MGE detailed information
MGE type: Conjugative plasmid MGE length: 122614 bp
Accession: NZ_CP118015 Location: 1..122614 Organism: Escherichia coli strain B-766 Replicon: plasmid unnamed1
Accession: NZ_CP118015 Location: 1..122614 Organism: Escherichia coli strain B-766 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PT280_RS24790 | 556..810 | + | 255 | WP_000678528.1 | hypothetical protein | - |
| PT280_RS24795 | 1308..1652 | + | 345 | WP_000792769.1 | hypothetical protein | - |
| PT280_RS24800 | 1826..2827 | - | 1002 | WP_000785695.1 | DUF4238 domain-containing protein | - |
| PT280_RS24805 | 3199..3342 | + | 144 | WP_000877738.1 | hypothetical protein | - |
| PT280_RS24810 | 3356..4939 | - | 1584 | WP_000355318.1 | IS66 family transposase ISEc49 | Transposase |
| PT280_RS24815 | 4982..5362 | - | 381 | WP_000957247.1 | IS66 family transposase ISEc49 | Transposase |
| PT280_RS24820 | 5349..5678 | - | 330 | WP_001137792.1 | IS66 family transposase ISEc49 | Transposase |
| PT280_RS24825 | 6181..6471 | - | 291 | WP_274292420.1 | korC | - |
| PT280_RS24830 | 6471..7595 | - | 1125 | WP_000386705.1 | DUF4238 domain-containing protein | - |
| PT280_RS24835 | 7630..8874 | - | 1245 | WP_244446200.1 | hypothetical protein | - |
| PT280_RS24840 | 9011..10255 | + | 1245 | WP_244446200.1 | hypothetical protein | - |
| PT280_RS24845 | 10290..11414 | + | 1125 | WP_000386705.1 | DUF4238 domain-containing protein | - |
| PT280_RS24850 | 11411..11725 | - | 315 | WP_274292421.1 | hypothetical protein | - |
| PT280_RS24855 | 11725..12849 | - | 1125 | WP_000386705.1 | DUF4238 domain-containing protein | - |
| PT280_RS24860 | 12884..14407 | - | 1524 | WP_274292422.1 | hypothetical protein | - |
| PT280_RS24865 | 14698..15168 | - | 471 | WP_001123022.1 | hypothetical protein | VF |
| PT280_RS24870 | 15264..16121 | - | 858 | WP_000751748.1 | K88 fimbrial protein AD | VF |
| PT280_RS24875 | 16358..16849 | - | 492 | WP_000753462.1 | hypothetical protein | VF |
| PT280_RS24880 | 16884..17660 | - | 777 | WP_000044490.1 | Chaperone protein FaeE | VF |
| PT280_RS24885 | 17653..20055 | - | 2403 | WP_000466170.1 | Outer membrane usher protein YraJ | VF |
| PT280_RS24890 | 20112..20654 | - | 543 | WP_001350006.1 | hypothetical protein | VF |
| PT280_RS24895 | 20696..20992 | - | 297 | WP_049789836.1 | Major pilu subunit operon regulatory protein PapB | VF |
| PT280_RS24900 | 21699..22073 | + | 375 | WP_274292423.1 | hypothetical protein | - |
| PT280_RS24905 | 22073..23260 | + | 1188 | WP_001350007.1 | IS91 family transposase ISEc37 | Transposase |
| PT280_RS24910 | 23449..23652 | - | 204 | Protein_25 | hypothetical protein | - |
| PT280_RS24915 | 23642..23866 | + | 225 | Protein_26 | hypothetical protein | - |
| PT280_RS24920 | 24055..25242 | - | 1188 | WP_001350007.1 | IS91 family transposase ISEc37 | Transposase |
| PT280_RS24925 | 25242..25607 | - | 366 | WP_000124136.1 | hypothetical protein | - |
| PT280_RS24930 | 26897..27262 | + | 366 | WP_000124136.1 | hypothetical protein | - |
| PT280_RS24935 | 27262..28449 | + | 1188 | WP_001350007.1 | IS91 family transposase ISEc37 | Transposase |
| PT280_RS24940 | 28638..29324 | - | 687 | Protein_31 | colicin-Ia domain protein | - |
| PT280_RS24945 | 29602..30948 | - | 1347 | WP_001132027.1 | protein YagA | - |
| PT280_RS24950 | 31302..31904 | + | 603 | WP_000517697.1 | ProQ/FINO family protein | - |
| PT280_RS24955 | 31960..32454 | + | 495 | WP_001350009.1 | hypothetical protein | - |
| PT280_RS24960 | 32454..32720 | + | 267 | WP_000627834.1 | hypothetical protein | - |
| PT280_RS24965 | 32989..33198 | - | 210 | Protein_36 | hypothetical protein | - |
| PT280_RS24970 | 33304..33579 | - | 276 | WP_000421267.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PT280_RS24975 | 33579..33863 | - | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| PT280_RS24980 | 34767..35798 | - | 1032 | WP_000907868.1 | plasmid replication initiator RepA | - |
| PT280_RS24985 | 36755..36910 | + | 156 | Protein_40 | ash family protein | - |
| PT280_RS24990 | 36951..37238 | + | 288 | WP_000074853.1 | hypothetical protein | - |
| PT280_RS24995 | 37680..38213 | + | 534 | WP_001350011.1 | transcription termination/antitermination NusG family protein | - |
| PT280_RS25000 | 38467..39150 | + | 684 | WP_000213860.1 | hypothetical protein | - |
| PT280_RS25005 | 39314..39568 | + | 255 | WP_001113622.1 | PilI type IV pilus biogenesis protein | - |
