MGE detailed information
MGE type: Prophage MGE length: 61571 bp
Accession: NZ_CP118083 Location: 1122694..1184264 Organism: Bifidobacterium breve strain VSI11 Replicon: chromosome
Accession: NZ_CP118083 Location: 1122694..1184264 Organism: Bifidobacterium breve strain VSI11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PUW55_RS04985 (PUW55_04985) | 1117905..1119089 | + | 1185 | WP_032743093.1 | PhoH family protein | - |
| PUW55_RS04990 (PUW55_04990) | 1119079..1119630 | + | 552 | WP_003829262.1 | rRNA maturation RNase YbeY | - |
| PUW55_RS04995 (PUW55_04995) | 1119655..1121088 | + | 1434 | WP_003833268.1 | hemolysin family protein | - |
| PUW55_RS05000 (PUW55_05000) | 1121090..1122097 | + | 1008 | WP_274982749.1 | GTPase Era | - |
| PUW55_RS05005 (PUW55_05005) | 1122700..1123176 | + | 477 | WP_230578353.1 | hypothetical protein | - |
| PUW55_RS05010 (PUW55_05010) | 1124138..1124404 | - | 267 | WP_025221566.1 | phage holin | - |
| PUW55_RS05015 (PUW55_05015) | 1124491..1125726 | - | 1236 | WP_274982750.1 | GH25 family lysozyme | - |
| PUW55_RS05020 (PUW55_05020) | 1125787..1126182 | - | 396 | WP_052789095.1 | hypothetical protein | - |
| PUW55_RS05025 (PUW55_05025) | 1126209..1126664 | - | 456 | WP_052789096.1 | hypothetical protein | - |
| PUW55_RS05030 (PUW55_05030) | 1126684..1127049 | - | 366 | WP_241487400.1 | hypothetical protein | - |
| PUW55_RS05035 (PUW55_05035) | 1127541..1127978 | - | 438 | WP_274982546.1 | hypothetical protein | - |
| PUW55_RS05040 (PUW55_05040) | 1128431..1128604 | - | 174 | WP_171842883.1 | hypothetical protein | - |
| PUW55_RS05045 (PUW55_05045) | 1128680..1128976 | - | 297 | WP_052789099.1 | hypothetical protein | - |
| PUW55_RS05050 (PUW55_05050) | 1129153..1129473 | - | 321 | Protein_980 | IS21 family transposase ISBlo1 | Transposase |
| PUW55_RS05055 (PUW55_05055) | 1129628..1129780 | - | 153 | WP_274982751.1 | hypothetical protein | - |
| PUW55_RS05060 (PUW55_05060) | 1129860..1130054 | - | 195 | WP_052789102.1 | hypothetical protein | - |
| PUW55_RS05065 (PUW55_05065) | 1130073..1134008 | - | 3936 | WP_274982752.1 | hypothetical protein | - |
| PUW55_RS05070 (PUW55_05070) | 1134022..1134972 | - | 951 | WP_274982753.1 | hypothetical protein | - |
| PUW55_RS05075 (PUW55_05075) | 1134982..1139820 | - | 4839 | WP_274982754.1 | hypothetical protein | - |
| PUW55_RS05080 (PUW55_05080) | 1139839..1140192 | - | 354 | WP_103619857.1 | hypothetical protein | - |
| PUW55_RS05085 (PUW55_05085) | 1140225..1140647 | - | 423 | WP_274982755.1 | hypothetical protein | - |
| PUW55_RS05090 (PUW55_05090) | 1140864..1141469 | - | 606 | WP_274982756.1 | hypothetical protein | - |
| PUW55_RS05095 (PUW55_05095) | 1141538..1141996 | - | 459 | WP_052789107.1 | hypothetical protein | - |
| PUW55_RS05100 (PUW55_05100) | 1142003..1142356 | - | 354 | WP_274982757.1 | hypothetical protein | - |
| PUW55_RS05105 (PUW55_05105) | 1142319..1142882 | - | 564 | WP_274982758.1 | hypothetical protein | - |
| PUW55_RS05110 (PUW55_05110) | 1142890..1143321 | - | 432 | WP_274982759.1 | hypothetical protein | - |
| PUW55_RS05115 (PUW55_05115) | 1143337..1144404 | - | 1068 | WP_052789110.1 | major capsid protein | - |
| PUW55_RS05120 (PUW55_05120) | 1144472..1145260 | - | 789 | WP_042987198.1 | hypothetical protein | - |
| PUW55_RS05125 (PUW55_05125) | 1145291..1145926 | - | 636 | WP_052789111.1 | hypothetical protein | - |
| PUW55_RS05130 (PUW55_05130) | 1145942..1147018 | - | 1077 | WP_080684997.1 | hypothetical protein | - |
| PUW55_RS05135 (PUW55_05135) | 1147027..1148649 | - | 1623 | WP_274982760.1 | hypothetical protein | - |
| PUW55_RS05140 (PUW55_05140) | 1148671..1150569 | - | 1899 | WP_274982761.1 | hypothetical protein | - |
| PUW55_RS05145 (PUW55_05145) | 1150569..1151048 | - | 480 | WP_274982762.1 | hypothetical protein | - |
