MGE detailed information
MGE type: Genomic_island MGE length: 20678 bp
Accession: NZ_CP117960 Location: 1629352..1650029 Organism: Escherichia coli strain B-3008 Replicon: chromosome
Accession: NZ_CP117960 Location: 1629352..1650029 Organism: Escherichia coli strain B-3008 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PT288_RS08070 (1624874) | 1624874..1625146 | + | 273 | WP_000958542.1 | flagellar biosynthetic protein FliQ | - |
| PT288_RS08075 (1625148) | 1625148..1625930 | + | 783 | WP_001260502.1 | flagellar biosynthetic protein FliR | - |
| PT288_RS08080 (1625920) | 1625920..1627059 | + | 1140 | WP_000785665.1 | flagellar type III secretion system protein FlhB | - |
| PT288_RS08085 (1627043) | 1627043..1629136 | + | 2094 | WP_001140809.1 | flagellar biosynthesis protein FlhA | - |
| PT288_RS08090 (1629352) | 1629352..1629849 | - | 498 | WP_000006261.1 | REP-associated tyrosine transposase RayT | - |
| PT288_RS08095 (1630025) | 1630025..1630798 | - | 774 | WP_001353765.1 | hypothetical protein | VF |
| PT288_RS08100 (1630984) | 1630984..1631244 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| PT288_RS08105 (1631247) | 1631247..1631525 | + | 279 | WP_000615979.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| PT288_RS08110 (1631681) | 1631681..1632421 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| PT288_RS08115 (1632392) | 1632392..1633159 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| PT288_RS08120 (1633365) | 1633365..1633943 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| PT288_RS08125 (1634183) | 1634183..1636627 | + | 2445 | WP_000973083.1 | hypothetical protein | VF |
| PT288_RS08130 (1636670) | 1636670..1637116 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| PT288_RS08135 (1637297) | 1637297..1638067 | + | 771 | WP_001118040.1 | 2-oxoglutaramate amidase | - |
| PT288_RS08140 (1638124) | 1638124..1638492 | - | 369 | Protein_1596 | ISAs1 family transposase ISEc1 | Transposase |
| PT288_RS08145 (1638538) | 1638538..1639674 | - | 1137 | Protein_1597 | ISAs1 family transposase ISEc1 | Transposase |
| PT288_RS08150 (1640420) | 1640420..1640929 | - | 510 | WP_001419315.1 | sel1 repeat family protein | - |
| PT288_RS08155 (1641313) | 1641313..1642452 | + | 1140 | Protein_1599 | IS3 family transposase ISEc14 | Transposase |
| PT288_RS08160 (1642515) | 1642515..1642760 | + | 246 | Protein_1600 | IS3 family transposase ISEhe3 | Transposase |
| PT288_RS08165 (1642828) | 1642828..1643979 | + | 1152 | Protein_1601 | IS30 family transposase IS30D | Transposase |
| PT288_RS08170 (1643986) | 1643986..1644882 | + | 897 | Protein_1602 | IS3 family transposase ISSd1 | Transposase |
| PT288_RS08175 (1644995) | 1644995..1645429 | - | 435 | WP_000723071.1 | hypothetical protein | - |
| PT288_RS08180 (1645647) | 1645647..1647047 | - | 1401 | WP_001211180.1 | copper resistance membrane spanning protein PcoS | - |
| PT288_RS08185 (1647044) | 1647044..1647724 | - | 681 | WP_001188930.1 | hypothetical protein | VF |
| PT288_RS08190 (1647779) | 1647779..1648708 | - | 930 | WP_000998778.1 | copper resistance inner membrane protein PcoD | - |
| PT288_RS08195 (1648713) | 1648713..1649093 | - | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| PT288_RS08200 (1649133) | 1649133..1650023 | - | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| PT288_RS08205 (1650029) | 1650029..1651846 | - | 1818 | WP_000925242.1 | multicopper oxidase PcoA | - |
| PT288_RS08210 (1652081) | 1652081..1652530 | + | 450 | WP_001023258.1 | hypothetical protein | - |
| PT288_RS08215 (1652819) | 1652819..1653556 | + | 738 | WP_000287502.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| PT288_RS08220 (1653590) | 1653590..1653787 | - | 198 | WP_000843494.1 | DUF2933 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|