| PT280_RS25010 | 40582..41649 | + | 1068 | WP_001350013.1 | hypothetical protein | VF |
| PT280_RS25015 | 41649..42086 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| PT280_RS25020 | 42100..43782 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| PT280_RS25025 | 43775..45070 | + | 1296 | WP_000752792.1 | type 4b pilus protein PilO2 | - |
| PT280_RS25030 | 45057..45509 | + | 453 | WP_001236383.1 | hypothetical protein | VF |
| PT280_RS25035 | 45520..47073 | + | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| PT280_RS25040 | 47086..48171 | + | 1086 | WP_001208804.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| PT280_RS25045 | 48188..48802 | + | 615 | WP_000908226.1 | hypothetical protein | VF |
| PT280_RS25050 | 48812..49372 | + | 561 | WP_000014005.1 | hypothetical protein | VF |
| PT280_RS25055 | 49357..50013 | + | 657 | WP_001193549.1 | hypothetical protein | VF |
| PT280_RS25060 | 50013..51305 | + | 1293 | WP_001350014.1 | hypothetical protein | VF |
| PT280_RS25065 | 51362..51487 | - | 126 | Protein_56 | transposase | - |
| PT280_RS25070 | 51695..52519 | + | 825 | WP_001238943.1 | conjugal transfer protein TraE | - |
| PT280_RS25075 | 52605..53807 | + | 1203 | WP_000976350.1 | conjugal transfer protein TraF | - |
| PT280_RS25080 | 53867..54451 | + | 585 | WP_000977526.1 | histidine phosphatase family protein | - |
| PT280_RS25085 | 54846..55280 | + | 435 | WP_274292424.1 | hypothetical protein | VF |
| PT280_RS25090 | 55337..56514 | + | 1178 | Protein_61 | IS3 family transposase | - |
| PT280_RS25095 | 56563..57381 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| PT280_RS25100 | 57378..58526 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| PT280_RS25105 | 58523..58813 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| PT280_RS25110 | 58828..59379 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| PT280_RS25115 | 59469..63236 | + | 3768 | WP_001141538.1 | DUF5710 domain-containing protein | - |
| PT280_RS25120 | 63254..63601 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| PT280_RS25125 | 63598..64290 | + | 693 | WP_000138549.1 | DotI/IcmL family type IV secretion protein | - |
| PT280_RS25130 | 64301..65284 | + | 984 | WP_001191878.1 | hypothetical protein | VF |
| PT280_RS25135 | 65287..66576 | + | 1290 | WP_001271991.1 | conjugal transfer protein TraO | - |
| PT280_RS25140 | 66576..67280 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| PT280_RS25145 | 67280..67807 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| PT280_RS25150 | 67858..68262 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| PT280_RS25155 | 68326..68514 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| PT280_RS25160 | 68498..69298 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| PT280_RS25165 | 69388..72432 | + | 3045 | WP_001024787.1 | IncI1-type conjugal transfer protein TraU | - |
| PT280_RS25170 | 72432..73046 | + | 615 | WP_000337400.1 | IncI1-type conjugal transfer protein TraV | - |
| PT280_RS25175 | 73013..74215 | + | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| PT280_RS25180 | 74244..74828 | + | 585 | WP_001037990.1 | IncI1-type conjugal transfer protein TraX | - |
| PT280_RS25185 | 74925..77093 | + | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| PT280_RS25190 | 77169..77783 | + | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| PT280_RS25195 | 77849..78040 | + | 192 | WP_001147208.1 | hemolysin expression modulator Hha | - |
| PT280_RS25200 | 78250..78426 | + | 177 | WP_001054904.1 | hypothetical protein | - |
| PT280_RS25205 | 78491..78586 | - | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| PT280_RS25210 | 79218..80126 | + | 909 | WP_000055084.1 | hypothetical protein | - |
| PT280_RS25215 | 80388..81596 | + | 1209 | WP_000121272.1 | IncI1-type conjugal transfer protein TrbA | - |
| PT280_RS25220 | 81615..82685 | + | 1071 | WP_000151587.1 | IncI1-type conjugal transfer protein TrbB | - |
| PT280_RS25225 | 82678..84969 | + | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| PT280_RS25230 | 85006..87705 | - | 2700 | WP_001350015.1 | Protein TraI | Relaxase |
| PT280_RS25235 | 87716..88048 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| PT280_RS25240 | 88282..88617 | + | 336 | WP_000157097.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| PT280_RS25245 | 88703..89551 | - | 849 | WP_001077028.1 | DUF4942 domain-containing protein | - |
