | WP_046071432.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PUP72_RS08230 (PUP72_08230) | 1827027..1827968 | - | 942 | WP_274358135.1 | LysR family transcriptional regulator | - |
| PUP72_RS08235 (PUP72_08235) | 1828126..1829442 | + | 1317 | WP_068966592.1 | MFS transporter | - |
| PUP72_RS08240 (PUP72_08240) | 1829454..1830683 | + | 1230 | WP_056847345.1 | N-carbamoyl-L-amino-acid hydrolase | VF |
| PUP72_RS08245 (PUP72_08245) | 1830695..1831732 | + | 1038 | WP_046071436.1 | histone deacetylase family protein | - |
| PUP72_RS08250 (PUP72_08250) | 1831751..1832104 | - | 354 | WP_056847344.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PUP72_RS08255 (PUP72_08255) | 1832101..1832505 | - | 405 | WP_046071438.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PUP72_RS08260 (PUP72_08260) | 1832716..1833618 | + | 903 | WP_274358136.1 | HTH-type transcriptional regulator CynR | VF |
| PUP72_RS08265 (PUP72_08265) | 1833610..1834368 | - | 759 | WP_056847341.1 | substrate-binding domain-containing protein | - |
| PUP72_RS08270 (PUP72_08270) | 1834368..1835672 | - | 1305 | WP_059397045.1 | MFS transporter | - |
| PUP72_RS08275 (PUP72_08275) | 1835870..1836013 | + | 144 | WP_173664474.1 | hypothetical protein | - |
| PUP72_RS08280 (PUP72_08280) | 1836174..1836611 | - | 438 | WP_046071441.1 | hypothetical protein | - |
| PUP72_RS08285 (PUP72_08285) | 1837628..1837804 | - | 177 | WP_173664475.1 | hypothetical protein | - |
| PUP72_RS08290 (PUP72_08290) | 1837934..1838857 | + | 924 | WP_046071442.1 | LysR substrate-binding domain-containing protein | - |
| PUP72_RS08295 (PUP72_08295) | 1838947..1839882 | - | 936 | WP_046071443.1 | LysR family transcriptional regulator | - |
| PUP72_RS08300 (PUP72_08300) | 1840020..1841207 | - | 1188 | WP_059397044.1 | cyanate transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|