MGE detailed information
MGE type: Genomic_island MGE length: 20025 bp
Accession: NZ_CP117962 Location: 1609870..1629894 Organism: Escherichia coli strain JM109 Replicon: chromosome
Accession: NZ_CP117962 Location: 1609870..1629894 Organism: Escherichia coli strain JM109 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PT299_RS09045 (1605349) | 1605349..1605852 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| PT299_RS09050 (1605865) | 1605865..1606395 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| PT299_RS09055 (1606405) | 1606405..1609041 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| PT299_RS09060 (1609108) | 1609108..1609833 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| PT299_RS09065 (1609870) | 1609870..1610409 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| PT299_RS09070 (1610474) | 1610474..1611022 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| PT299_RS09075 (1611504) | 1611504..1612058 | - | 555 | WP_000983104.1 | Tyrosine recombinase XerD | VF |
| PT299_RS09080 (1612111) | 1612111..1612804 | - | 694 | Protein_1538 | IS1-like element IS1A family transposase | - |
| PT299_RS09085 (1613350) | 1613350..1613952 | - | 603 | WP_000790589.1 | ISKra4 family transposase ISCep1 | VF |
| PT299_RS09090 (1615408) | 1615408..1616124 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| PT299_RS09095 (1616144) | 1616144..1617250 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| PT299_RS09100 (1617315) | 1617315..1618295 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| PT299_RS09105 (1618405) | 1618405..1618610 | + | 206 | Protein_1543 | HNH endonuclease | - |
| PT299_RS09110 (1618878) | 1618878..1620118 | - | 1241 | Protein_1544 | helicase YjhR | - |
| PT299_RS09115 (1620234) | 1620234..1620365 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| PT299_RS09120 (1620856) | 1620856..1621113 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| PT299_RS09125 (1621125) | 1621125..1621670 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| PT299_RS09130 (1621726) | 1621726..1622472 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| PT299_RS09135 (1622641) | 1622641..1622859 | + | 219 | Protein_1549 | hypothetical protein | - |
| PT299_RS09140 (1622897) | 1622897..1623013 | + | 117 | Protein_1550 | VOC family protein | - |
| PT299_RS09145 (1623258) | 1623258..1624379 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| PT299_RS09150 (1624376) | 1624376..1624654 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| PT299_RS09155 (1624666) | 1624666..1625979 | + | 1314 | WP_000460842.1 | PTS sugar transporter subunit IIC SgcC | - |
| PT299_RS09160 (1625992) | 1625992..1626798 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| PT299_RS09165 (1626929) | 1626929..1627360 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| PT299_RS09170 (1627372) | 1627372..1628004 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| PT299_RS09175 (1628021) | 1628021..1628803 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| PT299_RS09180 (1629106) | 1629106..1629894 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| PT299_RS09185 (1629899) | 1629899..1630804 | + | 906 | WP_000714564.1 | dihydrodipicolinate synthase family protein | - |
| PT299_RS09190 (1630815) | 1630815..1632782 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| PT299_RS09195 (1632889) | 1632889..1634238 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|