MGE detailed information
MGE type: Genomic_island MGE length: 28568 bp
Accession: NZ_CP117874 Location: 1716286..1744853 Organism: Pectobacterium carotovorum subsp. carotovorum strain ZJ-4-2 Replicon: chromosome
Accession: NZ_CP117874 Location: 1716286..1744853 Organism: Pectobacterium carotovorum subsp. carotovorum strain ZJ-4-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSR30_RS07580 (PSR30_07580) | 1712053..1712925 | + | 873 | WP_274215431.1 | formylglycine-generating enzyme family protein | - |
| PSR30_RS07585 (PSR30_07585) | 1713087..1714076 | + | 990 | WP_274215167.1 | aldo/keto reductase | - |
| PSR30_RS07590 (PSR30_07590) | 1714122..1714913 | - | 792 | WP_274215168.1 | SDR family oxidoreductase | - |
| PSR30_RS07595 (PSR30_07595) | 1715365..1716255 | + | 891 | WP_119158536.1 | LysR family transcriptional regulator | - |
| PSR30_RS07600 (PSR30_07600) | 1716286..1716879 | - | 594 | WP_274215169.1 | flavodoxin | - |
| PSR30_RS07605 (PSR30_07605) | 1716932..1718131 | - | 1200 | WP_274215170.1 | multidrug effflux MFS transporter | - |
| PSR30_RS07610 (PSR30_07610) | 1718300..1719535 | - | 1236 | WP_039506797.1 | Putative multidrug resistance protein MdtD | VF |
| PSR30_RS07615 (PSR30_07615) | 1719602..1720048 | + | 447 | WP_039506798.1 | helix-turn-helix domain-containing protein | - |
| PSR30_RS07620 (PSR30_07620) | 1720261..1721697 | + | 1437 | WP_274215171.1 | 6-phospho-beta-glucosidase | - |
| PSR30_RS07625 (PSR30_07625) | 1721820..1722695 | - | 876 | WP_039506801.1 | LysR family transcriptional regulator | - |
| PSR30_RS07630 (PSR30_07630) | 1722803..1723390 | + | 588 | WP_274215172.1 | cysteine/O-acetylserine transporter | - |
| PSR30_RS07635 (PSR30_07635) | 1723646..1724128 | + | 483 | WP_039506803.1 | cold shock domain-containing protein | - |
| PSR30_RS07640 (PSR30_07640) | 1724305..1724844 | + | 540 | WP_010298734.1 | DUF2058 domain-containing protein | - |
| PSR30_RS07645 (PSR30_07645) | 1725156..1725914 | + | 759 | WP_039544260.1 | isocitrate lyase/phosphoenolpyruvate mutase family protein | - |
| PSR30_RS07650 (PSR30_07650) | 1725914..1726975 | + | 1062 | WP_039544263.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| PSR30_RS07655 (PSR30_07655) | 1727026..1728735 | - | 1710 | WP_274215432.1 | diguanylate cyclase DgcJ | - |
| PSR30_RS07660 (PSR30_07660) | 1728771..1729016 | + | 246 | WP_039506805.1 | YmjA family protein | - |
| PSR30_RS07665 (PSR30_07665) | 1729241..1730272 | - | 1032 | WP_039357231.1 | methionine synthase | - |
| PSR30_RS07670 (PSR30_07670) | 1730303..1731280 | - | 978 | WP_138255518.1 | DUF1852 domain-containing protein | - |
| PSR30_RS07675 (PSR30_07675) | 1731778..1732122 | - | 345 | WP_274215173.1 | gamma-glutamylcyclotransferase family protein | - |
| PSR30_RS07680 (PSR30_07680) | 1732428..1733630 | + | 1203 | WP_274215174.1 | tyrosine--tRNA ligase | - |
| PSR30_RS07685 (PSR30_07685) | 1733755..1734645 | + | 891 | WP_274215175.1 | oxidoreductase | - |
| PSR30_RS07690 (PSR30_07690) | 1735003..1736853 | - | 1851 | WP_199689747.1 | UvrD-helicase domain-containing protein | - |
| PSR30_RS07695 (PSR30_07695) | 1736843..1738714 | - | 1872 | WP_039473476.1 | AAA family ATPase | - |
| PSR30_RS07700 (PSR30_07700) | 1739484..1739874 | + | 391 | Protein_1498 | ArdC family protein | - |
| PSR30_RS07705 (PSR30_07705) | 1740035..1740271 | + | 237 | WP_039473880.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PSR30_RS07710 (PSR30_07710) | 1740274..1740588 | + | 315 | WP_039360030.1 | CcdB family protein | Toxin Detail |
| PSR30_RS07720 (PSR30_07720) | 1741250..1742047 | - | 798 | WP_010307981.1 | DgsA anti-repressor MtfA | - |
| PSR30_RS07730 (PSR30_07730) | 1742289..1742675 | - | 387 | WP_274215176.1 | lysozyme inhibitor LprI family protein | - |
| PSR30_RS07735 (PSR30_07735) | 1742746..1742887 | - | 142 | Protein_1503 | IS5/IS1182 family transposase | - |
| PSR30_RS07740 (PSR30_07740) | 1743062..1744483 | - | 1422 | WP_274215177.1 | hypothetical protein | - |
| PSR30_RS07745 (PSR30_07745) | 1744620..1744853 | + | 234 | WP_274215178.1 | hypothetical protein | - |
| PSR30_RS07750 (PSR30_07750) | 1744908..1745330 | + | 423 | WP_274215179.1 | DUF2946 domain-containing protein | - |
| PSR30_RS07755 (PSR30_07755) | 1745445..1747457 | + | 2013 | WP_274215180.1 | TonB-dependent copper receptor | - |
| PSR30_RS07760 (PSR30_07760) | 1747657..1747824 | + | 168 | WP_010280855.1 | YqaE/Pmp3 family membrane protein | - |
| PSR30_RS07765 (PSR30_07765) | 1747911..1749332 | - | 1422 | WP_039473469.1 | DASS family sodium-coupled anion symporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|