MGE detailed information
MGE type: Genomic_island MGE length: 46041 bp
Accession: NZ_CP117959 Location: 4354739..4400779 Organism: Escherichia coli strain B-2207 Replicon: chromosome
Accession: NZ_CP117959 Location: 4354739..4400779 Organism: Escherichia coli strain B-2207 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PT284_RS21770 (4351470) | 4351470..4352189 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| PT284_RS21775 (4352186) | 4352186..4353817 | - | 1632 | WP_066009715.1 | sensor histidine kinase | - |
| PT284_RS21780 (4353998) | 4353998..4354228 | + | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| PT284_RS21785 (4354240) | 4354240..4354512 | + | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| PT284_RS21790 (4354739) | 4354739..4355035 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| PT284_RS21795 (4355063) | 4355063..4355236 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| PT284_RS21800 (4355355) | 4355355..4356872 | - | 1518 | WP_078046142.1 | lysine--tRNA ligase | - |
| PT284_RS21805 (4357109) | 4357109..4358566 | - | 1458 | WP_066009710.1 | dipeptide/tripeptide permease DtpC | - |
| PT284_RS21810 (4358625) | 4358625..4360772 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| PT284_RS21815 (4360852) | 4360852..4362186 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| PT284_RS21820 (4362551) | 4362551..4364090 | - | 1540 | Protein_4111 | lysine decarboxylation/transport transcriptional activator CadC | - |
| PT284_RS21825 (4364839) | 4364839..4365681 | - | 843 | WP_022645115.1 | DUF4942 domain-containing protein | - |
| PT284_RS21830 (4365766) | 4365766..4365960 | - | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| PT284_RS21835 (4366039) | 4366039..4366188 | - | 150 | Protein_4114 | DUF5983 family protein | - |
| PT284_RS21840 (4366185) | 4366185..4366562 | - | 378 | WP_022645116.1 | TA system toxin CbtA family protein | - |
| PT284_RS21845 (4366652) | 4366652..4367022 | - | 371 | Protein_4116 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| PT284_RS21850 (4367185) | 4367185..4367406 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| PT284_RS21855 (4367469) | 4367469..4367945 | - | 477 | WP_274270929.1 | RadC family protein | - |
| PT284_RS21860 (4367961) | 4367961..4368440 | - | 480 | WP_001564060.1 | antirestriction protein | - |
| PT284_RS21865 (4368706) | 4368706..4369524 | - | 819 | WP_001175165.1 | DUF932 domain-containing protein | - |
| PT284_RS21870 (4369614) | 4369614..4369847 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| PT284_RS21875 (4369853) | 4369853..4370530 | - | 678 | WP_001097302.1 | hypothetical protein | - |
| PT284_RS21880 (4370678) | 4370678..4371358 | - | 681 | WP_001282921.1 | WYL domain-containing protein | - |
| PT284_RS21885 (4371561) | 4371561..4372445 | - | 885 | WP_001116795.1 | YfjP family GTPase | - |
| PT284_RS21890 (4372546) | 4372546..4373769 | + | 1224 | WP_001107219.1 | hypothetical protein | - |
| PT284_RS21895 (4374932) | 4374932..4375462 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| PT284_RS21900 (4376132) | 4376132..4376863 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| PT284_RS21905 (4377385) | 4377385..4377837 | + | 453 | WP_066009063.1 | acyltransferase | - |
| PT284_RS21910 (4378373) | 4378373..4379307 | + | 935 | Protein_4129 | pseudouridine kinase | - |
| PT284_RS21915 (4379300) | 4379300..4380235 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| PT284_RS21920 (4380319) | 4380319..4381570 | + | 1252 | Protein_4131 | NupC/NupG family nucleoside CNT transporter | - |
| PT284_RS21925 (4381589) | 4381589..4382683 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| PT284_RS21930 (4383984) | 4383984..4384550 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| PT284_RS21935 (4384808) | 4384808..4385383 | + | 576 | WP_001564054.1 | hypothetical protein | - |
| PT284_RS21940 (4385452) | 4385452..4385685 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| PT284_RS21945 (4385682) | 4385682..4385807 | + | 126 | WP_001342704.1 | hypothetical protein | - |
| PT284_RS21950 (4385936) | 4385936..4385998 | + | 63 | Protein_4137 | IS3 family transposase IS2 | Transposase |
| PT284_RS21955 (4385990) | 4385990..4386250 | - | 261 | Protein_4138 | IS3 family transposase IS2 | Transposase |
| PT284_RS21960 (4386341) | 4386341..4387498 | + | 1158 | Protein_4139 | Multidrug resistance protein MdtB | VF |
| PT284_RS21965 (4387598) | 4387598..4388269 | + | 672 | WP_223350500.1 | TetR/AcrR family transcriptional regulator | - |
| PT284_RS21970 (4388400) | 4388400..4388585 | + | 186 | WP_223349228.1 | helix-turn-helix domain-containing protein | - |
| PT284_RS21975 (4388942) | 4388942..4389487 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| PT284_RS21980 (4389532) | 4389532..4390683 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| PT284_RS21985 (4390812) | 4390812..4391867 | - | 1056 | WP_000494233.1 | HTH-type transcriptional activator RhaR | VF |
| PT284_RS21990 (4391884) | 4391884..4393146 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| PT284_RS21995 (4393696) | 4393696..4394178 | - | 483 | WP_001362989.1 | reverse transcriptase domain-containing protein | - |
| PT284_RS22000 (4394245) | 4394245..4394784 | - | 540 | WP_022645120.1 | hypothetical protein | - |
| PT284_RS22005 (4395270) | 4395270..4396175 | - | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| PT284_RS22010 (4396312) | 4396312..4397229 | - | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| PT284_RS22015 (4397338) | 4397338..4399890 | - | 2553 | WP_022645121.1 | glycyl radical diol dehydratase GrpM | - |
| PT284_RS22020 (4399939) | 4399939..4400514 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| PT284_RS22025 (4400525) | 4400525..4400824 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| PT284_RS22030 (4400848) | 4400848..4402365 | - | 1518 | WP_022645122.1 | propanediol utilization system aldehyde dehydrogenase GrpJ | - |
| PT284_RS22035 (4402426) | 4402426..4403211 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| PT284_RS22040 (4403233) | 4403233..4403514 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| PT284_RS22045 (4403799) | 4403799..4404995 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| PT284_RS22050 (4405024) | 4405024..4405521 | - | 498 | WP_001301167.1 | propanediol utilization system heme-binding protein GrpF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|