| PUW55_RS05150 (PUW55_05150) | 1151577..1151915 | - | 339 | WP_014484970.1 | HNH endonuclease signature motif containing protein | - |
| PUW55_RS05180 (PUW55_05180) | 1154093..1154320 | + | 228 | WP_025221588.1 | helix-turn-helix transcriptional regulator | - |
| PUW55_RS05185 (PUW55_05185) | 1154533..1155147 | + | 615 | WP_274982763.1 | lysozyme | - |
| PUW55_RS05190 (PUW55_05190) | 1155237..1155398 | + | 162 | WP_155245937.1 | hypothetical protein | - |
| PUW55_RS05195 (PUW55_05195) | 1155395..1155739 | + | 345 | WP_014484967.1 | hypothetical protein | - |
| PUW55_RS05200 (PUW55_05200) | 1155855..1156196 | + | 342 | WP_071477984.1 | hypothetical protein | - |
| PUW55_RS05205 (PUW55_05205) | 1156395..1157180 | + | 786 | WP_012577858.1 | hypothetical protein | - |
| PUW55_RS05210 (PUW55_05210) | 1157182..1157523 | + | 342 | WP_012577857.1 | hypothetical protein | - |
| PUW55_RS05215 (PUW55_05215) | 1157523..1157705 | + | 183 | WP_052789116.1 | hypothetical protein | - |
| PUW55_RS05220 (PUW55_05220) | 1157793..1158092 | + | 300 | WP_012577856.1 | hypothetical protein | - |
| PUW55_RS05225 (PUW55_05225) | 1158168..1158452 | + | 285 | WP_174773700.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| PUW55_RS05230 (PUW55_05230) | 1158433..1158801 | + | 369 | WP_274982764.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| PUW55_RS05235 (PUW55_05235) | 1158989..1159534 | + | 546 | WP_274982765.1 | hypothetical protein | - |
| PUW55_RS05240 (PUW55_05240) | 1159531..1159758 | + | 228 | WP_274982766.1 | hypothetical protein | - |
| PUW55_RS05245 (PUW55_05245) | 1159755..1159991 | + | 237 | WP_131234413.1 | hypothetical protein | - |
| PUW55_RS05250 (PUW55_05250) | 1159988..1160188 | + | 201 | WP_131234414.1 | hypothetical protein | - |
| PUW55_RS05255 (PUW55_05255) | 1160281..1161513 | + | 1233 | WP_274982767.1 | Fic/DOC family N-terminal domain-containing protein | - |
| PUW55_RS05260 (PUW55_05260) | 1161672..1161947 | - | 276 | WP_131234415.1 | hypothetical protein | - |
| PUW55_RS05265 (PUW55_05265) | 1162045..1162371 | - | 327 | WP_274982768.1 | hypothetical protein | - |
| PUW55_RS05270 (PUW55_05270) | 1162368..1162637 | - | 270 | WP_131187413.1 | hypothetical protein | - |
| PUW55_RS05275 (PUW55_05275) | 1162634..1163158 | - | 525 | WP_071477971.1 | hypothetical protein | - |
| PUW55_RS05280 (PUW55_05280) | 1163155..1163853 | - | 699 | WP_071477970.1 | hypothetical protein | - |
| PUW55_RS05285 (PUW55_05285) | 1163850..1164335 | - | 486 | WP_154536591.1 | hypothetical protein | - |
| PUW55_RS05290 (PUW55_05290) | 1164350..1164616 | - | 267 | WP_274982769.1 | hypothetical protein | - |
| PUW55_RS05295 (PUW55_05295) | 1164613..1164948 | - | 336 | WP_237441080.1 | phage antirepressor KilAC domain-containing protein | - |
| PUW55_RS05300 (PUW55_05300) | 1164964..1165392 | - | 429 | WP_274982770.1 | Bro-N domain-containing protein | - |
| PUW55_RS05305 (PUW55_05305) | 1165389..1166240 | - | 852 | WP_081356702.1 | hypothetical protein | - |
| PUW55_RS05310 (PUW55_05310) | 1166369..1166860 | - | 492 | WP_025221607.1 | hypothetical protein | - |
| PUW55_RS05315 (PUW55_05315) | 1166844..1167554 | - | 711 | WP_274982771.1 | hypothetical protein | - |
| PUW55_RS05320 (PUW55_05320) | 1167725..1167964 | - | 240 | WP_012577840.1 | hypothetical protein | - |
| PUW55_RS05325 (PUW55_05325) | 1168190..1168468 | - | 279 | WP_274982772.1 | hypothetical protein | - |
| PUW55_RS05330 (PUW55_05330) | 1168475..1168846 | - | 372 | WP_012577838.1 | hypothetical protein | - |
| PUW55_RS05335 (PUW55_05335) | 1168843..1169235 | - | 393 | WP_012577837.1 | hypothetical protein | - |
| PUW55_RS05340 (PUW55_05340) | 1169363..1169521 | - | 159 | WP_015713523.1 | hypothetical protein | - |