| PT280_RS25250 | 90133..90384 | + | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| PT280_RS25255 | 90415..90636 | - | 222 | WP_014358130.1 | hypothetical protein | - |
| PT280_RS25260 | 90636..91526 | - | 891 | WP_000038398.1 | Recombination-promoting nuclease RpnA | VF |
| PT280_RS25265 | 91591..91857 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| PT280_RS25270 | 91951..92385 | - | 435 | WP_000218859.1 | hypothetical protein | - |
| PT280_RS25275 | 92463..93832 | + | 1370 | WP_085947770.1 | IS3 family transposase IS150 | Transposase |
| PT280_RS25280 | 94560..95060 | - | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| PT280_RS25285 | 95523..96119 | - | 597 | WP_000978014.1 | hypothetical protein | - |
| PT280_RS25290 | 96116..96835 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| PT280_RS25295 | 96832..97266 | - | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| PT280_RS25300 | 97321..99279 | - | 1959 | WP_000117798.1 | ParB/RepB/Spo0J family partition protein | - |
| PT280_RS25305 | 99341..99574 | - | 234 | WP_001042947.1 | DUF905 domain-containing protein | - |
| PT280_RS25310 | 99631..100158 | - | 528 | WP_001276121.1 | single-stranded DNA-binding protein | - |
| PT280_RS25315 | 100542..100856 | - | 315 | WP_001434357.1 | hypothetical protein | - |
| PT280_RS25320 | 100927..101118 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| PT280_RS25325 | 101115..101538 | - | 424 | Protein_108 | DUF1380 family protein | - |
| PT280_RS25330 | 101585..102010 | - | 426 | WP_001198902.1 | antirestriction protein | - |
| PT280_RS25335 | 102421..103197 | - | 777 | WP_001005028.1 | hypothetical protein | - |
| PT280_RS25340 | 103243..103710 | - | 468 | WP_014640312.1 | DUF1380 family protein | - |
| PT280_RS25345 | 103691..103765 | - | 75 | Protein_112 | hypothetical protein | - |
| PT280_RS25350 | 103758..103883 | + | 126 | Protein_113 | hypothetical protein | - |
| PT280_RS25355 | 103864..104331 | + | 468 | WP_014640312.1 | DUF1380 family protein | - |
| PT280_RS25360 | 104377..105153 | + | 777 | WP_001005028.1 | hypothetical protein | - |
| PT280_RS25365 | 105564..105989 | + | 426 | WP_001198902.1 | antirestriction protein | - |
| PT280_RS25370 | 106036..106458 | + | 423 | WP_000271691.1 | DUF1380 family protein | - |
| PT280_RS25375 | 106455..106646 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| PT280_RS25380 | 106717..107031 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| PT280_RS25385 | 107415..107942 | + | 528 | WP_001276121.1 | single-stranded DNA-binding protein | - |
| PT280_RS25390 | 108002..108529 | - | 528 | WP_001276121.1 | single-stranded DNA-binding protein | - |
| PT280_RS25395 | 108913..109227 | - | 315 | WP_001434357.1 | hypothetical protein | - |
| PT280_RS25400 | 109298..109489 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| PT280_RS25405 | 109486..109909 | - | 424 | Protein_124 | DUF1380 family protein | - |
| PT280_RS25410 | 109956..110381 | - | 426 | WP_001198902.1 | antirestriction protein | - |
| PT280_RS25415 | 110792..111568 | - | 777 | WP_001005028.1 | hypothetical protein | - |
| PT280_RS25420 | 111614..112081 | - | 468 | WP_014640312.1 | DUF1380 family protein | - |
| PT280_RS25425 | 112062..112283 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| PT280_RS25430 | 112284..112967 | - | 684 | WP_000086148.1 | DNA methylase | - |
| PT280_RS25435 | 113043..113354 | - | 312 | WP_014640311.1 | hypothetical protein | - |
| PT280_RS25440 | 113351..114253 | - | 903 | WP_125075260.1 | DUF1281 domain-containing protein | - |
| PT280_RS25445 | 114671..114919 | + | 249 | WP_000618103.1 | DinI-like family protein | - |
| PT280_RS25450 | 114916..115353 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PT280_RS25455 | 115353..116627 | + | 1275 | WP_000457498.1 | Y-family DNA polymerase | - |
| PT280_RS25460 | 116629..117045 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| PT280_RS25465 | 117038..118018 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| PT280_RS25470 | 118432..118740 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| PT280_RS25475 | 118827..119471 | - | 645 | WP_001144036.1 | ParA family protein | - |
| PT280_RS25480 | 119652..120431 | - | 780 | WP_000147282.1 | site-specific integrase | - |
| PT280_RS25485 | 120431..121252 | - | 822 | WP_001316850.1 | hypothetical protein | - |
| PT280_RS25490 | 121311..121661 | - | 351 | WP_000493379.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|