MGE detailed information
MGE type: IScluster/Tn MGE length: 19815 bp
Accession: NZ_CP117859 Location: 94802..114616 Organism: Komagataeibacter oboediens strain NCIB 8034 Replicon: plasmid pKOB1
Accession: NZ_CP117859 Location: 94802..114616 Organism: Komagataeibacter oboediens strain NCIB 8034 Replicon: plasmid pKOB1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LV478_RS01385 (LV478_01390) | 90088..91332 | - | 1245 | WP_275877894.1 | type II toxin-antitoxin system HipA family toxin | - |
| LV478_RS01390 (LV478_01395) | 91322..91921 | - | 600 | WP_025440202.1 | helix-turn-helix transcriptional regulator | - |
| LV478_RS01395 (LV478_01400) | 92344..92583 | + | 240 | WP_275877895.1 | hypothetical protein | - |
| LV478_RS01400 (LV478_01405) | 92584..92709 | + | 126 | Protein_87 | resolvase | - |
| LV478_RS01405 (LV478_01410) | 92938..94377 | - | 1440 | WP_275877896.1 | hypothetical protein | - |
| LV478_RS01410 (LV478_01415) | 94457..94780 | - | 324 | Protein_89 | transposase | - |
| LV478_RS01415 (LV478_01420) | 94802..95416 | - | 615 | WP_130732967.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| LV478_RS01420 (LV478_01425) | 95542..95985 | + | 444 | Protein_91 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LV478_RS01425 (LV478_01430) | 95981..96970 | - | 990 | Protein_92 | IS481 family transposase | - |
| LV478_RS01430 (LV478_01435) | 97065..97421 | - | 357 | Protein_93 | IS6 family transposase IS6100 | Transposase |
| LV478_RS01435 (LV478_01440) | 97528..98949 | - | 1422 | WP_210350574.1 | adenylosuccinate lyase family protein | - |
| LV478_RS01440 (LV478_01445) | 99245..99961 | + | 717 | WP_275877897.1 | IS6 family transposase IS6100 | Transposase |
| LV478_RS01445 (LV478_01450) | 100061..100456 | - | 396 | WP_275877898.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| LV478_RS01450 (LV478_01455) | 100453..100680 | - | 228 | WP_014106734.1 | transcriptional regulator | - |
| LV478_RS01455 (LV478_01460) | 100882..102027 | - | 1146 | Protein_98 | Tn3 family transposase TnpA_ISMpo10 | Transposase |
| LV478_RS01460 (LV478_01465) | 102029..103018 | - | 990 | Protein_99 | IS481 family transposase | - |
| LV478_RS01465 (LV478_01470) | 103107..103991 | - | 885 | Protein_100 | Tn3 family transposase TnpA_ISMpo10 | Transposase |
| LV478_RS01470 (LV478_01475) | 103995..104399 | - | 405 | WP_081472688.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| LV478_RS01475 (LV478_01480) | 104449..105480 | + | 1032 | WP_275877899.1 | IS110 family transposase ISCc4 | Transposase |
| LV478_RS01480 (LV478_01485) | 105820..106029 | - | 210 | Protein_103 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| LV478_RS01485 (LV478_01490) | 106222..106962 | + | 741 | Protein_104 | OB-fold nucleic acid binding domain-containing protein | - |
| LV478_RS01490 (LV478_01495) | 107403..107510 | - | 108 | WP_275877900.1 | helix-turn-helix domain-containing protein | - |
| LV478_RS01495 (LV478_01500) | 107686..109029 | - | 1344 | WP_034926246.1 | IS1380 family transposase ISNha3 | Transposase |
| LV478_RS01500 (LV478_01505) | 109101..109604 | - | 504 | WP_275877901.1 | recombinase family protein | - |
| LV478_RS01505 (LV478_01510) | 109669..110013 | - | 345 | WP_130732983.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LV478_RS01510 (LV478_01515) | 110006..110269 | - | 264 | WP_130732982.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LV478_RS01515 (LV478_01520) | 110331..110519 | - | 189 | WP_130732981.1 | hypothetical protein | - |
| LV478_RS01520 (LV478_01525) | 110697..111056 | - | 360 | WP_248705407.1 | hypothetical protein | - |
| LV478_RS01525 (LV478_01530) | 111181..111623 | + | 443 | Protein_112 | IS5 family transposase ISPak1 | Transposase |
| LV478_RS01535 (LV478_01540) | 113202..114218 | - | 1017 | WP_275877902.1 | IS110 family transposase ISAzs4 | Transposase |
| LV478_RS01540 (LV478_01545) | 114299..114616 | + | 318 | Protein_115 | IS5 family transposase ISPak1 | Transposase |
| LV478_RS01545 (LV478_01550) | 115011..115478 | + | 468 | WP_275877903.1 | hypothetical protein | - |
| LV478_RS01550 (LV478_01555) | 115524..118040 | + | 2517 | WP_275877904.1 | TonB-dependent receptor | - |
| LV478_RS01555 (LV478_01560) | 118449..119132 | - | 684 | WP_275877905.1 | MucR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|