MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 31750 bp
Accession: NZ_CP117881 Location: 681206..712955 Organism: Novosphingobium sp. KACC 22771 Replicon: chromosome
Accession: NZ_CP117881 Location: 681206..712955 Organism: Novosphingobium sp. KACC 22771 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQ467_RS03045 (PQ467_03045) | 676412..678226 | - | 1815 | WP_274175086.1 | phosphogluconate dehydratase | - |
| PQ467_RS03050 (PQ467_03050) | 678285..679724 | - | 1440 | WP_274176075.1 | glucose-6-phosphate dehydrogenase | - |
| PQ467_RS03055 (PQ467_03055) | 679988..681052 | - | 1065 | WP_274175087.1 | peptidylprolyl isomerase | - |
| PQ467_RS03065 (PQ467_03065) | 681359..682588 | + | 1230 | WP_274175088.1 | Prophage integrase IntS ; Integrase | Integrase |
| PQ467_RS03070 (PQ467_03070) | 682581..683582 | + | 1002 | WP_274175089.1 | hypothetical protein | - |
| PQ467_RS03075 (PQ467_03075) | 683680..685809 | + | 2130 | WP_274175090.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| PQ467_RS03080 (PQ467_03080) | 685857..688004 | + | 2148 | WP_274175091.1 | DEAD/DEAH box helicase family protein | - |
| PQ467_RS03085 (PQ467_03085) | 687967..689640 | + | 1674 | WP_274175092.1 | class I SAM-dependent DNA methyltransferase | - |
| PQ467_RS03090 (PQ467_03090) | 689637..690833 | + | 1197 | WP_274175093.1 | restriction endonuclease subunit S | - |
| PQ467_RS03095 (PQ467_03095) | 690897..692492 | + | 1596 | WP_274175094.1 | hypothetical protein | - |
| PQ467_RS03100 (PQ467_03100) | 692642..693787 | + | 1146 | WP_274175095.1 | Fic family protein | - |
| PQ467_RS03105 (PQ467_03105) | 693961..694296 | - | 336 | WP_274175096.1 | hypothetical protein | - |
| PQ467_RS03110 (PQ467_03110) | 694352..694660 | - | 309 | WP_274175097.1 | hypothetical protein | - |
| PQ467_RS03115 (PQ467_03115) | 694657..695088 | - | 432 | WP_274175098.1 | hypothetical protein | - |
| PQ467_RS03120 (PQ467_03120) | 695263..697224 | + | 1962 | WP_274175099.1 | AAA family ATPase | - |
| PQ467_RS03125 (PQ467_03125) | 697225..699078 | + | 1854 | WP_274175100.1 | ATP-dependent helicase | - |
| PQ467_RS03130 (PQ467_03130) | 699382..700905 | - | 1524 | WP_274173092.1 | IS66 family transposase ISNisp6 | Transposase |
| PQ467_RS03135 (PQ467_03135) | 700937..701263 | - | 327 | WP_274173093.1 | IS66 family transposase ISAzca2 | Transposase |
| PQ467_RS03140 (PQ467_03140) | 701290..701715 | - | 426 | WP_274173094.1 | IS66 family transposase ISFpe1 | Transposase |
| PQ467_RS03145 (PQ467_03145) | 702018..702221 | + | 204 | WP_274175101.1 | AlpA family phage regulatory protein | - |
| PQ467_RS03150 (PQ467_03150) | 702250..703263 | + | 1014 | WP_274175102.1 | hypothetical protein | - |
| PQ467_RS03155 (PQ467_03155) | 703589..704278 | + | 690 | WP_274175103.1 | ribbon-helix-helix domain-containing protein | - |
| PQ467_RS03160 (PQ467_03160) | 704275..707298 | + | 3024 | WP_274175104.1 | MobF family relaxase | - |
| PQ467_RS03165 (PQ467_03165) | 707433..707645 | + | 213 | WP_274176076.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PQ467_RS03170 (PQ467_03170) | 707645..708958 | + | 1314 | WP_274175105.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| PQ467_RS03175 (PQ467_03175) | 708962..709876 | - | 915 | WP_274175106.1 | HNH endonuclease | - |
| PQ467_RS03180 (PQ467_03180) | 709944..710657 | + | 714 | WP_274175107.1 | hypothetical protein | - |
| PQ467_RS03185 (PQ467_03185) | 710659..712626 | - | 1968 | WP_274175108.1 | hypothetical protein ; Integrase | Integrase |
| PQ467_RS03190 (PQ467_03190) | 712927..713370 | - | 444 | WP_274175109.1 | hypothetical protein | - |
| PQ467_RS03195 (PQ467_03195) | 713435..716887 | - | 3453 | WP_274175110.1 | type VI secretion system membrane subunit TssM | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|