MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 8729 bp
Accession: NZ_CP117874 Location: 566406..575134 Organism: Pectobacterium carotovorum subsp. carotovorum strain ZJ-4-2 Replicon: chromosome
Accession: NZ_CP117874 Location: 566406..575134 Organism: Pectobacterium carotovorum subsp. carotovorum strain ZJ-4-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSR30_RS02490 (PSR30_02490) | 561922..562707 | + | 786 | WP_274214766.1 | phosphonate metabolism protein PhnP | - |
| PSR30_RS02495 (PSR30_02495) | 563171..565000 | + | 1830 | WP_274214767.1 | P-loop NTPase fold protein | - |
| PSR30_RS02500 (PSR30_02500) | 565131..565373 | - | 243 | Protein_483 | type II toxin-antitoxin system CcdA family antitoxin | - |
| PSR30_RS02505 (PSR30_02505) | 565388..565636 | - | 249 | WP_274214768.1 | helix-turn-helix transcriptional regulator | - |
| PSR30_RS02510 (PSR30_02510) | 565721..565975 | - | 255 | WP_274214770.1 | helix-turn-helix transcriptional regulator | - |
| PSR30_RS02515 (PSR30_02515) | 566080..566322 | + | 243 | WP_274214771.1 | helix-turn-helix transcriptional regulator | - |
| PSR30_RS02520 (PSR30_02520) | 566662..566955 | + | 294 | WP_274214772.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PSR30_RS02525 (PSR30_02525) | 566952..567440 | + | 489 | WP_274214773.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PSR30_RS02530 (PSR30_02530) | 567753..568637 | + | 885 | WP_010299620.1 | ParA family protein | - |
| PSR30_RS02535 (PSR30_02535) | 568634..569035 | + | 402 | WP_274214774.1 | hypothetical protein | - |
| PSR30_RS02540 (PSR30_02540) | 569528..570889 | - | 1362 | WP_029368129.1 | hypothetical protein | - |
| PSR30_RS02545 (PSR30_02545) | 571227..571973 | - | 747 | WP_274214775.1 | MobC family replication-relaxation protein | - |
| PSR30_RS02550 (PSR30_02550) | 572110..572280 | + | 171 | WP_165572483.1 | hypothetical protein | - |
| PSR30_RS02555 (PSR30_02555) | 572882..573223 | - | 342 | WP_274214776.1 | hypothetical protein | - |
| PSR30_RS02560 (PSR30_02560) | 573409..573603 | + | 195 | WP_012773549.1 | YlcI/YnfO family protein | - |
| PSR30_RS02565 (PSR30_02565) | 573698..574957 | - | 1260 | WP_274214777.1 | Prophage integrase IntS ; Integrase | Integrase |
| PSR30_RS02575 (PSR30_02575) | 575366..576211 | + | 846 | WP_274214778.1 | AraC family transcriptional regulator | - |
| PSR30_RS02580 (PSR30_02580) | 576247..576837 | + | 591 | WP_274214779.1 | LysE family translocator | - |
| PSR30_RS02585 (PSR30_02585) | 576834..577409 | - | 576 | WP_274214780.1 | transcriptional regulator | - |
| PSR30_RS02590 (PSR30_02590) | 577648..579381 | - | 1734 | WP_274214781.1 | protein-disulfide reductase DsbD | - |
| PSR30_RS02595 (PSR30_02595) | 579357..579689 | - | 333 | WP_039543263.1 | divalent cation tolerance protein CutA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|