MGE detailed information
MGE type: Genomic_island MGE length: 26266 bp
Accession: NZ_CP117962 Location: 1250767..1277032 Organism: Escherichia coli strain JM109 Replicon: chromosome
Accession: NZ_CP117962 Location: 1250767..1277032 Organism: Escherichia coli strain JM109 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PT299_RS07345 (1246737) | 1246737..1247588 | - | 852 | WP_000004027.1 | taurine dioxygenase | - |
| PT299_RS07350 (1247585) | 1247585..1248412 | - | 828 | WP_000114620.1 | taurine ABC transporter permease TauC | - |
| PT299_RS07355 (1248409) | 1248409..1249176 | - | 768 | WP_000939375.1 | taurine ABC transporter ATP-binding subunit | - |
| PT299_RS07360 (1249189) | 1249189..1250151 | - | 963 | WP_001018417.1 | taurine ABC transporter substrate-binding protein | - |
| PT299_RS07365 (1250767) | 1250767..1251438 | + | 672 | Protein_1205 | PIG-L family deacetylase | - |
| PT299_RS07370 (1251448) | 1251448..1252644 | + | 1197 | WP_000860444.1 | glycosyltransferase family 2 protein | - |
| PT299_RS07375 (1252568) | 1252568..1252795 | + | 228 | Protein_1207 | acetyltransferase | - |
| PT299_RS07385 (1254096) | 1254096..1254539 | + | 444 | WP_000012218.1 | transferase | - |
| PT299_RS07390 (1254541) | 1254541..1255314 | + | 774 | WP_000596084.1 | YaiO family outer membrane beta-barrel protein | - |
| PT299_RS07395 (1255502) | 1255502..1255777 | + | 276 | WP_001141271.1 | formaldehyde-responsive transcriptional repressor FrmR | - |
| PT299_RS07400 (1255812) | 1255812..1256921 | + | 1110 | WP_000842106.1 | S-(hydroxymethyl)glutathione dehydrogenase | ARG |
| PT299_RS07405 (1257015) | 1257015..1257848 | + | 834 | WP_000419081.1 | S-formylglutathione hydrolase | - |
| PT299_RS07410 (1258072) | 1258072..1258611 | - | 540 | WP_001096705.1 | DUF2058 domain-containing protein | - |
| PT299_RS07415 (1258713) | 1258713..1259924 | - | 1212 | WP_000107627.1 | 3-(3-hydroxy-phenyl)propionate transporter | - |
| PT299_RS07420 (1260088) | 1260088..1260257 | - | 170 | Protein_1216 | hypothetical protein | - |
| PT299_RS07425 (1260502) | 1260502..1261515 | - | 1014 | WP_001013499.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| PT299_RS07430 (1261505) | 1261505..1262701 | + | 1197 | Protein_1218 | Flagellar biosynthesis protein FlhA | VF |
| PT299_RS07435 (1262925) | 1262925..1263422 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| PT299_RS07440 (1263598) | 1263598..1264347 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| PT299_RS07445 (1264557) | 1264557..1264817 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| PT299_RS07450 (1264820) | 1264820..1265098 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| PT299_RS07455 (1265254) | 1265254..1265994 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| PT299_RS07460 (1265965) | 1265965..1266732 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| PT299_RS07465 (1266938) | 1266938..1267516 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| PT299_RS07470 (1267756) | 1267756..1270200 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| PT299_RS07475 (1270243) | 1270243..1270689 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| PT299_RS07480 (1270870) | 1270870..1271640 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| PT299_RS07485 (1271681) | 1271681..1271959 | - | 279 | Protein_1229 | ISAs1 family transposase | - |
| PT299_RS07490 (1271957) | 1271957..1272313 | + | 357 | Protein_1230 | hypothetical protein | - |
| PT299_RS07495 (1272323) | 1272323..1272802 | + | 480 | WP_001236645.1 | protein YkfM | - |
| PT299_RS07500 (1272939) | 1272939..1273724 | - | 786 | WP_001086141.1 | lipoprotein | - |
| PT299_RS07510 (1274261) | 1274261..1274992 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| PT299_RS07515 (1275057) | 1275057..1275524 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| PT299_RS07520 (1275521) | 1275521..1276243 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| PT299_RS07525 (1276277) | 1276277..1277032 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| PT299_RS07530 (1277104) | 1277104..1278462 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| PT299_RS07535 (1278510) | 1278510..1279106 | - | 597 | Protein_1238 | methyltransferase domain-containing protein | - |
| PT299_RS07540 (1279137) | 1279137..1279937 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| PT299_RS07545 (1280178) | 1280178..1281092 | + | 915 | WP_000648572.1 | DNA-binding transcriptional regulator YafC | - |
| PT299_RS07550 (1281089) | 1281089..1281892 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|