| PUW55_RS05345 (PUW55_05345) | 1169499..1169789 | - | 291 | WP_012577836.1 | hypothetical protein | - |
| PUW55_RS05350 (PUW55_05350) | 1169782..1170006 | - | 225 | WP_012577835.1 | WhiB family transcriptional regulator | - |
| PUW55_RS05355 (PUW55_05355) | 1170043..1170252 | - | 210 | WP_080826315.1 | hypothetical protein | - |
| PUW55_RS05360 (PUW55_05360) | 1170249..1170413 | - | 165 | WP_007051868.1 | hypothetical protein | - |
| PUW55_RS05365 (PUW55_05365) | 1170410..1170694 | - | 285 | WP_012577833.1 | hypothetical protein | - |
| PUW55_RS05370 (PUW55_05370) | 1170687..1170974 | - | 288 | WP_012577832.1 | hypothetical protein | - |
| PUW55_RS05375 (PUW55_05375) | 1170964..1171176 | - | 213 | WP_274982773.1 | hypothetical protein | - |
| PUW55_RS05380 (PUW55_05380) | 1171173..1171685 | - | 513 | WP_012577831.1 | hypothetical protein | - |
| PUW55_RS05385 (PUW55_05385) | 1171951..1172196 | - | 246 | WP_012577830.1 | hypothetical protein | - |
| PUW55_RS05390 (PUW55_05390) | 1172193..1172555 | - | 363 | WP_274982774.1 | hypothetical protein | - |
| PUW55_RS05395 (PUW55_05395) | 1172552..1172869 | - | 318 | WP_274982775.1 | hypothetical protein | - |
| PUW55_RS05400 (PUW55_05400) | 1172866..1173126 | - | 261 | WP_274982776.1 | hypothetical protein | - |
| PUW55_RS05405 (PUW55_05405) | 1173123..1173734 | - | 612 | WP_274982777.1 | hypothetical protein | - |
| PUW55_RS05410 (PUW55_05410) | 1174161..1174514 | - | 354 | WP_174773692.1 | hypothetical protein | - |
| PUW55_RS05415 (PUW55_05415) | 1174501..1175073 | - | 573 | WP_274982778.1 | single-stranded DNA-binding protein | - |
| PUW55_RS05420 (PUW55_05420) | 1175258..1176193 | - | 936 | WP_014484952.1 | hypothetical protein | - |
| PUW55_RS05425 (PUW55_05425) | 1176183..1176767 | - | 585 | WP_012577823.1 | ERF family protein | - |
| PUW55_RS05430 (PUW55_05430) | 1176758..1177609 | - | 852 | WP_012577822.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| PUW55_RS05435 (PUW55_05435) | 1177606..1177773 | - | 168 | WP_014484951.1 | DivIVA domain-containing protein | - |
| PUW55_RS05440 (PUW55_05440) | 1177757..1178035 | - | 279 | WP_012577821.1 | hypothetical protein | - |
| PUW55_RS05445 (PUW55_05445) | 1178035..1178388 | - | 354 | WP_012577820.1 | hypothetical protein | - |
| PUW55_RS05450 (PUW55_05450) | 1178646..1178867 | - | 222 | WP_041983273.1 | hypothetical protein | - |
| PUW55_RS05455 (PUW55_05455) | 1179108..1179323 | - | 216 | WP_065456973.1 | hypothetical protein | - |
| PUW55_RS05460 (PUW55_05460) | 1179635..1179904 | - | 270 | WP_174773061.1 | helix-turn-helix transcriptional regulator | - |
| PUW55_RS05465 (PUW55_05465) | 1180050..1180376 | + | 327 | WP_274982779.1 | helix-turn-helix transcriptional regulator | - |
| PUW55_RS05470 (PUW55_05470) | 1180360..1180761 | + | 402 | WP_234897907.1 | hypothetical protein | - |
| PUW55_RS05475 (PUW55_05475) | 1180800..1181159 | + | 360 | WP_274982780.1 | hypothetical protein | - |
| PUW55_RS05480 (PUW55_05480) | 1181222..1181842 | + | 621 | WP_274982781.1 | hypothetical protein | - |
| PUW55_RS05485 (PUW55_05485) | 1181914..1182342 | - | 429 | WP_231112850.1 | hypothetical protein | - |
| PUW55_RS05490 (PUW55_05490) | 1182417..1182854 | - | 438 | WP_012577811.1 | DUF4065 domain-containing protein | - |
| PUW55_RS05495 (PUW55_05495) | 1182945..1184267 | - | 1323 | WP_234897908.1 | hypothetical protein ; Integrase | Integrase |
| PUW55_RS05500 (PUW55_05500) | 1184395..1186428 | - | 2034 | WP_021649620.1 | AMP-dependent synthetase/ligase | - |
| PUW55_RS05505 (PUW55_05505) | 1186821..1187984 | + | 1164 | WP_021649619.1 | NAD(P) transhydrogenase subunit alpha | - |
| PUW55_RS05510 (PUW55_05510) | 1188000..1188305 | + | 306 | WP_003829267.1 | NAD(P) transhydrogenase subunit alpha | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|